RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 PKP4Q99569 1192 aa4.12□□□□□ -1.75
PMS1-203ENST00000409593 PAIP1Q9H074 479 aaKnown RBP4.12□□□□□ -1.75
PMS1-203ENST00000409593 PPP1R3EQ9H7J1 279 aa4.12□□□□□ -1.75
PMS1-203ENST00000409593 AAR2Q9Y312 384 aaKnown RBP4.12□□□□□ -1.75
PMS1-203ENST00000409593 USP17L23D6RBM5 183 aa4.11□□□□□ -1.75
PMS1-203ENST00000409593 TULP2O00295 520 aa4.11□□□□□ -1.75
PMS1-203ENST00000409593 MID1O15344 667 aa4.11□□□□□ -1.75
PMS1-203ENST00000409593 TNFSF14O43557 240 aa4.11□□□□□ -1.75
PMS1-203ENST00000409593 F7P08709 466 aaPredicted RBP4.11□□□□□ -1.75
PMS1-203ENST00000409593 AMD1P17707 334 aa4.11□□□□□ -1.75
PMS1-203ENST00000409593 ARL1P40616 181 aaPredicted RBP4.11□□□□□ -1.75
PMS1-203ENST00000409593 HARS2P49590 506 aaKnown RBP4.11□□□□□ -1.75
PMS1-203ENST00000409593 PTP4A2Q12974 167 aa4.11□□□□□ -1.75
PMS1-203ENST00000409593 ZBTB17Q13105 803 aa4.11□□□□□ -1.75
PMS1-203ENST00000409593 PRICKLE4Q2TBC4 344 aa4.11□□□□□ -1.75
PMS1-203ENST00000409593 COL28A1Q2UY09 1125 aa4.11□□□□□ -1.75
PMS1-203ENST00000409593 C9orf50Q5SZB4 431 aa4.11□□□□□ -1.75
PMS1-203ENST00000409593 RGMBQ6NW40 437 aa4.11□□□□□ -1.75
PMS1-203ENST00000409593 TUBA1AQ71U36 451 aa4.11□□□□□ -1.75
PMS1-203ENST00000409593 FOXRED2Q8IWF2 684 aa4.11□□□□□ -1.75
PMS1-203ENST00000409593 NAGSQ8N159 534 aa4.11□□□□□ -1.75
PMS1-203ENST00000409593 FIG4Q92562 907 aa4.11□□□□□ -1.75
PMS1-203ENST00000409593 ZUFSPQ96AP4 578 aa4.11□□□□□ -1.75
PMS1-203ENST00000409593 SAAL1Q96ER3 474 aa4.11□□□□□ -1.75
PMS1-203ENST00000409593 RRP36Q96EU6 259 aaKnown RBP4.11□□□□□ -1.75
PMS1-203ENST00000409593 INPP4AQ96PE3 977 aaPredicted RBP4.11□□□□□ -1.75
PMS1-203ENST00000409593 TUBA1CQ9BQE3 449 aa4.11□□□□□ -1.75
PMS1-203ENST00000409593 EIF2AK1Q9BQI3 630 aaKnown RBP4.11□□□□□ -1.75
PMS1-203ENST00000409593 LRRC4Q9HBW1 653 aa4.11□□□□□ -1.75
PMS1-203ENST00000409593 SLC6A13Q9NSD5 602 aa4.11□□□□□ -1.75
PMS1-203ENST00000409593 C1RLQ9NZP8 487 aa4.11□□□□□ -1.75
PMS1-203ENST00000409593 PDP2Q9P2J9 529 aa4.11□□□□□ -1.75
PMS1-203ENST00000409593 GJD2Q9UKL4 321 aa4.11□□□□□ -1.75
PMS1-203ENST00000409593 GTF2A1LQ9UNN4 478 aa4.11□□□□□ -1.75
PMS1-203ENST00000409593 A6NLC8 198 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 IGKV3-20P01619 116 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 DGKAP23743 735 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 METAP2P50579 478 aaKnown RBP eCLIP4.1□□□□□ -1.75
PMS1-203ENST00000409593 BRWD1-AS2P59051 145 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 SEC61BP60468 96 aaKnown RBP4.1□□□□□ -1.75
PMS1-203ENST00000409593 ACSM2AQ08AH3 577 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 KCTD18Q6PI47 426 aaPredicted RBP4.1□□□□□ -1.75
PMS1-203ENST00000409593 ARMC8Q8IUR7 673 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 ODF3L1Q8IXM7 274 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 CNTROBQ8N137 903 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 KCNH5Q8NCM2 988 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 SPATA22Q8NHS9 363 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 CD101Q93033 1021 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 EPYCQ99645 322 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 EVA1AQ9H8M9 152 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 HINT3Q9NQE9 182 aaKnown RBP4.1□□□□□ -1.75
PMS1-203ENST00000409593 PCDHB16Q9NRJ7 776 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 TTC7AQ9ULT0 858 aaPredicted RBP4.1□□□□□ -1.75
PMS1-203ENST00000409593 GRID2O43424 1007 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 KRT36O76013 467 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 AGR2O95994 175 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 MAOAP21397 527 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 DDIT3P35638 169 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 CPOXP36551 454 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 TMPOP42166 694 aaKnown RBP4.1□□□□□ -1.75
PMS1-203ENST00000409593 CLCNKAP51800 687 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 EIF3BP55884 814 aaKnown RBP4.1□□□□□ -1.75
PMS1-203ENST00000409593 HYAL1Q12794 435 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 FGFBP1Q14512 234 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 ZRSR1Q15695 479 aaKnown RBP4.1□□□□□ -1.75
PMS1-203ENST00000409593 GSTA3Q16772 222 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 ALG11Q2TAA5 492 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 METTL2BQ6P1Q9 378 aaKnown RBP4.1□□□□□ -1.75
PMS1-203ENST00000409593 HAPLN4Q86UW8 402 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 CCDC13Q8IYE1 715 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 SPATA6LQ8N4H0 392 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 WFIKKN2Q8TEU8 576 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 METTL2AQ96IZ6 378 aaKnown RBP4.1□□□□□ -1.75
PMS1-203ENST00000409593 FEM1CQ96JP0 617 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 FAM110AQ9BQ89 295 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 AGXT2Q9BYV1 514 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 IFIH1Q9BYX4 1025 aaKnown RBP4.1□□□□□ -1.75
PMS1-203ENST00000409593 MYH16Q9H6N6 1097 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 EBF2Q9HAK2 575 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 MKLN1Q9UL63 735 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 NAALADL1Q9UQQ1 740 aa4.1□□□□□ -1.75
PMS1-203ENST00000409593 A0A087WYN8 130 aa4.09□□□□□ -1.76
PMS1-203ENST00000409593 AKR1B15C9JRZ8 316 aaPredicted RBP4.09□□□□□ -1.76
PMS1-203ENST00000409593 TAF4O00268 1085 aa4.09□□□□□ -1.76
PMS1-203ENST00000409593 HOXB5P09067 269 aa4.09□□□□□ -1.76
PMS1-203ENST00000409593 DDX5P17844 614 aaKnown RBP4.09□□□□□ -1.76
PMS1-203ENST00000409593 CDAP32320 146 aa4.09□□□□□ -1.76
PMS1-203ENST00000409593 RAD23BP54727 409 aa4.09□□□□□ -1.76
PMS1-203ENST00000409593 DRAP1Q14919 205 aaPredicted RBP4.09□□□□□ -1.76
PMS1-203ENST00000409593 ZNF628Q5EBL2 1059 aa4.09□□□□□ -1.76
PMS1-203ENST00000409593 IRAK1BP1Q5VVH5 260 aa4.09□□□□□ -1.76
PMS1-203ENST00000409593 GGNBP1Q5YKI7 109 aa4.09□□□□□ -1.76
PMS1-203ENST00000409593 ACAD10Q6JQN1 1059 aa4.09□□□□□ -1.76
PMS1-203ENST00000409593 C9orf139Q6ZV77 190 aa4.09□□□□□ -1.76
PMS1-203ENST00000409593 MAB21L3Q8N8X9 362 aa4.09□□□□□ -1.76
PMS1-203ENST00000409593 OR2AK2Q8NG84 335 aa4.09□□□□□ -1.76
PMS1-203ENST00000409593 GTF3C6Q969F1 213 aa4.09□□□□□ -1.76
PMS1-203ENST00000409593 SLC41A2Q96JW4 573 aa4.09□□□□□ -1.76
PMS1-203ENST00000409593 NODALQ96S42 347 aa4.09□□□□□ -1.76
PMS1-203ENST00000409593 KCNN2Q9H2S1 579 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms