RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 CD70P32970 193 aa29.01■■■□□ 2.23
CSNK1E-205ENST00000405675 CCR10P46092 362 aa29.01■■■□□ 2.23
CSNK1E-205ENST00000405675 TSNAXIP1Q2TAA8 658 aa29.01■■■□□ 2.23
CSNK1E-205ENST00000405675 MPPE1Q53F39 396 aa29.01■■■□□ 2.23
CSNK1E-205ENST00000405675 TMEM207Q6UWW9 146 aa29.01■■■□□ 2.23
CSNK1E-205ENST00000405675 C12orf76Q8N812 135 aaPredicted RBP29.01■■■□□ 2.23
CSNK1E-205ENST00000405675 ANKRD49Q8WVL7 239 aa29.01■■■□□ 2.23
CSNK1E-205ENST00000405675 LRMDAQ9H2I8 198 aa29.01■■■□□ 2.23
CSNK1E-205ENST00000405675 ZNF195O14628 629 aa29■■■□□ 2.23
CSNK1E-205ENST00000405675 WISP3O95389 354 aaPredicted RBP29■■■□□ 2.23
CSNK1E-205ENST00000405675 LIPMQ5VYY2 423 aa29■■■□□ 2.23
CSNK1E-205ENST00000405675 MRNIPQ6NTE8 343 aa29■■■□□ 2.23
CSNK1E-205ENST00000405675 PIM3Q86V86 326 aa29■■■□□ 2.23
CSNK1E-205ENST00000405675 EFHBQ8N7U6 833 aa29■■■□□ 2.23
CSNK1E-205ENST00000405675 ZNF781Q8N8C0 355 aa29■■■□□ 2.23
CSNK1E-205ENST00000405675 SGF29Q96ES7 293 aa29■■■□□ 2.23
CSNK1E-205ENST00000405675 TM6SF2Q9BZW4 377 aa29■■■□□ 2.23
CSNK1E-205ENST00000405675 DPP7Q9UHL4 492 aa29■■■□□ 2.23
CSNK1E-205ENST00000405675 ARHGAP26Q9UNA1 814 aa29■■■□□ 2.23
CSNK1E-205ENST00000405675 HSPA4LO95757 839 aa29■■■□□ 2.23
CSNK1E-205ENST00000405675 BMP1P13497 986 aa29■■■□□ 2.23
CSNK1E-205ENST00000405675 TUBB3Q13509 450 aa29■■■□□ 2.23
CSNK1E-205ENST00000405675 DUSP6Q16828 381 aa29■■■□□ 2.23
CSNK1E-205ENST00000405675 CMTM8Q8IZV2 173 aa29■■■□□ 2.23
CSNK1E-205ENST00000405675 OR6K2Q8NGY2 324 aa29■■■□□ 2.23
CSNK1E-205ENST00000405675 TTC8Q8TAM2 541 aa29■■■□□ 2.23
CSNK1E-205ENST00000405675 PTCD3Q96EY7 689 aaKnown RBP29■■■□□ 2.23
CSNK1E-205ENST00000405675 TSPAN17Q96FV3 270 aa29■■■□□ 2.23
CSNK1E-205ENST00000405675 C2orf49Q9BVC5 232 aaPredicted RBP29■■■□□ 2.23
CSNK1E-205ENST00000405675 ADGRE3Q9BY15 652 aa29■■■□□ 2.23
CSNK1E-205ENST00000405675 GPAMQ9HCL2 828 aa29■■■□□ 2.23
CSNK1E-205ENST00000405675 ANKRD36A6QL64 1941 aa28.99■■■□□ 2.23
CSNK1E-205ENST00000405675 PFKLP17858 780 aa28.99■■■□□ 2.23
CSNK1E-205ENST00000405675 GRIA4P48058 902 aa28.99■■■□□ 2.23
CSNK1E-205ENST00000405675 TIAL1Q01085 375 aaKnown RBP eCLIP28.99■■■□□ 2.23
CSNK1E-205ENST00000405675 PRSS36Q5K4E3 855 aa28.99■■■□□ 2.23
CSNK1E-205ENST00000405675 MPP7Q5T2T1 576 aa28.99■■■□□ 2.23
CSNK1E-205ENST00000405675 DDX51Q8N8A6 666 aaKnown RBP eCLIP28.99■■■□□ 2.23
CSNK1E-205ENST00000405675 SREK1Q8WXA9 508 aaKnown RBP28.99■■■□□ 2.23
CSNK1E-205ENST00000405675 MRPL57Q9BQC6 102 aaKnown RBP28.99■■■□□ 2.23
CSNK1E-205ENST00000405675 MRPL46Q9H2W6 279 aaKnown RBP28.99■■■□□ 2.23
CSNK1E-205ENST00000405675 KLC4Q9NSK0 619 aa28.99■■■□□ 2.23
CSNK1E-205ENST00000405675 INTS6Q9UL03 887 aaKnown RBP28.99■■■□□ 2.23
CSNK1E-205ENST00000405675 ATG2AQ2TAZ0 1938 aa28.99■■■□□ 2.23
CSNK1E-205ENST00000405675 H2AFYO75367 372 aaKnown RBP28.99■■■□□ 2.23
CSNK1E-205ENST00000405675 CHRNGP07510 517 aa28.99■■■□□ 2.23
CSNK1E-205ENST00000405675 CCDC166P0CW27 439 aa28.99■■■□□ 2.23
CSNK1E-205ENST00000405675 PSMA3P25788 255 aa28.99■■■□□ 2.23
CSNK1E-205ENST00000405675 USP4Q13107 963 aa28.99■■■□□ 2.23
CSNK1E-205ENST00000405675 RILPQ96NA2 401 aa28.99■■■□□ 2.23
CSNK1E-205ENST00000405675 SIKE1Q9BRV8 207 aa28.99■■■□□ 2.23
CSNK1E-205ENST00000405675 LMAN2LQ9H0V9 348 aa28.99■■■□□ 2.23
CSNK1E-205ENST00000405675 POLR3BQ9NW08 1133 aaPredicted RBP28.99■■■□□ 2.23
CSNK1E-205ENST00000405675 NOTCH4Q99466 2003 aa28.98■■■□□ 2.23
CSNK1E-205ENST00000405675 C2orf81A6NN90 581 aa28.98■■■□□ 2.23
CSNK1E-205ENST00000405675 OGNP20774 298 aaKnown RBP28.98■■■□□ 2.23
CSNK1E-205ENST00000405675 ARHGAP15Q53QZ3 475 aa28.98■■■□□ 2.23
CSNK1E-205ENST00000405675 VWA5B1Q5TIE3 1220 aa28.98■■■□□ 2.23
CSNK1E-205ENST00000405675 VN1R2Q8NFZ6 395 aa28.98■■■□□ 2.23
CSNK1E-205ENST00000405675 FIBINQ8TAL6 211 aa28.98■■■□□ 2.23
CSNK1E-205ENST00000405675 UTP4Q969X6 686 aaKnown RBP28.98■■■□□ 2.23
CSNK1E-205ENST00000405675 UBXN10Q96LJ8 280 aa28.98■■■□□ 2.23
CSNK1E-205ENST00000405675 PCDHB9Q9Y5E1 797 aa28.98■■■□□ 2.23
CSNK1E-205ENST00000405675 FZD6O60353 706 aa28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 ALOX15P16050 662 aaPredicted RBP28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 STC1P52823 247 aa28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 NAGLUP54802 743 aa28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 TYSND1Q2T9J0 566 aa28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 TECRLQ5HYJ1 363 aa28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 FAM91A1Q658Y4 838 aa28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 RETSATQ6NUM9 610 aa28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 TTC30BQ8N4P2 665 aa28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 LEMD2Q8NC56 503 aa28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 LTA4HP09960 611 aaKnown RBP28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 LPOP22079 712 aaPredicted RBP28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 FDXRP22570 491 aa28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 DDX6P26196 483 aaKnown RBP eCLIP28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 IDH3AP50213 366 aa28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 KRT72Q14CN4 511 aa28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 FAM83EQ2M2I3 478 aa28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 FAM45BPQ6NSW5 357 aa28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 TREML1Q86YW5 311 aa28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 TXNDC5Q8NBS9 432 aaKnown RBP28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 FAM45AQ8TCE6 357 aa28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 LMLNQ96KR4 655 aa28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 DRC3Q9H069 523 aa28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 BPIFA1Q9NP55 256 aa28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 KIAA1522Q9P206 1035 aaPredicted RBP28.97■■■□□ 2.23
CSNK1E-205ENST00000405675 PRAMEF12O95522 483 aa28.96■■■□□ 2.23
CSNK1E-205ENST00000405675 HNRNPH1P31943 449 aaKnown RBP28.96■■■□□ 2.23
CSNK1E-205ENST00000405675 CDKN1CP49918 316 aaPredicted RBP28.96■■■□□ 2.23
CSNK1E-205ENST00000405675 PLEKHG6Q3KR16 790 aa28.96■■■□□ 2.23
CSNK1E-205ENST00000405675 AFTPHQ6ULP2 937 aa28.96■■■□□ 2.23
CSNK1E-205ENST00000405675 TMC5Q6UXY8 1006 aa28.96■■■□□ 2.23
CSNK1E-205ENST00000405675 SDCCAG8Q86SQ7 713 aaPredicted RBP28.96■■■□□ 2.23
CSNK1E-205ENST00000405675 CAMK1DQ8IU85 385 aa28.96■■■□□ 2.23
CSNK1E-205ENST00000405675 ING5Q8WYH8 240 aa28.96■■■□□ 2.23
CSNK1E-205ENST00000405675 INPP5DQ92835 1189 aa28.96■■■□□ 2.23
CSNK1E-205ENST00000405675 NSL1Q96IY1 281 aa28.96■■■□□ 2.23
CSNK1E-205ENST00000405675 ZSWIM3Q96MP5 696 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms