RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 RECQL5O94762 991 aaPredicted RBP8.79□□□□□ -1
CAPN3-208ENST00000397204 GFPT2O94808 682 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 PIGNO95427 931 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 CALB1P05937 261 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 KRT10P13645 584 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 HGFP14210 728 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 SERPINA4P29622 427 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 SOX5P35711 763 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 MMP12P39900 470 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 STAT1P42224 750 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 NSFP46459 744 aaKnown RBP8.79□□□□□ -1
CAPN3-208ENST00000397204 ZNF143P52747 638 aaPredicted RBP8.79□□□□□ -1
CAPN3-208ENST00000397204 NDST2P52849 883 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 GSCP56915 257 aaPredicted RBP8.79□□□□□ -1
CAPN3-208ENST00000397204 KIAA1024LP59773 190 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 B4GALNT1Q00973 533 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 FMO1Q01740 532 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 PTP4A2Q12974 167 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 HLTFQ14527 1009 aaKnown RBP eCLIP8.79□□□□□ -1
CAPN3-208ENST00000397204 TBR1Q16650 682 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 C14orf28Q4W4Y0 310 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 TCP11X2Q5H9J9 407 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 AFMIDQ63HM1 303 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 SCYL2Q6P3W7 929 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 LIPIQ6XZB0 460 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 SRLQ86TD4 932 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 PIM3Q86V86 326 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 ZFAND4Q86XD8 727 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 PHF13Q86YI8 300 aaPredicted RBP8.79□□□□□ -1
CAPN3-208ENST00000397204 CAMK1DQ8IU85 385 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 SLITRK4Q8IW52 837 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 PYROXD2Q8N2H3 581 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 NETO2Q8NC67 525 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 PLA2G15Q8NCC3 412 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 C3orf20Q8ND61 904 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 SLC20A1Q8WUM9 679 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 OR1E3Q8WZA6 343 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 USP7Q93009 1102 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 FUBP1Q96AE4 644 aaKnown RBP8.79□□□□□ -1
CAPN3-208ENST00000397204 C11orf70Q9BRQ4 267 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 SELENOOQ9BVL4 669 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 DPEP2Q9H4A9 486 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 ATP13A3Q9H7F0 1226 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 RAB6BQ9NRW1 208 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 GEMIN8Q9NWZ8 242 aaKnown RBP8.79□□□□□ -1
CAPN3-208ENST00000397204 KCTD5Q9NXV2 234 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 FZD10Q9ULW2 581 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 RNF215Q9Y6U7 377 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 PRAMEF33A0A0G2JMD5 474 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 CYSRT1A8MQ03 144 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 J3KR12 359 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 PRAMEF10O60809 474 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 CPNE6O95741 557 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 PCCBP05166 539 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 FAM87AP0C7U9 286 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 ITIH1P19827 911 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 SOX11P35716 441 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 GMPRP36959 345 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 GPR3P46089 330 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 RNF144AP50876 292 aaPredicted RBP8.78□□□□□ -1
CAPN3-208ENST00000397204 MAPK10P53779 464 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 JAM2P57087 298 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 POLR2FP61218 127 aaKnown RBP8.78□□□□□ -1
CAPN3-208ENST00000397204 BCL2L1Q07817 233 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 SQSTM1Q13501 440 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 TCEA2Q15560 299 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 HSP90AA4PQ58FG1 418 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 OXLD1Q5BKU9 147 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 ZNF574Q6ZN55 896 aaPredicted RBP8.78□□□□□ -1
CAPN3-208ENST00000397204 C17orf82Q86X59 251 aaPredicted RBP8.78□□□□□ -1
CAPN3-208ENST00000397204 KIAA1524Q8TCG1 905 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 ECHDC3Q96DC8 303 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 PDXPQ96GD0 296 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 EXOC2Q96KP1 924 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 TAAR9Q96RI9 348 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 PCDHB18PQ96TA0 734 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 CNPY3Q9BT09 278 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 TMEM168Q9H0V1 697 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 GANQ9H2C0 597 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 LRRC19Q9H756 370 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 PDFQ9HBH1 243 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 CYP4F12Q9HCS2 524 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 FGF22Q9HCT0 170 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 SAMSN1Q9NSI8 373 aaKnown RBP8.78□□□□□ -1
CAPN3-208ENST00000397204 CHD5Q8TDI0 1954 aa8.78□□□□□ -1
CAPN3-208ENST00000397204 COL27A1Q8IZC6 1860 aaPredicted RBP8.78□□□□□ -1
CAPN3-208ENST00000397204 USP9YO00507 2555 aaPredicted RBP8.77□□□□□ -1
CAPN3-208ENST00000397204 TEX15Q9BXT5 2789 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 ARHGAP42A6NI28 874 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 EIF3CLB5ME19 914 aaKnown RBP8.77□□□□□ -1.01
CAPN3-208ENST00000397204 C9orf172C9J069 976 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 HGSO14964 777 aaPredicted RBP8.77□□□□□ -1.01
CAPN3-208ENST00000397204 CCP110O43303 1012 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 WIPF1O43516 503 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 PPFIA2O75334 1257 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 PALMO75781 387 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 FGF1P05230 155 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 TPM2P07951 284 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 CCNB1P14635 433 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 DESP17661 470 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms