RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 MRM3Q9HC36 420 aaKnown RBP16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 MARCH2Q9P0N8 246 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 VPS28Q9UK41 221 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 RUVBL2Q9Y230 463 aaKnown RBP16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ACOT9Q9Y305 439 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 GOLGA8TH3BQL2 631 aa15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 PHGDHO43175 533 aaKnown RBP15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 GRID2O43424 1007 aa15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SORBS2O94875 1100 aaKnown RBP15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SBK3P0C264 359 aa15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SERPINB5P36952 375 aa15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 PPARGP37231 505 aaPredicted RBP15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 PEX6Q13608 980 aa15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 LSM12Q3MHD2 195 aaKnown RBP15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 NAIF1Q69YI7 327 aaPredicted RBP15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 LRRC8EQ6NSJ5 796 aa15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SNX32Q86XE0 403 aa15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 KYQ8NBH2 561 aa15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 PPHLN1Q8NEY8 458 aaKnown RBP15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ITFG1Q8TB96 612 aa15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 AGR3Q8TD06 166 aa15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ZNF483Q8TF39 744 aaPredicted RBP15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 PDCD6IPQ8WUM4 868 aaKnown RBP15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 RIPOR3Q96MK2 946 aa15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SLC22A12Q96S37 553 aa15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CYP2S1Q96SQ9 504 aa15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 NACA2Q9H009 215 aa15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 EBF3Q9H4W6 596 aa15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ZNF385DQ9H6B1 395 aa15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 GLOD4Q9HC38 313 aa15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 TRPC7Q9HCX4 862 aa15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CDYLQ9Y232 598 aa15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 TLR6Q9Y2C9 796 aa15.99■□□□□ 0.15
CHRFAM7A-203ENST00000401522 GOLGA8QA0A0J9YX86 632 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 GOLGA8OA6NCC3 632 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ENO4A6NNW6 628 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 TARM1B6A8C7 271 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 GOLGA8NF8WBI6 632 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 FGF10O15520 208 aaPredicted RBP15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 IRAK2O43187 625 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 AHSGP02765 367 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 PIM1P11309 404 aaPredicted RBP15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 UQCRBP14927 111 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 TFEBP19484 476 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 FSHRP23945 695 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 NUDT2P50583 147 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 KPNA1P52294 538 aaPredicted RBP15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 GEMP55040 296 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 RAB10P61026 200 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CYLC2Q14093 348 aaPredicted RBP15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 GPR158Q5T848 1215 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 RWDD4Q6NW29 188 aaKnown RBP15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SLC30A9Q6PML9 568 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 POTEHQ6S545 545 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SDCCAG8Q86SQ7 713 aaPredicted RBP15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 MIB1Q86YT6 1006 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SLC41A1Q8IVJ1 513 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CENPLQ8N0S6 344 aaPredicted RBP15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 LZTR1Q8N653 840 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ARL14EPQ8N8R7 260 aaPredicted RBP15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 KCTD4Q8WVF5 259 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 IL12RB2Q99665 862 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 WDR55Q9H6Y2 383 aaPredicted RBP15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ARHGEF38Q9NXL2 777 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 C6orf203Q9P0P8 240 aaPredicted RBP15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 BCAP29Q9UHQ4 241 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 TRAV19A0A0A6YYK7 116 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 H3BNX3 289 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 DFFAO00273 331 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 MAP3K13O43283 966 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SAT1P21673 171 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 GABRB3P28472 473 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 MTHFRP42898 656 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 KPNA2P52292 529 aaKnown RBP15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 NAGLUP54802 743 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SLC7A9P82251 487 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 TRIP10Q15642 601 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SFT2D3Q587I9 215 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 BRMS1LQ5PSV4 323 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ARMC3Q5W041 872 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 LPCAT4Q643R3 524 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CMTM8Q8IZV2 173 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 FSTL5Q8N475 847 aaPredicted RBP15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 PHC3Q8NDX5 983 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 USP33Q8TEY7 942 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SLC39A13Q96H72 371 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 BTBD9Q96Q07 612 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 TUBGCP5Q96RT8 1024 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 HAPLN3Q96S86 360 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CD207Q9UJ71 328 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 NEU3Q9UQ49 428 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 TCAF1Q9Y4C2 921 aa15.98■□□□□ 0.15
CHRFAM7A-203ENST00000401522 A0A087X1B8 175 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 FAM95CA0A1B0GW59 222 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 NEMP1O14524 444 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 AIM2O14862 343 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 MSI1O43347 362 aaKnown RBP15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 DLX3O60479 287 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 NPHS1O60500 1241 aa15.97■□□□□ 0.15
CHRFAM7A-203ENST00000401522 STMN1P16949 149 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms