RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 ME2P23368 584 aa16.81■□□□□ 0.28
PCDHA13-202ENST00000409494 TM4SF4P48230 202 aa16.81■□□□□ 0.28
PCDHA13-202ENST00000409494 ZNHIT3Q15649 155 aaPredicted RBP16.81■□□□□ 0.28
PCDHA13-202ENST00000409494 ANKLE1Q8NAG6 615 aa16.81■□□□□ 0.28
PCDHA13-202ENST00000409494 USP7Q93009 1102 aa16.81■□□□□ 0.28
PCDHA13-202ENST00000409494 SLCO1B3Q9NPD5 702 aa16.81■□□□□ 0.28
PCDHA13-202ENST00000409494 PLCH1Q4KWH8 1693 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 DNAJC25-GNG10A0A024R161 153 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 PSMG1O95456 288 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 FSHRP23945 695 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 CCT8P50990 548 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 ZCCHC23Q6ZST2 131 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 POU5F2Q8N7G0 328 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 OR4K2Q8NGD2 314 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 NDOR1Q9UHB4 597 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 COLEC10Q9Y6Z7 277 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 FAM220BPB1ANY3 271 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 ADAMTS3O15072 1205 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 TPST1O60507 370 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 CLPTM1O96005 669 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 ZNF865P0CJ78 1059 aaPredicted RBP16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 CBX2Q14781 532 aaPredicted RBP16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 MARK2Q7KZI7 788 aaKnown RBP16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 CACUL1Q86Y37 369 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 DLG3Q92796 817 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 CATSPER2Q96P56 530 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 SNX13Q9Y5W8 968 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 FASP25445 335 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 LACTB2Q53H82 288 aaPredicted RBP16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 CCDC185Q8N715 623 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 SLC35F5Q8WV83 523 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 PCYT2Q99447 389 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 ZNF184Q99676 751 aaPredicted RBP16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 ENPP3O14638 875 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 ESR1P03372 595 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 ATP6V1C1P21283 382 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 SOX11P35716 441 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 SLC11A1P49279 550 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 TEAD4Q15561 434 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 CYP1B1Q16678 543 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 MORN1Q5T089 497 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 AP2M1Q96CW1 435 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 LINGO1Q96FE5 620 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 BPIFA1Q9NP55 256 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 LEF1Q9UJU2 399 aaPredicted RBP16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 MFHAS1Q9Y4C4 1052 aa16.8■□□□□ 0.28
PCDHA13-202ENST00000409494 HS6ST1O60243 411 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 CRADDP78560 199 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 GPR33Q49SQ1 333 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 ARMC3Q5W041 872 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 RFWD3Q6PCD5 774 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 CYP4Z2PQ8N1L4 340 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 SSU72Q9NP77 194 aaKnown RBP16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 ANXA6P08133 673 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 PAX7P23759 505 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 MTHFRP42898 656 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 PTGER3P43115 390 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 SH3RF2Q8TEC5 729 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 RNF39Q9H2S5 420 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 SEMA4BQ9NPR2 832 aaPredicted RBP16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 PLK2Q9NYY3 685 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 SCAMP3O14828 347 aaKnown RBP16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 BUD23O43709 281 aaKnown RBP16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 EDF1O60869 148 aaKnown RBP16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 HNRNPA1P09651 372 aaKnown RBP eCLIP16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 COX7A2P14406 83 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 BLKP51451 505 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 RUNX1T1Q06455 604 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 LAPTM5Q13571 262 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 SLC39A4Q6P5W5 647 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 FAM151BQ6UXP7 276 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 DHFR2Q86XF0 187 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 SLC44A2Q8IWA5 706 aaPredicted RBP16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 FANCEQ9HB96 536 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 CACNA2D2Q9NY47 1150 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 KRT75O95678 551 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 RB1P06400 928 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 CYBAP13498 195 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 AP5B1Q2VPB7 878 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 CHSY3Q70JA7 882 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 C17orf64Q86WR6 236 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 ZNF567Q8N184 647 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 C10orf53Q8N6V4 93 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 AVL9Q8NBF6 648 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 CPT1BQ92523 772 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 ZNF232Q9UNY5 417 aa16.79■□□□□ 0.28
PCDHA13-202ENST00000409494 H3BM21 787 aa16.78■□□□□ 0.28
PCDHA13-202ENST00000409494 GABRDO14764 452 aa16.78■□□□□ 0.28
PCDHA13-202ENST00000409494 ZNF23P17027 643 aa16.78■□□□□ 0.28
PCDHA13-202ENST00000409494 MLLT6P55198 1093 aaPredicted RBP16.78■□□□□ 0.28
PCDHA13-202ENST00000409494 TAF1AQ15573 450 aaPredicted RBP16.78■□□□□ 0.28
PCDHA13-202ENST00000409494 LSM12Q3MHD2 195 aaKnown RBP16.78■□□□□ 0.28
PCDHA13-202ENST00000409494 TSTD2Q5T7W7 516 aa16.78■□□□□ 0.28
PCDHA13-202ENST00000409494 PCDH20Q8N6Y1 951 aaKnown RBP16.78■□□□□ 0.28
PCDHA13-202ENST00000409494 ZNF614Q8N883 585 aa16.78■□□□□ 0.28
PCDHA13-202ENST00000409494 INTS10Q9NVR2 710 aaKnown RBP16.78■□□□□ 0.28
PCDHA13-202ENST00000409494 RPL26L1Q9UNX3 145 aaKnown RBP16.78■□□□□ 0.28
PCDHA13-202ENST00000409494 CCDC189A1A4V9 331 aa16.78■□□□□ 0.28
PCDHA13-202ENST00000409494 AZIN1O14977 448 aa16.78■□□□□ 0.28
PCDHA13-202ENST00000409494 TGDSO95455 350 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms