RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 ZNF805Q5CZA5 627 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 EOGTQ5NDL2 527 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 CFAP58Q5T655 872 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 NAPEPLDQ6IQ20 393 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 ANO7Q6IWH7 933 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 KIAA1324Q6UXG2 1013 aaKnown RBP8.38□□□□□ -1.07
GPC3-203ENST00000406757 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.38□□□□□ -1.07
GPC3-203ENST00000406757 PARS2Q7L3T8 475 aaKnown RBP8.38□□□□□ -1.07
GPC3-203ENST00000406757 TRMT11Q7Z4G4 463 aaKnown RBP8.38□□□□□ -1.07
GPC3-203ENST00000406757 TTC7BQ86TV6 843 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 FAM124AQ86V42 546 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 HOOK3Q86VS8 718 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 TMPRSS6Q8IU80 811 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 PGBD3Q8N328 593 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 ZCCHC9Q8N567 271 aaKnown RBP8.38□□□□□ -1.07
GPC3-203ENST00000406757 MCUQ8NE86 351 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 TSTD1Q8NFU3 115 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 OR2T3Q8NH03 318 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 UHMK1Q8TAS1 419 aaKnown RBP8.38□□□□□ -1.07
GPC3-203ENST00000406757 BLOC1S5Q8TDH9 187 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 GANCQ8TET4 914 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 HMGB4Q8WW32 186 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 FEM1CQ96JP0 617 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 C9orf72Q96LT7 481 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 TUBGCP5Q96RT8 1024 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 WDR83Q9BRX9 315 aaKnown RBP8.38□□□□□ -1.07
GPC3-203ENST00000406757 MKRN2Q9H000 416 aaKnown RBP8.38□□□□□ -1.07
GPC3-203ENST00000406757 RSPH9Q9H1X1 276 aaPredicted RBP8.38□□□□□ -1.07
GPC3-203ENST00000406757 EIF2B3Q9NR50 452 aaKnown RBP8.38□□□□□ -1.07
GPC3-203ENST00000406757 GOLGA6AQ9NYA3 693 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 SERGEFQ9UGK8 458 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 GGT7Q9UJ14 662 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 MMP17Q9ULZ9 603 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 SHOC2Q9UQ13 582 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 CHMP2BQ9UQN3 213 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 ITM2BQ9Y287 266 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 MAD1L1Q9Y6D9 718 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 EML5Q05BV3 1969 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 CHD8Q9HCK8 2581 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 A0A1W2PP55 124 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 ERI2A8K979 691 aaKnown RBP8.37□□□□□ -1.07
GPC3-203ENST00000406757 PATE3B3GLJ2 98 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 ANKRD66B4E2M5 251 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 NPC1O15118 1278 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 CLDN7O95471 211 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 PRNPP04156 253 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 GABRG2P18507 467 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 NDUFV2P19404 249 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 SPINK2P20155 84 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 BCKDHBP21953 392 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 XPAP23025 273 aaPredicted RBP8.37□□□□□ -1.07
GPC3-203ENST00000406757 ELK3P41970 407 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 TNNT3P45378 269 aaPredicted RBP8.37□□□□□ -1.07
GPC3-203ENST00000406757 MAPK8P45983 427 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 ARL4CP56559 192 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 SARNPP82979 210 aaKnown RBP8.37□□□□□ -1.07
GPC3-203ENST00000406757 CAV1Q03135 178 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 CNTN1Q12860 1018 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 CDH17Q12864 832 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 FOXC1Q12948 553 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 MSLNQ13421 630 aaPredicted RBP8.37□□□□□ -1.07
GPC3-203ENST00000406757 ELAVL3Q14576 367 aaKnown RBP8.37□□□□□ -1.07
GPC3-203ENST00000406757 CST6Q15828 149 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 CRY1Q16526 586 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 HIF1AQ16665 826 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 USP39Q53GS9 565 aaKnown RBP8.37□□□□□ -1.07
GPC3-203ENST00000406757 RALGPS1Q5JS13 557 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 PMS2CLQ68D20 193 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 ZNF776Q68DI1 518 aaPredicted RBP8.37□□□□□ -1.07
GPC3-203ENST00000406757 WDR93Q6P2C0 686 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 CASC4Q6P4E1 433 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 RFLNAQ6ZTI6 216 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 LINC00523Q86TU6 105 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 TSPAN33Q86UF1 283 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 ZBED8Q8IZ13 594 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 HDDC3Q8N4P3 179 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 AADATQ8N5Z0 425 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 TMIEQ8NEW7 156 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 MDGA1Q8NFP4 955 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 ECHDC3Q96DC8 303 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 CFAP36Q96G28 342 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 SIGLEC10Q96LC7 697 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 ZNF778Q96MU6 729 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 ZNF641Q96N77 438 aaPredicted RBP8.37□□□□□ -1.07
GPC3-203ENST00000406757 FMO2Q99518 471 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 ADGRE3Q9BY15 652 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 CD248Q9HCU0 757 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 BPIFA1Q9NP55 256 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 PCDH12Q9NPG4 1184 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 CHRAC1Q9NRG0 131 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 MTRF1LQ9UGC7 380 aaKnown RBP8.37□□□□□ -1.07
GPC3-203ENST00000406757 SLC2A6Q9UGQ3 507 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 RAB21Q9UL25 225 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 PHTF1Q9UMS5 762 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 FNDC3AQ9Y2H6 1198 aaKnown RBP8.37□□□□□ -1.07
GPC3-203ENST00000406757 ARL5AQ9Y689 179 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 SDK1Q7Z5N4 2213 aa8.37□□□□□ -1.07
GPC3-203ENST00000406757 USP24Q9UPU5 2620 aa8.36□□□□□ -1.07
GPC3-203ENST00000406757 A0A0J9YYE9 177 aa8.36□□□□□ -1.07
GPC3-203ENST00000406757 NPIPB15A6NHN6 443 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms