RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 TRIM67Q6ZTA4 783 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 RTL10Q7L3V2 364 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 OR7D4Q8NG98 312 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 RP9Q8TA86 221 aaKnown RBP13.59□□□□□ -0.23
LIMS1-205ENST00000410093 L3HYPDHQ96EM0 354 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 CDKN2AIPNLQ96HQ2 116 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 TDRD1Q9BXT4 1180 aaKnown RBP13.59□□□□□ -0.23
LIMS1-205ENST00000410093 MUC3BQ9H195 1237 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 CCDC68Q9H2F9 335 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 PLA2G4CQ9UP65 541 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 YBX2Q9Y2T7 364 aaKnown RBP13.59□□□□□ -0.23
LIMS1-205ENST00000410093 C15orf41Q9Y2V0 281 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 INSL5Q9Y5Q6 135 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 RGSL1A5PLK6 1076 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 H7C0S8 307 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 FKBP6O75344 327 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 GOT2P00505 430 aaKnown RBP13.59□□□□□ -0.23
LIMS1-205ENST00000410093 PYGLP06737 847 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 TPBGLP0DKB5 382 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 MBL2P11226 248 aaPredicted RBP13.59□□□□□ -0.23
LIMS1-205ENST00000410093 NCF2P19878 526 aaPredicted RBP13.59□□□□□ -0.23
LIMS1-205ENST00000410093 IMPDH1P20839 514 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 IGFBP4P22692 258 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 GLRBP48167 497 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 CSNK1DP48730 415 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 TTPAP49638 278 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 ZNF140P52738 457 aaPredicted RBP13.59□□□□□ -0.23
LIMS1-205ENST00000410093 ATP6V0D1P61421 351 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 WDR5P61964 334 aaKnown RBP13.59□□□□□ -0.23
LIMS1-205ENST00000410093 AP1S1P61966 158 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 RPS24P62847 133 aaKnown RBP13.59□□□□□ -0.23
LIMS1-205ENST00000410093 TWF1Q12792 350 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 CSHL1Q14406 222 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 IHHQ14623 411 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 CYTH1Q15438 398 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 RNF219Q5W0B1 726 aaPredicted RBP13.59□□□□□ -0.23
LIMS1-205ENST00000410093 RAB44Q7Z6P3 723 aaPredicted RBP13.59□□□□□ -0.23
LIMS1-205ENST00000410093 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.59□□□□□ -0.23
LIMS1-205ENST00000410093 CPXM2Q8N436 756 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 ACDQ96AP0 544 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 RMDN1Q96DB5 314 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 MYEOVQ96EZ4 313 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 PRR11Q96HE9 360 aaPredicted RBP13.59□□□□□ -0.23
LIMS1-205ENST00000410093 RSRC1Q96IZ7 334 aaKnown RBP13.59□□□□□ -0.23
LIMS1-205ENST00000410093 TBATAQ96M53 351 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 OLFM1Q99784 485 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 POMKQ9H5K3 350 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 TFB2MQ9H5Q4 396 aaKnown RBP13.59□□□□□ -0.23
LIMS1-205ENST00000410093 BCAP29Q9UHQ4 241 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 COL6A3P12111 3177 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.58□□□□□ -0.24
LIMS1-205ENST00000410093 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.58□□□□□ -0.24
LIMS1-205ENST00000410093 E2F8A0AVK6 867 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 CCDC162PA2VCL2 907 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 ANKRD66B4E2M5 251 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 H0Y626 953 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 GFRA2O00451 464 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 LUC7L3O95232 432 aaKnown RBP13.58□□□□□ -0.24
LIMS1-205ENST00000410093 C1RP00736 705 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 F11P03951 625 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 CA3P07451 260 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 MYOGP15173 224 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 CPOXP36551 454 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 PPARGP37231 505 aaPredicted RBP13.58□□□□□ -0.24
LIMS1-205ENST00000410093 SCNN1BP51168 640 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 ARSDP51689 593 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 CLCN4P51793 760 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 GTF2A1P52655 376 aaPredicted RBP13.58□□□□□ -0.24
LIMS1-205ENST00000410093 ADARP55265 1226 aaKnown RBP13.58□□□□□ -0.24
LIMS1-205ENST00000410093 DLG1Q12959 904 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 USP4Q13107 963 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 KLF10Q13118 480 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 UBAP2LQ14157 1087 aaKnown RBP13.58□□□□□ -0.24
LIMS1-205ENST00000410093 RBM20Q5T481 1227 aaKnown RBP13.58□□□□□ -0.24
LIMS1-205ENST00000410093 CXorf57Q6NSI4 855 aaKnown RBP13.58□□□□□ -0.24
LIMS1-205ENST00000410093 RETSATQ6NUM9 610 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 AAGABQ6PD74 315 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 CCDC149Q6ZUS6 474 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 GLT6D1Q7Z4J2 308 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 STK40Q8N2I9 435 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 DCAF4L2Q8NA75 395 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 CEP70Q8NHQ1 597 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 ACTRT2Q8TDY3 377 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 JADE3Q92613 823 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 MAELQ96JY0 434 aaKnown RBP13.58□□□□□ -0.24
LIMS1-205ENST00000410093 DNAJC1Q96KC8 554 aaKnown RBP13.58□□□□□ -0.24
LIMS1-205ENST00000410093 AARSD1Q9BTE6 412 aaKnown RBP13.58□□□□□ -0.24
LIMS1-205ENST00000410093 RNF38Q9H0F5 515 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 TAS2R13Q9NYV9 303 aa13.58□□□□□ -0.24
LIMS1-205ENST00000410093 STX18Q9P2W9 335 aaKnown RBP13.58□□□□□ -0.24
LIMS1-205ENST00000410093 PRPF19Q9UMS4 504 aaKnown RBP13.58□□□□□ -0.24
LIMS1-205ENST00000410093 SOBPA7XYQ1 873 aa13.57□□□□□ -0.24
LIMS1-205ENST00000410093 SYCE1LA8MT33 242 aa13.57□□□□□ -0.24
LIMS1-205ENST00000410093 CBX4O00257 560 aa13.57□□□□□ -0.24
LIMS1-205ENST00000410093 GRID2O43424 1007 aa13.57□□□□□ -0.24
LIMS1-205ENST00000410093 CCNT2O60583 730 aaKnown RBP13.57□□□□□ -0.24
LIMS1-205ENST00000410093 FGF19O95750 216 aa13.57□□□□□ -0.24
LIMS1-205ENST00000410093 GNAZP19086 355 aa13.57□□□□□ -0.24
LIMS1-205ENST00000410093 ACTR3P61158 418 aa13.57□□□□□ -0.24
LIMS1-205ENST00000410093 SLC7A9P82251 487 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms