RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 FOXR1Q6PIV2 292 aa14.76□□□□□ -0.05
CBX3-203ENST00000409747 PGBD5Q8N414 524 aa14.76□□□□□ -0.05
CBX3-203ENST00000409747 KIAA1524Q8TCG1 905 aa14.76□□□□□ -0.05
CBX3-203ENST00000409747 TMEM74Q96NL1 305 aa14.76□□□□□ -0.05
CBX3-203ENST00000409747 CYP4F12Q9HCS2 524 aa14.76□□□□□ -0.05
CBX3-203ENST00000409747 MOSPD1Q9UJG1 213 aa14.76□□□□□ -0.05
CBX3-203ENST00000409747 APPL1Q9UKG1 709 aa14.76□□□□□ -0.05
CBX3-203ENST00000409747 SHROOM3Q8TF72 1996 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 A0A087X0T9 212 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 PRSS38A1L453 326 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 TTC24A2A3L6 582 aaPredicted RBP14.75□□□□□ -0.05
CBX3-203ENST00000409747 CDRT15L2A8MXV6 281 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 PGLSO95336 258 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 FAM228BP0C875 321 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 MAXP61244 160 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 TRAF2Q12933 501 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 PEX6Q13608 980 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 C14orf28Q4W4Y0 310 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 CCDC122Q5T0U0 273 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 TXNRD3NBQ6F5E7 133 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 TIGD7Q6NT04 549 aaPredicted RBP14.75□□□□□ -0.05
CBX3-203ENST00000409747 CLEC14AQ86T13 490 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 CPLX3Q8WVH0 158 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 SLC39A7Q92504 469 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 DTD2Q96FN9 168 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 SCRN2Q96FV2 425 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 PRR11Q96HE9 360 aaPredicted RBP14.75□□□□□ -0.05
CBX3-203ENST00000409747 BTBD6Q96KE9 485 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 NSMCE3Q96MG7 304 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 TEX101Q9BY14 249 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 POLR1EQ9GZS1 481 aaKnown RBP14.75□□□□□ -0.05
CBX3-203ENST00000409747 LRRN3Q9H3W5 708 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 MRPL40Q9NQ50 206 aaKnown RBP14.75□□□□□ -0.05
CBX3-203ENST00000409747 RABGEF1Q9UJ41 708 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 KALRNO60229 2985 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 A0A1W2PNU3 283 aaPredicted RBP14.75□□□□□ -0.05
CBX3-203ENST00000409747 TNFSF15O95150 251 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 CES1P23141 567 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 TEAD1P28347 426 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 CCKBRP32239 447 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 INHBCP55103 352 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 CCL7P80098 99 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 SKOR1P84550 965 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 CERCAMQ5T4B2 595 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 DENND2CQ68D51 928 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 KCTD16Q68DU8 428 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 OGFOD3Q6PK18 319 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 NYAP1Q6ZVC0 841 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 HEATR4Q86WZ0 1026 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 CCNJLQ8IV13 435 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 TEX26Q8N6G2 289 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 ZNF564Q8TBZ8 553 aaPredicted RBP14.75□□□□□ -0.05
CBX3-203ENST00000409747 FAM71BQ8TC56 605 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 MCCC1Q96RQ3 725 aaPredicted RBP14.75□□□□□ -0.05
CBX3-203ENST00000409747 LGR4Q9BXB1 951 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 GSDMCQ9BYG8 508 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 TMEM168Q9H0V1 697 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 DPEP2Q9H4A9 486 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 CARS2Q9HA77 564 aaKnown RBP14.75□□□□□ -0.05
CBX3-203ENST00000409747 EPB41L5Q9HCM4 733 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 NT5MQ9NPB1 228 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 AMACRQ9UHK6 382 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 DNPEPQ9ULA0 475 aa14.75□□□□□ -0.05
CBX3-203ENST00000409747 B4DGG1 531 aa14.74□□□□□ -0.05
CBX3-203ENST00000409747 ERVH48-1M5A8F1 160 aa14.74□□□□□ -0.05
CBX3-203ENST00000409747 PLD2O14939 933 aa14.74□□□□□ -0.05
CBX3-203ENST00000409747 ZW10O43264 779 aa14.74□□□□□ -0.05
CBX3-203ENST00000409747 NUDT21O43809 227 aaKnown RBP14.74□□□□□ -0.05
CBX3-203ENST00000409747 GYPCP04921 128 aa14.74□□□□□ -0.05
CBX3-203ENST00000409747 PTMSP20962 102 aa14.74□□□□□ -0.05
CBX3-203ENST00000409747 CA4P22748 312 aa14.74□□□□□ -0.05
CBX3-203ENST00000409747 GARSP41250 739 aaKnown RBP14.74□□□□□ -0.05
CBX3-203ENST00000409747 RHDQ02161 417 aa14.74□□□□□ -0.05
CBX3-203ENST00000409747 C19orf57Q0VDD7 668 aa14.74□□□□□ -0.05
CBX3-203ENST00000409747 ILF3Q12906 894 aaKnown RBP eCLIP14.74□□□□□ -0.051e-7■■■■□ 21.9
CBX3-203ENST00000409747 SPECC1LQ69YQ0 1117 aa14.74□□□□□ -0.05
CBX3-203ENST00000409747 RAET1GQ6H3X3 334 aa14.74□□□□□ -0.05
CBX3-203ENST00000409747 RAB11FIP2Q7L804 512 aa14.74□□□□□ -0.05
CBX3-203ENST00000409747 MAP7D3Q8IWC1 876 aa14.74□□□□□ -0.05
CBX3-203ENST00000409747 FBXO39Q8N4B4 442 aa14.74□□□□□ -0.05
CBX3-203ENST00000409747 TMEM159Q96B96 161 aa14.74□□□□□ -0.05
CBX3-203ENST00000409747 ZNF670Q9BS34 389 aa14.74□□□□□ -0.05
CBX3-203ENST00000409747 TRNAU1APQ9NX07 287 aaKnown RBP14.74□□□□□ -0.05
CBX3-203ENST00000409747 UVRAGQ9P2Y5 699 aa14.74□□□□□ -0.05
CBX3-203ENST00000409747 PPIL1Q9Y3C6 166 aa14.74□□□□□ -0.05
CBX3-203ENST00000409747 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.74□□□□□ -0.051e-9■■■□□ 15.5
CBX3-203ENST00000409747 FASNP49327 2511 aaKnown RBP14.73□□□□□ -0.05
CBX3-203ENST00000409747 A0A1W2PQM1 296 aa14.73□□□□□ -0.05
CBX3-203ENST00000409747 GOLGA6CA6NDK9 693 aa14.73□□□□□ -0.05
CBX3-203ENST00000409747 GOLGA6BA6NDN3 693 aa14.73□□□□□ -0.05
CBX3-203ENST00000409747 NPIPB15A6NHN6 443 aaPredicted RBP14.73□□□□□ -0.05
CBX3-203ENST00000409747 MFSD11O43934 449 aa14.73□□□□□ -0.05
CBX3-203ENST00000409747 NOBOXO60393 691 aa14.73□□□□□ -0.05
CBX3-203ENST00000409747 PYGLP06737 847 aa14.73□□□□□ -0.05
CBX3-203ENST00000409747 KRT7P08729 469 aa14.73□□□□□ -0.05
CBX3-203ENST00000409747 GOLGA6DP0CG33 693 aa14.73□□□□□ -0.05
CBX3-203ENST00000409747 CCNB1P14635 433 aa14.73□□□□□ -0.05
CBX3-203ENST00000409747 LHCGRP22888 699 aa14.73□□□□□ -0.05
CBX3-203ENST00000409747 ETV3P41162 512 aa14.73□□□□□ -0.05
CBX3-203ENST00000409747 CDK3Q00526 305 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms