RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 TRIM2Q9C040 744 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.62□□□□□ -1.67
BRCA1-204ENST00000412061 KIF9Q9HAQ2 790 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 IL17RBQ9NRM6 502 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 SIRT3Q9NTG7 399 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-204ENST00000412061 ABCB8Q9NUT2 735 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 SETD4Q9NVD3 440 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 TLK1Q9UKI8 766 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 HEMK1Q9Y5R4 338 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-204ENST00000412061 ATAD2BQ9ULI0 1458 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 SPAG9O60271 1321 aaKnown RBP4.61□□□□□ -1.67
BRCA1-204ENST00000412061 A0A087X1B8 175 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 LOC102723996A0A087X1L8 192 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 TCRBV5S1A1TA0A578 114 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 C17orf100A8MU93 164 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 POC1B-GALNT4F8VUJ3 575 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 RAMP2O60895 175 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 MITFO75030 526 aaPredicted RBP4.61□□□□□ -1.67
BRCA1-204ENST00000412061 USP12O75317 370 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 NDUFS3O75489 264 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 REC8O95072 547 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 SRPRAP08240 638 aaKnown RBP4.61□□□□□ -1.67
BRCA1-204ENST00000412061 CASTP20810 708 aaKnown RBP4.61□□□□□ -1.67
BRCA1-204ENST00000412061 PTPN3P26045 913 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 PON1P27169 355 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 HOXA13P31271 388 aaPredicted RBP4.61□□□□□ -1.67
BRCA1-204ENST00000412061 PTPN9P43378 593 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 NT5C2P49902 561 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 RAB28P51157 221 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 ZNF132P52740 706 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 RALGDSQ12967 914 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 TRIM29Q14134 588 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 ZNF273Q14593 569 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 ANKRD20A4Q4UJ75 823 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 ANKRD20A8PQ5CZ79 823 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 ANKRD20A2Q5SQ80 823 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 ANKRD20A1Q5TYW2 823 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 ANKRD20A3Q5VUR7 823 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 RABEPKQ7Z6M1 372 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 DSG4Q86SJ6 1040 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 MRGPRGQ86SM5 289 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 GPAT4Q86UL3 456 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 IQCHQ86VS3 1027 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 TBC1D21Q8IYX1 336 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 MMP21Q8N119 569 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 Q8N1X5 172 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 ZBTB44Q8NCP5 570 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 DNAAF1Q8NEP3 725 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 NSMCE1Q8WV22 266 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 TEKT4Q8WW24 435 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 CORO2AQ92828 525 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 HDAC11Q96DB2 347 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 GPR78Q96P69 363 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 H2AFJQ9BTM1 129 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 KRT23Q9C075 422 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 SLC5A7Q9GZV3 580 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 NUAK2Q9H093 628 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 PDZD7Q9H5P4 517 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 MRPL44Q9H9J2 332 aaKnown RBP4.61□□□□□ -1.67
BRCA1-204ENST00000412061 RANGRFQ9HD47 186 aaPredicted RBP4.61□□□□□ -1.67
BRCA1-204ENST00000412061 SLC6A13Q9NSD5 602 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 PSD3Q9NYI0 1048 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 CTNNAL1Q9UBT7 734 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 FETUBQ9UGM5 382 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 ARMCX3Q9UH62 379 aaPredicted RBP4.61□□□□□ -1.67
BRCA1-204ENST00000412061 CPSF3Q9UKF6 684 aaKnown RBP4.61□□□□□ -1.67
BRCA1-204ENST00000412061 ADAM21Q9UKJ8 722 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 PCDHGA5Q9Y5G8 931 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 PCDHGA1Q9Y5H4 931 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 WNT6Q9Y6F9 365 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 IKBKGQ9Y6K9 419 aa4.61□□□□□ -1.67
BRCA1-204ENST00000412061 SPATA31A5Q5VU36 1347 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 SPATA31A6Q5VVP1 1343 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 SPATA31A7Q8IWB4 1347 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 LRRC72A6NJI9 287 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 TARM1B6A8C7 271 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 USP17L23D6RBM5 183 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 RTN2O75298 545 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 SLC25A12O75746 678 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 BCAS2O75934 225 aaPredicted RBP4.6□□□□□ -1.67
BRCA1-204ENST00000412061 CNTN5O94779 1100 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 INHBAP08476 426 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 ALDOCP09972 364 aaKnown RBP4.6□□□□□ -1.67
BRCA1-204ENST00000412061 CYP2A6P11509 494 aaPredicted RBP4.6□□□□□ -1.67
BRCA1-204ENST00000412061 AGAP20933 346 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 TNFRSF8P28908 595 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 ZNF84P51523 738 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 GPC3P51654 580 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 STARD6P59095 220 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 SHC2P98077 582 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 B4GALNT1Q00973 533 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 DMWDQ09019 674 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 OLIG2Q13516 323 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 CAPSQ13938 189 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 FGFBP1Q14512 234 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 VEPH1Q14D04 833 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 PFKFB3Q16875 520 aaPredicted RBP4.6□□□□□ -1.67
BRCA1-204ENST00000412061 ALG11Q2TAA5 492 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 COL28A1Q2UY09 1125 aa4.6□□□□□ -1.67
BRCA1-204ENST00000412061 EDRF1Q3B7T1 1238 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms