RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 CCDC70Q6NSX1 233 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 DTD2Q96FN9 168 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 OSBPL9Q96SU4 736 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 ELF4Q99607 663 aaPredicted RBP21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 FSD1LQ9BXM9 530 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 GPR27Q9NS67 375 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 ZKSCAN5Q9Y2L8 839 aa21.21■□□□□ 0.99
TSPAN4-206ENST00000397408 CLDN7O95471 211 aa21.2■□□□□ 0.98
TSPAN4-206ENST00000397408 C1SP09871 688 aa21.2■□□□□ 0.98
TSPAN4-206ENST00000397408 PIRTP0C851 137 aa21.2■□□□□ 0.98
TSPAN4-206ENST00000397408 SDHBP21912 280 aa21.2■□□□□ 0.98
TSPAN4-206ENST00000397408 CCT8P50990 548 aa21.2■□□□□ 0.98
TSPAN4-206ENST00000397408 STC1P52823 247 aa21.2■□□□□ 0.98
TSPAN4-206ENST00000397408 CCNG2Q16589 344 aa21.2■□□□□ 0.98
TSPAN4-206ENST00000397408 Q6ZVL8 140 aa21.2■□□□□ 0.98
TSPAN4-206ENST00000397408 CBARPQ8N350 705 aaPredicted RBP21.2■□□□□ 0.98
TSPAN4-206ENST00000397408 RASGEF1CQ8N431 466 aa21.2■□□□□ 0.98
TSPAN4-206ENST00000397408 RTP4Q96DX8 246 aa21.2■□□□□ 0.98
TSPAN4-206ENST00000397408 MS4A14Q96JA4 679 aa21.2■□□□□ 0.98
TSPAN4-206ENST00000397408 TM7SF3Q9NS93 570 aa21.2■□□□□ 0.98
TSPAN4-206ENST00000397408 SNX12Q9UMY4 172 aa21.2■□□□□ 0.98
TSPAN4-206ENST00000397408 LOC285095A0A1B0GVY8 99 aa21.19■□□□□ 0.98
TSPAN4-206ENST00000397408 DFNA5O60443 496 aa21.19■□□□□ 0.98
TSPAN4-206ENST00000397408 GCATO75600 419 aa21.19■□□□□ 0.98
TSPAN4-206ENST00000397408 IFNB1P01574 187 aa21.19■□□□□ 0.98
TSPAN4-206ENST00000397408 ATXN1LP0C7T5 689 aaKnown RBP21.19■□□□□ 0.98
TSPAN4-206ENST00000397408 CHRNA4P43681 627 aa21.19■□□□□ 0.98
TSPAN4-206ENST00000397408 IL9RQ01113 521 aa21.19■□□□□ 0.98
TSPAN4-206ENST00000397408 PTSQ03393 145 aa21.19■□□□□ 0.98
TSPAN4-206ENST00000397408 MTM1Q13496 603 aa21.19■□□□□ 0.98
TSPAN4-206ENST00000397408 PDE1CQ14123 709 aaPredicted RBP21.19■□□□□ 0.98
TSPAN4-206ENST00000397408 TPRG1LQ5T0D9 272 aa21.19■□□□□ 0.98
TSPAN4-206ENST00000397408 DCP2Q8IU60 420 aaKnown RBP21.19■□□□□ 0.98
TSPAN4-206ENST00000397408 C17orf53Q8N3J3 647 aaPredicted RBP21.19■□□□□ 0.98
TSPAN4-206ENST00000397408 OXR1Q8N573 874 aa21.19■□□□□ 0.98
TSPAN4-206ENST00000397408 SLC25A41Q8N5S1 370 aa21.19■□□□□ 0.98
TSPAN4-206ENST00000397408 PLA2G15Q8NCC3 412 aa21.19■□□□□ 0.98
TSPAN4-206ENST00000397408 COG1Q8WTW3 980 aa21.19■□□□□ 0.98
TSPAN4-206ENST00000397408 PPP1R2P1Q96PQ5 205 aa21.19■□□□□ 0.98
TSPAN4-206ENST00000397408 WDR24Q96S15 920 aa21.19■□□□□ 0.98
TSPAN4-206ENST00000397408 RTKNQ9BST9 563 aa21.19■□□□□ 0.98
TSPAN4-206ENST00000397408 FICDQ9BVA6 458 aa21.19■□□□□ 0.98
TSPAN4-206ENST00000397408 ERVMER34-1Q9H9K5 563 aa21.19■□□□□ 0.98
TSPAN4-206ENST00000397408 DLL3Q9NYJ7 618 aa21.19■□□□□ 0.98
TSPAN4-206ENST00000397408 AAR2Q9Y312 384 aaKnown RBP21.19■□□□□ 0.98
TSPAN4-206ENST00000397408 A0A1B0GTQ1 180 aa21.18■□□□□ 0.98
TSPAN4-206ENST00000397408 EPOP01588 193 aa21.18■□□□□ 0.98
TSPAN4-206ENST00000397408 SLC4A1P02730 911 aa21.18■□□□□ 0.98
TSPAN4-206ENST00000397408 ITGAVP06756 1048 aa21.18■□□□□ 0.98
TSPAN4-206ENST00000397408 ZNF883P0CG24 379 aa21.18■□□□□ 0.98
TSPAN4-206ENST00000397408 STIP1P31948 543 aaKnown RBP21.18■□□□□ 0.98
TSPAN4-206ENST00000397408 ARRB1P49407 418 aaPredicted RBP21.18■□□□□ 0.98
TSPAN4-206ENST00000397408 THOP1P52888 689 aa21.18■□□□□ 0.98
TSPAN4-206ENST00000397408 INPP5AQ14642 412 aa21.18■□□□□ 0.98
TSPAN4-206ENST00000397408 SLC1A5Q15758 541 aa21.18■□□□□ 0.98
TSPAN4-206ENST00000397408 CDKN3Q16667 212 aa21.18■□□□□ 0.98
TSPAN4-206ENST00000397408 P3H1Q32P28 736 aa21.18■□□□□ 0.98
TSPAN4-206ENST00000397408 SIRPB2Q5JXA9 342 aa21.18■□□□□ 0.98
TSPAN4-206ENST00000397408 FAXCQ5TGI0 409 aa21.18■□□□□ 0.98
TSPAN4-206ENST00000397408 DRICH1Q6PGQ1 229 aaPredicted RBP21.18■□□□□ 0.98
TSPAN4-206ENST00000397408 RFLNAQ6ZTI6 216 aa21.18■□□□□ 0.98
TSPAN4-206ENST00000397408 LYSMD3Q7Z3D4 306 aa21.18■□□□□ 0.98
TSPAN4-206ENST00000397408 TECPR1Q7Z6L1 1165 aa21.18■□□□□ 0.98
TSPAN4-206ENST00000397408 KCTD5Q9NXV2 234 aa21.18■□□□□ 0.98
TSPAN4-206ENST00000397408 SMARCAL1Q9NZC9 954 aa21.18■□□□□ 0.98
TSPAN4-206ENST00000397408 CD84Q9UIB8 345 aa21.18■□□□□ 0.98
TSPAN4-206ENST00000397408 SHOC2Q9UQ13 582 aa21.18■□□□□ 0.98
TSPAN4-206ENST00000397408 ZNF711Q9Y462 761 aa21.18■□□□□ 0.98
TSPAN4-206ENST00000397408 PGRMC1O00264 195 aaKnown RBP21.17■□□□□ 0.98
TSPAN4-206ENST00000397408 TOR1BO14657 336 aa21.17■□□□□ 0.98
TSPAN4-206ENST00000397408 METTL18O95568 372 aa21.17■□□□□ 0.98
TSPAN4-206ENST00000397408 HLA-DPA1P20036 260 aa21.17■□□□□ 0.98
TSPAN4-206ENST00000397408 YPEL5P62699 121 aa21.17■□□□□ 0.98
TSPAN4-206ENST00000397408 FZD2Q14332 565 aa21.17■□□□□ 0.98
TSPAN4-206ENST00000397408 PARP6Q2NL67 630 aa21.17■□□□□ 0.98
TSPAN4-206ENST00000397408 ESRP1Q6NXG1 681 aaKnown RBP21.17■□□□□ 0.98
TSPAN4-206ENST00000397408 PELI3Q8N2H9 469 aa21.17■□□□□ 0.98
TSPAN4-206ENST00000397408 TAB3Q8N5C8 712 aaPredicted RBP21.17■□□□□ 0.98
TSPAN4-206ENST00000397408 PRELID2Q8N945 189 aa21.17■□□□□ 0.98
TSPAN4-206ENST00000397408 CCHCR1Q8TD31 782 aa21.17■□□□□ 0.98
TSPAN4-206ENST00000397408 MAGEE1Q9HCI5 957 aa21.17■□□□□ 0.98
TSPAN4-206ENST00000397408 KCND1Q9NSA2 647 aa21.17■□□□□ 0.98
TSPAN4-206ENST00000397408 TTC7AQ9ULT0 858 aaPredicted RBP21.17■□□□□ 0.98
TSPAN4-206ENST00000397408 OR1A2Q9Y585 309 aa21.17■□□□□ 0.98
TSPAN4-206ENST00000397408 SPO11Q9Y5K1 396 aa21.17■□□□□ 0.98
TSPAN4-206ENST00000397408 CNOT1A5YKK6 2376 aaKnown RBP21.17■□□□□ 0.98
TSPAN4-206ENST00000397408 DNAH14Q0VDD8 3507 aa21.16■□□□□ 0.98
TSPAN4-206ENST00000397408 SPTY2D1-AS1A0A0U1RR47 76 aa21.16■□□□□ 0.98
TSPAN4-206ENST00000397408 GOLGA6CA6NDK9 693 aa21.16■□□□□ 0.98
TSPAN4-206ENST00000397408 GOLGA6BA6NDN3 693 aa21.16■□□□□ 0.98
TSPAN4-206ENST00000397408 K7ESM1 405 aa21.16■□□□□ 0.98
TSPAN4-206ENST00000397408 AGTP01019 485 aa21.16■□□□□ 0.98
TSPAN4-206ENST00000397408 FGF1P05230 155 aa21.16■□□□□ 0.98
TSPAN4-206ENST00000397408 GOLGA6DP0CG33 693 aa21.16■□□□□ 0.98
TSPAN4-206ENST00000397408 CD59P13987 128 aa21.16■□□□□ 0.98
TSPAN4-206ENST00000397408 ID4P47928 161 aa21.16■□□□□ 0.98
TSPAN4-206ENST00000397408 SLC14A1Q13336 389 aa21.16■□□□□ 0.98
TSPAN4-206ENST00000397408 OLIG2Q13516 323 aa21.16■□□□□ 0.98
TSPAN4-206ENST00000397408 SHBQ15464 509 aa21.16■□□□□ 0.98
TSPAN4-206ENST00000397408 PARGQ86W56 976 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms