RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 PRR5-ARHGAP8B1AHC4 643 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 NEMP1O14524 444 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 TP73O15350 636 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 AP1G1O43747 822 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 ITPKAP23677 461 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 TNFRSF8P28908 595 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 ACSL1P33121 698 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 GRIA1P42261 906 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 FAM193AP78312 1265 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 ARHGAP8P85298 464 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 PDE1BQ01064 536 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 TRADDQ15628 312 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 ERCC6LQ2NKX8 1250 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 PIP5KL1Q5T9C9 394 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 AGBL4Q5VU57 503 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 ZNF534Q76KX8 674 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 CAND1Q86VP6 1230 aaKnown RBP16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 ZCCHC9Q8N567 271 aaKnown RBP16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.55■□□□□ 0.247e-6■■□□□ 11.7
TSPAN4-208ENST00000409531 HSPA12BQ96MM6 686 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 PHACTR1Q9C0D0 580 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 BTBD1Q9H0C5 482 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 PCED1AQ9H1Q7 454 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 KDM4CQ9H3R0 1056 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 ANKZF1Q9H8Y5 726 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 SGK2Q9HBY8 427 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 TMEM74BQ9NUR3 256 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 PILRBQ9UKJ0 227 aa16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 V9GYY5 206 aaPredicted RBP16.55■□□□□ 0.24
TSPAN4-208ENST00000409531 METTL12A8MUP2 240 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 AREL1O15033 823 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 KHNYNO15037 678 aaKnown RBP16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 TSPAN6O43657 245 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 CRTAMO95727 393 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 ALPIP09923 528 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 ZNF30P17039 623 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 CTPS1P17812 591 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 VIPR1P32241 457 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 HOXD12P35452 270 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 HNF1BP35680 557 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 MMP12P39900 470 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 MAGEA3P43357 314 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 CARSP49589 748 aaKnown RBP16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 SESN2P58004 480 aaPredicted RBP16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 ARHGEF7Q14155 803 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 SF3A2Q15428 464 aaKnown RBP16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 ZDHHC24Q6UX98 284 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 CENPUQ71F23 418 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 DPPA4Q7L190 304 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 GLT6D1Q7Z4J2 308 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 BRSK1Q8TDC3 778 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 BLOC1S5Q8TDH9 187 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 LRRC39Q96DD0 335 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 FMO2Q99518 471 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 NEUROG2Q9H2A3 272 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 SMOC1Q9H4F8 434 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 ZDHHC18Q9NUE0 388 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 PIH1D1Q9NWS0 290 aaKnown RBP16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 SAMD15Q9P1V8 674 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 NUMA1Q14980 2115 aa16.54■□□□□ 0.24
TSPAN4-208ENST00000409531 LRRK1Q38SD2 2015 aa16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 C1orf232A0A0U1RR37 186 aa16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 HEATR9A2RTY3 570 aa16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 NPIPB15A6NHN6 443 aaPredicted RBP16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 SDR42E2A6NKP2 422 aa16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 C2orf81A6NN90 581 aa16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 PLK4O00444 970 aa16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 EIF3HO15372 352 aaKnown RBP eCLIP16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 PLRG1O43660 514 aaKnown RBP16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 TPH1P17752 444 aa16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 SDHBP21912 280 aa16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 ABL2P42684 1182 aa16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 WDR45BQ5MNZ6 344 aa16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 PEAR1Q5VY43 1037 aaPredicted RBP16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 WDR93Q6P2C0 686 aa16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 RGL4Q8IZJ4 473 aa16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 PPHLN1Q8NEY8 458 aaKnown RBP16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 OR14C36Q8NHC7 312 aa16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 CEP76Q8TAP6 659 aa16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 PTCD2Q8WV60 388 aaKnown RBP16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 DNASE2BQ8WZ79 361 aa16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 RANBP9Q96S59 729 aa16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 GPR63Q9BZJ6 419 aa16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 PREBQ9HCU5 417 aa16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 B4GALT6Q9UBX8 382 aa16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 SERGEFQ9UGK8 458 aa16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 ZNF711Q9Y462 761 aa16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 FADS3Q9Y5Q0 445 aa16.53■□□□□ 0.24
TSPAN4-208ENST00000409531 MAGEB16A2A368 324 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 LRRC72A6NJI9 287 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 PSMD11O00231 422 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 AVILO75366 819 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 SEMA4FO95754 770 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 ELFN1P0C7U0 828 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 PIRTP0C851 137 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 ADRA1DP25100 572 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 MGAT1P26572 445 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 ADPRHP54922 357 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 456.9 ms