RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 A6NHS1 94 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 CXCL11O14625 94 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 CYP26A1O43174 497 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 FARS2O95363 451 aaKnown RBP3.4□□□□□ -1.87
NEB-204ENST00000409198 PSMB9P28065 219 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 CDC42P60953 191 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 SEC23AQ15436 765 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 C5orf22Q49AR2 442 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 C3orf62Q6ZUJ4 267 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 ZNF615Q8N8J6 731 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 SGF29Q96ES7 293 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 PGLYRP2Q96PD5 576 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 MXRA8Q9BRK3 442 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 IKZF3Q9UKT9 509 aa3.4□□□□□ -1.87
NEB-204ENST00000409198 TNS3Q68CZ2 1445 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 CDK12Q9NYV4 1490 aaPredicted RBP3.39□□□□□ -1.87
NEB-204ENST00000409198 A0A1W2PP64 1363 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 MAGEA13PA6NCF6 341 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 NR4A1P22736 598 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 DUSP4Q13115 394 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 PTCH1Q13635 1447 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 ITSN1Q15811 1721 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 HYIQ5T013 277 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 TMEM86AQ8N2M4 240 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 PLA2G15Q8NCC3 412 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 CNOT9Q92600 299 aaKnown RBP3.39□□□□□ -1.87
NEB-204ENST00000409198 GTPBP3Q969Y2 492 aaKnown RBP3.39□□□□□ -1.87
NEB-204ENST00000409198 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.39□□□□□ -1.87
NEB-204ENST00000409198 PNO1Q9NRX1 252 aaKnown RBP3.39□□□□□ -1.87
NEB-204ENST00000409198 TOR4AQ9NXH8 423 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 IFT80Q9P2H3 777 aaPredicted RBP3.39□□□□□ -1.87
NEB-204ENST00000409198 MINPP1Q9UNW1 487 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 NEU2Q9Y3R4 380 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 A0A1B0GVC2 190 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 PCCBP05166 539 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 HOXB8P17481 243 aaPredicted RBP3.39□□□□□ -1.87
NEB-204ENST00000409198 PPIBP23284 216 aaKnown RBP3.39□□□□□ -1.87
NEB-204ENST00000409198 ADORA1P30542 326 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 EIF5AP63241 154 aaKnown RBP3.39□□□□□ -1.87
NEB-204ENST00000409198 BNIP1Q12981 228 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 ITPK1Q13572 414 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 ARFRP1Q13795 201 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 SMIM15Q7Z3B0 74 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 GPC2Q8N158 579 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 SELENOMQ8WWX9 145 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 DNASE1L2Q92874 299 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 DGAT2Q96PD7 388 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 GFM1Q96RP9 751 aaKnown RBP3.39□□□□□ -1.87
NEB-204ENST00000409198 IMP3Q9NV31 184 aaKnown RBP3.39□□□□□ -1.87
NEB-204ENST00000409198 TIMM8BQ9Y5J9 83 aaPredicted RBP3.39□□□□□ -1.87
NEB-204ENST00000409198 SLC16A3O15427 465 aaKnown RBP3.39□□□□□ -1.87
NEB-204ENST00000409198 ZNF16P17020 682 aaPredicted RBP3.39□□□□□ -1.87
NEB-204ENST00000409198 CCNOP22674 350 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 GRIK2Q13002 908 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 MPPED2Q15777 294 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 PLEKHA7Q6IQ23 1121 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 SATL1Q86VE3 508 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 ARHGAP12Q8IWW6 846 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 TMEM192Q8IY95 271 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 SLC22A8Q8TCC7 542 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 CCDC115Q96NT0 180 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 REV1Q9UBZ9 1251 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 MED31Q9Y3C7 131 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 PREX1Q8TCU6 1659 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 SLC25A14O95258 325 aaPredicted RBP3.39□□□□□ -1.87
NEB-204ENST00000409198 FDPSP14324 419 aaKnown RBP3.39□□□□□ -1.87
NEB-204ENST00000409198 PTX3P26022 381 aaPredicted RBP3.39□□□□□ -1.87
NEB-204ENST00000409198 NDUFS1P28331 727 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 ACTR1BP42025 376 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 TPTEP56180 551 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 USP17L6PQ6QN14 398 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 PTF1AQ7RTS3 328 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 CDH24Q86UP0 819 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 HORMAD2Q8N7B1 307 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 MOCOSQ96EN8 888 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.39□□□□□ -1.87
NEB-204ENST00000409198 MCUBQ9NWR8 336 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 ASXL1Q8IXJ9 1541 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 HMGCRP04035 888 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 GYS1P13807 737 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 HK2P52789 917 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 SSTP61278 116 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 GRM4Q14833 912 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 MAP1SQ66K74 1059 aaPredicted RBP3.39□□□□□ -1.87
NEB-204ENST00000409198 GALNT4Q8N4A0 578 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 COX4I2Q96KJ9 171 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 NOD2Q9HC29 1040 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 ERVK-5Q9HDB9 667 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 A0A1W2PQ27 194 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 A0A1W2PQ64 194 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 A0A1W2PQD8 194 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 FTCDNL1E5RQL4 147 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 FMO4P31512 558 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 SLC39A14Q15043 492 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 C6orf132Q5T0Z8 1188 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 YTHDF3Q7Z739 585 aaKnown RBP3.39□□□□□ -1.87
NEB-204ENST00000409198 UBASH3BQ8TF42 649 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 DNAJB3Q8WWF6 145 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 TMEM176AQ96HP8 235 aa3.39□□□□□ -1.87
NEB-204ENST00000409198 TMEM117Q9H0C3 514 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms