RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 FANCGO15287 622 aa22.38■■□□□ 1.17
PTCD3-203ENST00000409783 MAGEC1O60732 1142 aa22.38■■□□□ 1.17
PTCD3-203ENST00000409783 CLDN7O95471 211 aa22.38■■□□□ 1.17
PTCD3-203ENST00000409783 CER1O95813 267 aa22.38■■□□□ 1.17
PTCD3-203ENST00000409783 ITGAVP06756 1048 aa22.38■■□□□ 1.17
PTCD3-203ENST00000409783 C1SP09871 688 aa22.38■■□□□ 1.17
PTCD3-203ENST00000409783 ZNF30P17039 623 aa22.38■■□□□ 1.17
PTCD3-203ENST00000409783 STIP1P31948 543 aaKnown RBP22.38■■□□□ 1.17
PTCD3-203ENST00000409783 ADRA1AP35348 466 aa22.38■■□□□ 1.17
PTCD3-203ENST00000409783 STC1P52823 247 aa22.38■■□□□ 1.17
PTCD3-203ENST00000409783 SNX1Q13596 522 aa22.38■■□□□ 1.17
PTCD3-203ENST00000409783 ARHGEF7Q14155 803 aa22.38■■□□□ 1.17
PTCD3-203ENST00000409783 SHBQ15464 509 aa22.38■■□□□ 1.17
PTCD3-203ENST00000409783 PRAMEF14Q5SWL7 426 aa22.38■■□□□ 1.17
PTCD3-203ENST00000409783 RFLNAQ6ZTI6 216 aa22.38■■□□□ 1.17
PTCD3-203ENST00000409783 PTAR1Q7Z6K3 402 aaPredicted RBP22.38■■□□□ 1.17
PTCD3-203ENST00000409783 PELI3Q8N2H9 469 aa22.38■■□□□ 1.17
PTCD3-203ENST00000409783 C17orf53Q8N3J3 647 aaPredicted RBP22.38■■□□□ 1.17
PTCD3-203ENST00000409783 PRELID2Q8N945 189 aa22.38■■□□□ 1.17
PTCD3-203ENST00000409783 PLA2G15Q8NCC3 412 aa22.38■■□□□ 1.17
PTCD3-203ENST00000409783 EID2BQ96D98 161 aa22.38■■□□□ 1.17
PTCD3-203ENST00000409783 DTD2Q96FN9 168 aa22.38■■□□□ 1.17
PTCD3-203ENST00000409783 IFT43Q96FT9 208 aa22.38■■□□□ 1.17
PTCD3-203ENST00000409783 GDF3Q9NR23 364 aa22.38■■□□□ 1.17
PTCD3-203ENST00000409783 DLL3Q9NYJ7 618 aa22.38■■□□□ 1.17
PTCD3-203ENST00000409783 SPTBN4Q9H254 2564 aa22.38■■□□□ 1.17
PTCD3-203ENST00000409783 GOLGA8CPA6NN73 597 aa22.37■■□□□ 1.17
PTCD3-203ENST00000409783 ANXA9O76027 345 aa22.37■■□□□ 1.17
PTCD3-203ENST00000409783 METTL18O95568 372 aa22.37■■□□□ 1.17
PTCD3-203ENST00000409783 ZNF883P0CG24 379 aa22.37■■□□□ 1.17
PTCD3-203ENST00000409783 ETV3P41162 512 aa22.37■■□□□ 1.17
PTCD3-203ENST00000409783 CHRNA4P43681 627 aa22.37■■□□□ 1.17
PTCD3-203ENST00000409783 RABIFP47224 123 aa22.37■■□□□ 1.17
PTCD3-203ENST00000409783 GEMP55040 296 aa22.37■■□□□ 1.17
PTCD3-203ENST00000409783 GNG11P61952 73 aa22.37■■□□□ 1.17
PTCD3-203ENST00000409783 DENND2CQ68D51 928 aa22.37■■□□□ 1.17
PTCD3-203ENST00000409783 Q6ZVL8 140 aa22.37■■□□□ 1.17
PTCD3-203ENST00000409783 IPMKQ8NFU5 416 aa22.37■■□□□ 1.17
PTCD3-203ENST00000409783 ELF4Q99607 663 aaPredicted RBP22.37■■□□□ 1.17
PTCD3-203ENST00000409783 MAGEE1Q9HCI5 957 aa22.37■■□□□ 1.17
PTCD3-203ENST00000409783 ZNF148Q9UQR1 794 aa22.37■■□□□ 1.17
PTCD3-203ENST00000409783 DRG1Q9Y295 367 aaKnown RBP22.37■■□□□ 1.17
PTCD3-203ENST00000409783 SCN8AQ9UQD0 1980 aa22.37■■□□□ 1.17
PTCD3-203ENST00000409783 A0A1B0GTQ1 180 aa22.36■■□□□ 1.17
PTCD3-203ENST00000409783 CES2O00748 559 aa22.36■■□□□ 1.17
PTCD3-203ENST00000409783 PIRTP0C851 137 aa22.36■■□□□ 1.17
PTCD3-203ENST00000409783 CD59P13987 128 aa22.36■■□□□ 1.17
PTCD3-203ENST00000409783 INPP5AQ14642 412 aa22.36■■□□□ 1.17
PTCD3-203ENST00000409783 SLC1A5Q15758 541 aa22.36■■□□□ 1.17
PTCD3-203ENST00000409783 PARP6Q2NL67 630 aa22.36■■□□□ 1.17
PTCD3-203ENST00000409783 P3H1Q32P28 736 aa22.36■■□□□ 1.17
PTCD3-203ENST00000409783 SIRPB2Q5JXA9 342 aa22.36■■□□□ 1.17
PTCD3-203ENST00000409783 KCTD11Q693B1 232 aa22.36■■□□□ 1.17
PTCD3-203ENST00000409783 RANBP10Q6VN20 620 aa22.36■■□□□ 1.17
PTCD3-203ENST00000409783 DCP2Q8IU60 420 aaKnown RBP22.36■■□□□ 1.17
PTCD3-203ENST00000409783 GLIS1Q8NBF1 620 aa22.36■■□□□ 1.17
PTCD3-203ENST00000409783 NUS1Q96E22 293 aa22.36■■□□□ 1.17
PTCD3-203ENST00000409783 KCTD5Q9NXV2 234 aa22.36■■□□□ 1.17
PTCD3-203ENST00000409783 SMARCAL1Q9NZC9 954 aa22.36■■□□□ 1.17
PTCD3-203ENST00000409783 CDV3Q9UKY7 258 aaKnown RBP22.36■■□□□ 1.17
PTCD3-203ENST00000409783 SPO11Q9Y5K1 396 aa22.36■■□□□ 1.17
PTCD3-203ENST00000409783 C1orf232A0A0U1RR37 186 aa22.35■■□□□ 1.17
PTCD3-203ENST00000409783 SPTY2D1-AS1A0A0U1RR47 76 aa22.35■■□□□ 1.17
PTCD3-203ENST00000409783 K7ESM1 405 aa22.35■■□□□ 1.17
PTCD3-203ENST00000409783 TOR1BO14657 336 aa22.35■■□□□ 1.17
PTCD3-203ENST00000409783 DFNA5O60443 496 aa22.35■■□□□ 1.17
PTCD3-203ENST00000409783 AGTP01019 485 aa22.35■■□□□ 1.17
PTCD3-203ENST00000409783 TRIM23P36406 574 aa22.35■■□□□ 1.17
PTCD3-203ENST00000409783 RXRGP48443 463 aa22.35■■□□□ 1.17
PTCD3-203ENST00000409783 YPEL5P62699 121 aa22.35■■□□□ 1.17
PTCD3-203ENST00000409783 MTM1Q13496 603 aa22.35■■□□□ 1.17
PTCD3-203ENST00000409783 OLIG2Q13516 323 aa22.35■■□□□ 1.17
PTCD3-203ENST00000409783 FZD2Q14332 565 aa22.35■■□□□ 1.17
PTCD3-203ENST00000409783 UAP1L1Q3KQV9 507 aa22.35■■□□□ 1.17
PTCD3-203ENST00000409783 PAPD7Q5XG87 772 aaKnown RBP22.35■■□□□ 1.17
PTCD3-203ENST00000409783 ESRP1Q6NXG1 681 aaKnown RBP22.35■■□□□ 1.17
PTCD3-203ENST00000409783 DBX2Q6ZNG2 339 aa22.35■■□□□ 1.17
PTCD3-203ENST00000409783 ARHGEF18Q6ZSZ5 1173 aa22.35■■□□□ 1.17
PTCD3-203ENST00000409783 LYSMD3Q7Z3D4 306 aa22.35■■□□□ 1.17
PTCD3-203ENST00000409783 PRUNE1Q86TP1 453 aa22.35■■□□□ 1.17
PTCD3-203ENST00000409783 RAVER1Q8IY67 606 aaKnown RBP22.35■■□□□ 1.17
PTCD3-203ENST00000409783 ACTRT1Q8TDG2 376 aa22.35■■□□□ 1.17
PTCD3-203ENST00000409783 ABCG8Q9H221 673 aa22.35■■□□□ 1.17
PTCD3-203ENST00000409783 CAAP1Q9H8G2 361 aa22.35■■□□□ 1.17
PTCD3-203ENST00000409783 TM7SF3Q9NS93 570 aa22.35■■□□□ 1.17
PTCD3-203ENST00000409783 AAR2Q9Y312 384 aaKnown RBP22.35■■□□□ 1.17
PTCD3-203ENST00000409783 TDRD6O60522 2096 aaKnown RBP22.35■■□□□ 1.17
PTCD3-203ENST00000409783 LRP4O75096 1905 aa22.34■■□□□ 1.17
PTCD3-203ENST00000409783 ZNF185O15231 689 aa22.34■■□□□ 1.17
PTCD3-203ENST00000409783 PCCBP05166 539 aa22.34■■□□□ 1.17
PTCD3-203ENST00000409783 ETS1P14921 441 aa22.34■■□□□ 1.17
PTCD3-203ENST00000409783 HLA-DPA1P20036 260 aa22.34■■□□□ 1.17
PTCD3-203ENST00000409783 KCNJ1P48048 391 aa22.34■■□□□ 1.17
PTCD3-203ENST00000409783 DPTQ07507 201 aa22.34■■□□□ 1.17
PTCD3-203ENST00000409783 SLC14A1Q13336 389 aa22.34■■□□□ 1.17
PTCD3-203ENST00000409783 PRPSAP1Q14558 356 aa22.34■■□□□ 1.17
PTCD3-203ENST00000409783 CCDC70Q6NSX1 233 aa22.34■■□□□ 1.17
PTCD3-203ENST00000409783 PNCKQ6P2M8 343 aa22.34■■□□□ 1.17
PTCD3-203ENST00000409783 SLC25A41Q8N5S1 370 aa22.34■■□□□ 1.17
PTCD3-203ENST00000409783 APOOQ9BUR5 198 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms