RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 UGT1A4P22310 534 aa21■□□□□ 0.95
CTCF-202ENST00000401394 SLC6A2P23975 617 aa21■□□□□ 0.95
CTCF-202ENST00000401394 UGT1A3P35503 534 aa21■□□□□ 0.95
CTCF-202ENST00000401394 UGT1A5P35504 534 aa21■□□□□ 0.95
CTCF-202ENST00000401394 CLCNKBP51801 687 aa21■□□□□ 0.95
CTCF-202ENST00000401394 TRAF2Q12933 501 aa21■□□□□ 0.95
CTCF-202ENST00000401394 CBX3Q13185 183 aa21■□□□□ 0.95
CTCF-202ENST00000401394 TMEM214Q6NUQ4 689 aaKnown RBP21■□□□□ 0.95
CTCF-202ENST00000401394 PATL1Q86TB9 770 aaKnown RBP21■□□□□ 0.95
CTCF-202ENST00000401394 ANKFN1Q8N957 763 aa21■□□□□ 0.95
CTCF-202ENST00000401394 SENP8Q96LD8 212 aa21■□□□□ 0.95
CTCF-202ENST00000401394 FAM210AQ96ND0 272 aa21■□□□□ 0.95
CTCF-202ENST00000401394 SMIM14Q96QK8 99 aa21■□□□□ 0.95
CTCF-202ENST00000401394 MTG1Q9BT17 334 aaPredicted RBP21■□□□□ 0.95
CTCF-202ENST00000401394 C1orf50Q9BV19 199 aa21■□□□□ 0.95
CTCF-202ENST00000401394 F8W810 466 aa21■□□□□ 0.95
CTCF-202ENST00000401394 TREHO43280 583 aa21■□□□□ 0.95
CTCF-202ENST00000401394 SNAI1O95863 264 aaPredicted RBP21■□□□□ 0.95
CTCF-202ENST00000401394 BMP2P12643 396 aa21■□□□□ 0.95
CTCF-202ENST00000401394 RXRGP48443 463 aa21■□□□□ 0.95
CTCF-202ENST00000401394 PSMD8P48556 350 aa21■□□□□ 0.95
CTCF-202ENST00000401394 IST1P53990 364 aa21■□□□□ 0.95
CTCF-202ENST00000401394 WNT3AP56704 352 aa21■□□□□ 0.95
CTCF-202ENST00000401394 KYAT1Q16773 422 aa21■□□□□ 0.95
CTCF-202ENST00000401394 PAGE3Q5JUK9 113 aa21■□□□□ 0.95
CTCF-202ENST00000401394 Q6ZNX1 250 aa21■□□□□ 0.95
CTCF-202ENST00000401394 CNTN4Q8IWV2 1026 aa21■□□□□ 0.95
CTCF-202ENST00000401394 BPIFB6Q8NFQ5 453 aa21■□□□□ 0.95
CTCF-202ENST00000401394 UHRF1Q96T88 793 aaPredicted RBP21■□□□□ 0.95
CTCF-202ENST00000401394 MPHOSPH6Q99547 160 aaKnown RBP21■□□□□ 0.95
CTCF-202ENST00000401394 UPF3AQ9H1J1 476 aaKnown RBP21■□□□□ 0.95
CTCF-202ENST00000401394 CCM2LQ9NUG4 571 aaPredicted RBP21■□□□□ 0.95
CTCF-202ENST00000401394 MIOSQ9NXC5 875 aa21■□□□□ 0.95
CTCF-202ENST00000401394 CIDEBQ9UHD4 219 aa21■□□□□ 0.95
CTCF-202ENST00000401394 FADS3Q9Y5Q0 445 aa21■□□□□ 0.95
CTCF-202ENST00000401394 WDR90Q96KV7 1748 aa21■□□□□ 0.95
CTCF-202ENST00000401394 DDNO94850 711 aaPredicted RBP20.99■□□□□ 0.95
CTCF-202ENST00000401394 CDK14O94921 469 aa20.99■□□□□ 0.95
CTCF-202ENST00000401394 LTA4HP09960 611 aaKnown RBP20.99■□□□□ 0.95
CTCF-202ENST00000401394 CYP2C9P11712 490 aa20.99■□□□□ 0.95
CTCF-202ENST00000401394 ZBED5Q49AG3 693 aa20.99■□□□□ 0.95
CTCF-202ENST00000401394 RALGPS2Q86X27 583 aaPredicted RBP20.99■□□□□ 0.95
CTCF-202ENST00000401394 ADGRG5Q8IZF4 528 aa20.99■□□□□ 0.95
CTCF-202ENST00000401394 PARP8Q8N3A8 854 aa20.99■□□□□ 0.95
CTCF-202ENST00000401394 OR13J1Q8NGT2 312 aa20.99■□□□□ 0.95
CTCF-202ENST00000401394 TUBGCP3Q96CW5 907 aa20.99■□□□□ 0.95
CTCF-202ENST00000401394 PABPC5Q96DU9 382 aaKnown RBP20.99■□□□□ 0.95
CTCF-202ENST00000401394 TMLHEQ9NVH6 421 aa20.99■□□□□ 0.95
CTCF-202ENST00000401394 PLXNA1Q9UIW2 1896 aa20.99■□□□□ 0.95
CTCF-202ENST00000401394 J3KR12 359 aa20.99■□□□□ 0.95
CTCF-202ENST00000401394 MAN1A2O60476 641 aa20.99■□□□□ 0.95
CTCF-202ENST00000401394 BMP10O95393 424 aa20.99■□□□□ 0.95
CTCF-202ENST00000401394 FUCA1P04066 466 aa20.99■□□□□ 0.95
CTCF-202ENST00000401394 DARSP14868 501 aaKnown RBP20.99■□□□□ 0.95
CTCF-202ENST00000401394 TGFBIQ15582 683 aa20.99■□□□□ 0.95
CTCF-202ENST00000401394 ARL13BQ3SXY8 428 aa20.99■□□□□ 0.95
CTCF-202ENST00000401394 ZNF678Q5SXM1 525 aa20.99■□□□□ 0.95
CTCF-202ENST00000401394 PTGR2Q8N8N7 351 aaPredicted RBP20.99■□□□□ 0.95
CTCF-202ENST00000401394 TBC1D15Q8TC07 691 aa20.99■□□□□ 0.95
CTCF-202ENST00000401394 DQX1Q8TE96 717 aaKnown RBP20.99■□□□□ 0.95
CTCF-202ENST00000401394 VPS50Q96JG6 964 aa20.99■□□□□ 0.95
CTCF-202ENST00000401394 SEMA4BQ9NPR2 832 aaPredicted RBP20.99■□□□□ 0.95
CTCF-202ENST00000401394 PFDN4Q9NQP4 134 aa20.99■□□□□ 0.95
CTCF-202ENST00000401394 AGPAT4Q9NRZ5 378 aa20.99■□□□□ 0.95
CTCF-202ENST00000401394 IKZF3Q9UKT9 509 aa20.99■□□□□ 0.95
CTCF-202ENST00000401394 SLC25A27O95847 323 aa20.98■□□□□ 0.95
CTCF-202ENST00000401394 HGFP14210 728 aa20.98■□□□□ 0.95
CTCF-202ENST00000401394 UGP2Q16851 508 aa20.98■□□□□ 0.95
CTCF-202ENST00000401394 NTAN1Q96AB6 310 aa20.98■□□□□ 0.95
CTCF-202ENST00000401394 ACOX2Q99424 681 aa20.98■□□□□ 0.95
CTCF-202ENST00000401394 PLGRKTQ9HBL7 147 aa20.98■□□□□ 0.95
CTCF-202ENST00000401394 NT5MQ9NPB1 228 aa20.98■□□□□ 0.95
CTCF-202ENST00000401394 FAIMQ9NVQ4 179 aa20.98■□□□□ 0.95
CTCF-202ENST00000401394 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.98■□□□□ 0.95
CTCF-202ENST00000401394 RAD54BQ9Y620 910 aa20.98■□□□□ 0.95
CTCF-202ENST00000401394 A0A0U1RQS6 177 aa20.98■□□□□ 0.95
CTCF-202ENST00000401394 DYNC1LI2O43237 492 aaPredicted RBP20.98■□□□□ 0.95
CTCF-202ENST00000401394 MMP3P08254 477 aa20.98■□□□□ 0.95
CTCF-202ENST00000401394 EEF1B2P24534 225 aaKnown RBP20.98■□□□□ 0.95
CTCF-202ENST00000401394 ADRA1AP35348 466 aa20.98■□□□□ 0.95
CTCF-202ENST00000401394 CD86P42081 329 aa20.98■□□□□ 0.95
CTCF-202ENST00000401394 OR4D1Q15615 310 aa20.98■□□□□ 0.95
CTCF-202ENST00000401394 SDHAF4Q5VUM1 108 aa20.98■□□□□ 0.95
CTCF-202ENST00000401394 TWF2Q6IBS0 349 aaKnown RBP20.98■□□□□ 0.95
CTCF-202ENST00000401394 B3GALT6Q96L58 329 aa20.98■□□□□ 0.95
CTCF-202ENST00000401394 ZNF560Q96MR9 790 aa20.98■□□□□ 0.95
CTCF-202ENST00000401394 SELENONQ9NZV5 590 aa20.98■□□□□ 0.95
CTCF-202ENST00000401394 TRIP12Q14669 1992 aaPredicted RBP20.97■□□□□ 0.95
CTCF-202ENST00000401394 A0A087WXM4 84 aa20.97■□□□□ 0.95
CTCF-202ENST00000401394 HHLA1C9JL84 531 aa20.97■□□□□ 0.95
CTCF-202ENST00000401394 K7EPI3 171 aa20.97■□□□□ 0.95
CTCF-202ENST00000401394 NCAM2O15394 837 aa20.97■□□□□ 0.95
CTCF-202ENST00000401394 CD4P01730 458 aa20.97■□□□□ 0.95
CTCF-202ENST00000401394 ESRRGP62508 458 aa20.97■□□□□ 0.95
CTCF-202ENST00000401394 DSC2Q02487 901 aa20.97■□□□□ 0.95
CTCF-202ENST00000401394 SCAPQ12770 1279 aa20.97■□□□□ 0.95
CTCF-202ENST00000401394 TRAP1Q12931 704 aaKnown RBP20.97■□□□□ 0.95
CTCF-202ENST00000401394 ADRM1Q16186 407 aa20.97■□□□□ 0.95
CTCF-202ENST00000401394 SLC36A3Q495N2 470 aa20.97■□□□□ 0.95
CTCF-202ENST00000401394 SV2CQ496J9 727 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms