RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 UBE2R2Q712K3 238 aaPredicted RBP18.2■□□□□ 0.5
COL18A1-204ENST00000400337 PAGE2Q7Z2X7 111 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 C12orf42Q96LP6 360 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 KLHL1Q9NR64 748 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 EGFL7Q9UHF1 273 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 EVLQ9UI08 416 aaPredicted RBP18.2■□□□□ 0.5
COL18A1-204ENST00000400337 ATP6V1HQ9UI12 483 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 HBS1LQ9Y450 684 aaKnown RBP18.2■□□□□ 0.5
COL18A1-204ENST00000400337 POLR3HQ9Y535 204 aaPredicted RBP18.2■□□□□ 0.5
COL18A1-204ENST00000400337 TRAFD1O14545 582 aaPredicted RBP18.2■□□□□ 0.5
COL18A1-204ENST00000400337 PKMP14618 531 aaKnown RBP18.2■□□□□ 0.5
COL18A1-204ENST00000400337 SLC7A2P52569 658 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 CHN2P52757 468 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 EPS8Q12929 822 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 ARMC4Q5T2S8 1044 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 CD99L2Q8TCZ2 262 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 OR8D1Q8WZ84 308 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 OR52E6Q96RD3 313 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 AJAP1Q9UKB5 411 aaPredicted RBP18.2■□□□□ 0.5
COL18A1-204ENST00000400337 H0Y858 1186 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 VNN1O95497 513 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 NDST3O95803 873 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 SLC35G4P0C7Q5 338 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 BNIP2Q12982 314 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 ADGRD1Q6QNK2 874 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 CRELD2Q6UXH1 353 aaPredicted RBP18.19■□□□□ 0.5
COL18A1-204ENST00000400337 BPIFB6Q8NFQ5 453 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 UPF1Q92900 1129 aaKnown RBP eCLIP18.19■□□□□ 0.51e-9■■■■□ 24.8
COL18A1-204ENST00000400337 ACAT2Q9BWD1 397 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 RBPJLQ9UBG7 517 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 UGT2B4P06133 528 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 L1CAMP32004 1257 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 ASPAP45381 313 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 GSTA3Q16772 222 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 TTC23Q5W5X9 447 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 FUT10Q6P4F1 479 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 RASAL3Q86YV0 1011 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 CAMKK1Q8N5S9 505 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 ZFP28Q8NHY6 868 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 NMUR2Q9GZQ4 415 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 GRM6O15303 877 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 SLC22A3O75751 556 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 YBEYP58557 167 aaPredicted RBP18.19■□□□□ 0.5
COL18A1-204ENST00000400337 MPP1Q00013 466 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 OFCC1Q8IZS5 231 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 TBATAQ96M53 351 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 SLC39A8Q9C0K1 460 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 RFXANKO14593 260 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 IPO13O94829 963 aaKnown RBP18.19■□□□□ 0.5
COL18A1-204ENST00000400337 ADH1CP00326 375 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 SULT2A1Q06520 285 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 ATP1A4Q13733 1029 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 TRIM25Q14258 630 aaKnown RBP18.19■□□□□ 0.5
COL18A1-204ENST00000400337 MPPE1Q53F39 396 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 ANKRD49Q8WVL7 239 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 FAM124BQ9H5Z6 455 aaPredicted RBP18.19■□□□□ 0.5
COL18A1-204ENST00000400337 SOHLH2Q9NX45 425 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 MON2Q7Z3U7 1717 aa18.19■□□□□ 0.5
COL18A1-204ENST00000400337 GLYATL1P3A0A0U1RQE8 302 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.18■□□□□ 0.5
COL18A1-204ENST00000400337 ISM1B1AKI9 464 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 GCATO75600 419 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 TSPAN19P0C672 248 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 UNGP13051 313 aaPredicted RBP18.18■□□□□ 0.5
COL18A1-204ENST00000400337 ST13P50502 369 aaKnown RBP18.18■□□□□ 0.5
COL18A1-204ENST00000400337 GRM3Q14832 879 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 MAPK11Q15759 364 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 NAIF1Q69YI7 327 aaPredicted RBP18.18■□□□□ 0.5
COL18A1-204ENST00000400337 SPOCK2Q92563 424 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 ZNF232Q9UNY5 417 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 COQ4Q9Y3A0 265 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 CCL22O00626 93 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 MED26O95402 600 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 ENO2P09104 434 aaPredicted RBP18.18■□□□□ 0.5
COL18A1-204ENST00000400337 MSX2P35548 267 aaPredicted RBP18.18■□□□□ 0.5
COL18A1-204ENST00000400337 PTGIRP43119 386 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 CXCR3P49682 368 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 FSTL1Q12841 308 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 SLC51AQ86UW1 340 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 GSTCDQ8NEC7 633 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 REXO5Q96IC2 774 aaKnown RBP18.18■□□□□ 0.5
COL18A1-204ENST00000400337 SERHL2Q9H4I8 314 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 SERHLQ9NQF3 203 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 ATXN2Q99700 1313 aaKnown RBP18.18■□□□□ 0.5
COL18A1-204ENST00000400337 SEPT4O43236 478 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 ERAL1O75616 437 aaKnown RBP18.18■□□□□ 0.5
COL18A1-204ENST00000400337 ATXN1P54253 815 aaKnown RBP18.18■□□□□ 0.5
COL18A1-204ENST00000400337 DAOAP59103 153 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 RSBN1Q5VWQ0 802 aaPredicted RBP18.18■□□□□ 0.5
COL18A1-204ENST00000400337 DLK2Q6UY11 383 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 SH3GL2Q99962 352 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 ANGPT4Q9Y264 503 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 DHRS12A0PJE2 317 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 WBP4O75554 376 aaKnown RBP18.18■□□□□ 0.5
COL18A1-204ENST00000400337 MT-CYBP00156 380 aaPredicted RBP18.18■□□□□ 0.5
COL18A1-204ENST00000400337 IFNA16P05015 189 aa18.18■□□□□ 0.5
COL18A1-204ENST00000400337 RPL3P39023 403 aaKnown RBP18.18■□□□□ 0.5
COL18A1-204ENST00000400337 EIF3MQ7L2H7 374 aaKnown RBP18.18■□□□□ 0.5
COL18A1-204ENST00000400337 CENPIQ92674 756 aaPredicted RBP18.18■□□□□ 0.5
COL18A1-204ENST00000400337 HDHD2Q9H0R4 259 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms