RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 CREB5Q02930 508 aa15.22■□□□□ 0.03
MCF2L-205ENST00000397017 PRKAA1Q13131 559 aa15.22■□□□□ 0.03
MCF2L-205ENST00000397017 CPNE9Q8IYJ1 553 aa15.22■□□□□ 0.03
MCF2L-205ENST00000397017 ACMSDQ8TDX5 336 aa15.22■□□□□ 0.03
MCF2L-205ENST00000397017 CMTM5Q96DZ9 223 aa15.22■□□□□ 0.03
MCF2L-205ENST00000397017 CDKN2AIPNLQ96HQ2 116 aa15.22■□□□□ 0.03
MCF2L-205ENST00000397017 TBC1D10AQ9BXI6 508 aa15.22■□□□□ 0.03
MCF2L-205ENST00000397017 COG4Q9H9E3 785 aa15.22■□□□□ 0.03
MCF2L-205ENST00000397017 BAIAP3O94812 1187 aa15.22■□□□□ 0.03
MCF2L-205ENST00000397017 RPL14P50914 215 aaKnown RBP15.22■□□□□ 0.03
MCF2L-205ENST00000397017 SPRED3Q2MJR0 410 aa15.22■□□□□ 0.03
MCF2L-205ENST00000397017 NT5C3BQ969T7 300 aa15.22■□□□□ 0.03
MCF2L-205ENST00000397017 KLHL32Q96NJ5 620 aa15.22■□□□□ 0.03
MCF2L-205ENST00000397017 NPEPPSL1A6NEC2 478 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 OR2AG2A6NM03 316 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 LEFTY2O00292 366 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 NR5A2O00482 541 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 PRAMEF11O60813 436 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 VIPR2P41587 438 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 SGSHP51688 502 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 DNAJC14Q6Y2X3 702 aaPredicted RBP15.21■□□□□ 0.03
MCF2L-205ENST00000397017 GPSM1Q86YR5 675 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 UMODL1-AS1Q8N2C9 162 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 PCDH20Q8N6Y1 951 aaKnown RBP15.21■□□□□ 0.03
MCF2L-205ENST00000397017 CDYL2Q8N8U2 506 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 BRSK1Q8TDC3 778 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 MYEOVQ96EZ4 313 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 PGAP3Q96FM1 320 aaPredicted RBP15.21■□□□□ 0.03
MCF2L-205ENST00000397017 EBF3Q9H4W6 596 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 ZNF334Q9HCZ1 680 aaPredicted RBP15.21■□□□□ 0.03
MCF2L-205ENST00000397017 UBXN8O00124 270 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 CHUKO15111 745 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 ANGPT2O15123 496 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 CLDN7O95471 211 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 RGRP47804 291 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 NCALDP61601 193 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 TMEM198Q66K66 360 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 USP45Q70EL2 814 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 ZNF534Q76KX8 674 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 PIGWQ7Z7B1 504 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 CLNKQ7Z7G1 428 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 SIDT2Q8NBJ9 832 aaKnown RBP15.21■□□□□ 0.03
MCF2L-205ENST00000397017 WBP2Q969T9 261 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 ZNF333Q96JL9 665 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 TDP1Q9NUW8 608 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 AURKCQ9UQB9 309 aa15.21■□□□□ 0.03
MCF2L-205ENST00000397017 TRIM24O15164 1050 aa15.21■□□□□ 0.02
MCF2L-205ENST00000397017 RHOP08100 348 aa15.21■□□□□ 0.02
MCF2L-205ENST00000397017 ATP5F1P24539 256 aaPredicted RBP15.21■□□□□ 0.02
MCF2L-205ENST00000397017 TPD52P55327 224 aaPredicted RBP15.21■□□□□ 0.02
MCF2L-205ENST00000397017 ERVFC1P60507 584 aa15.21■□□□□ 0.02
MCF2L-205ENST00000397017 NAB1Q13506 487 aa15.21■□□□□ 0.02
MCF2L-205ENST00000397017 STARD3Q14849 445 aa15.21■□□□□ 0.02
MCF2L-205ENST00000397017 TSNQ15631 228 aaKnown RBP15.21■□□□□ 0.02
MCF2L-205ENST00000397017 CD300LGQ6UXG3 332 aa15.21■□□□□ 0.02
MCF2L-205ENST00000397017 TRAPPC5Q8IUR0 188 aa15.21■□□□□ 0.02
MCF2L-205ENST00000397017 RELL1Q8IUW5 271 aa15.21■□□□□ 0.02
MCF2L-205ENST00000397017 METTL6Q8TCB7 284 aa15.21■□□□□ 0.02
MCF2L-205ENST00000397017 MED8Q96G25 268 aa15.21■□□□□ 0.02
MCF2L-205ENST00000397017 HGH1Q9BTY7 390 aa15.21■□□□□ 0.02
MCF2L-205ENST00000397017 VPS9D1Q9Y2B5 631 aa15.21■□□□□ 0.02
MCF2L-205ENST00000397017 RLFQ13129 1914 aa15.21■□□□□ 0.02
MCF2L-205ENST00000397017 PLXNB2O15031 1838 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 CAPN15O75808 1086 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 UNC5CO95185 931 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 HLA-EP13747 358 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 HOXC8P31273 242 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 RCN1Q15293 331 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 TCTN1Q2MV58 587 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 ANKS6Q68DC2 871 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 NADSYN1Q6IA69 706 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 PAQR3Q6TCH7 311 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 AFTPHQ6ULP2 937 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 TMEM25Q86YD3 366 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 RAD9AQ99638 391 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 OXCT2Q9BYC2 517 aaPredicted RBP15.2■□□□□ 0.02
MCF2L-205ENST00000397017 MRPL1Q9BYD6 325 aaKnown RBP15.2■□□□□ 0.02
MCF2L-205ENST00000397017 NOP53Q9NZM5 478 aaKnown RBP15.2■□□□□ 0.02
MCF2L-205ENST00000397017 PKD2L2Q9NZM6 624 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 OGDHLQ9ULD0 1010 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 ILVBLA1L0T0 632 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 TRMT11Q7Z4G4 463 aaKnown RBP15.2■□□□□ 0.02
MCF2L-205ENST00000397017 SPDYE1Q8NFV5 336 aaPredicted RBP15.2■□□□□ 0.02
MCF2L-205ENST00000397017 SUSD6Q92537 303 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 RTP4Q96DX8 246 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 C1orf74Q96LT6 269 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 ACTR8Q9H981 624 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 IL23AQ9NPF7 189 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 DUS2Q9NX74 493 aaKnown RBP15.2■□□□□ 0.02
MCF2L-205ENST00000397017 MOCS1Q9NZB8 636 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 TRIM43BA6NCK2 446 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 TMEM189-UBE2V1I3L0A0 370 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 SMAD6O43541 496 aaKnown RBP15.2■□□□□ 0.02
MCF2L-205ENST00000397017 PTPN4P29074 926 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 CDK7P50613 346 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 NR6A1Q15406 480 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 TTLL9Q3SXZ7 439 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 LIPMQ5VYY2 423 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 ISLR2Q6UXK2 745 aa15.2■□□□□ 0.02
MCF2L-205ENST00000397017 TRIM43Q96BQ3 446 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms