RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 LIG3P49916 1009 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 WSCD2Q2TBF2 565 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 ACCSLQ4AC99 568 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 PDPK2PQ6A1A2 396 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 ZNF449Q6P9G9 518 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 LINC00523Q86TU6 105 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 SPATS2Q86XZ4 545 aaKnown RBP10.6□□□□□ -0.71
NUP98-205ENST00000397007 RASGRP3Q8IV61 690 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 IGDCC3Q8IVU1 814 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 ZCCHC9Q8N567 271 aaKnown RBP10.6□□□□□ -0.71
NUP98-205ENST00000397007 CCDC89Q8N998 374 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 GPR26Q8NDV2 337 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 FRMD8Q9BZ67 464 aaPredicted RBP10.6□□□□□ -0.71
NUP98-205ENST00000397007 BTBD1Q9H0C5 482 aa10.6□□□□□ -0.71
NUP98-205ENST00000397007 RALGAPA1Q6GYQ0 2036 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 A0A0U1RQS6 177 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 PRKCGP05129 697 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 BPIP17213 487 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 PXNP49023 591 aaPredicted RBP10.59□□□□□ -0.71
NUP98-205ENST00000397007 ZNF423Q2M1K9 1284 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.59□□□□□ -0.71
NUP98-205ENST00000397007 GPR150Q8NGU9 434 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 ADGRE3Q9BY15 652 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 ERVMER34-1Q9H9K5 563 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 MBNL1Q9NR56 388 aaKnown RBP10.59□□□□□ -0.71
NUP98-205ENST00000397007 SOX13Q9UN79 622 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 GOLGA6L10A0A0M3HER8 536 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 LRP3O75074 770 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 FUCA1P04066 466 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 LYSMD3Q7Z3D4 306 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 MPP5Q8N3R9 675 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 SCG3Q8WXD2 468 aaKnown RBP10.59□□□□□ -0.71
NUP98-205ENST00000397007 RLN3Q8WXF3 142 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 INSM2Q96T92 566 aaPredicted RBP10.59□□□□□ -0.71
NUP98-205ENST00000397007 FICDQ9BVA6 458 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 CDH19Q9H159 772 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 ABCG8Q9H221 673 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 RAB6BQ9NRW1 208 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 HACD3Q9P035 362 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 TCAF1Q9Y4C2 921 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 PIKFYVEQ9Y2I7 2098 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 CACNA1EQ15878 2313 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 GIMD1P0DJR0 217 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 PTGER3P43115 390 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 KIAA1024LP59773 190 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 RAD51Q06609 339 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 SFSWAPQ12872 951 aaKnown RBP10.59□□□□□ -0.71
NUP98-205ENST00000397007 USP39Q53GS9 565 aaKnown RBP10.59□□□□□ -0.71
NUP98-205ENST00000397007 ARHGEF18Q6ZSZ5 1173 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 MICALCLQ6ZW33 695 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 BAHD1Q8TBE0 780 aaPredicted RBP10.59□□□□□ -0.71
NUP98-205ENST00000397007 SNF8Q96H20 258 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 RRAGDQ9NQL2 400 aaPredicted RBP10.59□□□□□ -0.71
NUP98-205ENST00000397007 UBP1Q9NZI7 540 aa10.59□□□□□ -0.71
NUP98-205ENST00000397007 PCYT1BQ9Y5K3 369 aaPredicted RBP10.59□□□□□ -0.71
NUP98-205ENST00000397007 K7ESM1 405 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 WISP3O95389 354 aaPredicted RBP10.58□□□□□ -0.72
NUP98-205ENST00000397007 CLDN7O95471 211 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 CA4P22748 312 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 CDH17Q12864 832 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 GPS1Q13098 491 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 ODF2Q5BJF6 829 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 FAXCQ5TGI0 409 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 NAPEPLDQ6IQ20 393 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 PCGF5Q86SE9 256 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 CEP112Q8N8E3 955 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 PLA2G15Q8NCC3 412 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 OR52K1Q8NGK4 314 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 IFT43Q96FT9 208 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 FCRL3Q96P31 734 aaPredicted RBP10.58□□□□□ -0.72
NUP98-205ENST00000397007 KCTD5Q9NXV2 234 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 SEPT10Q9P0V9 454 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 CHUKO15111 745 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 VILLO15195 856 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 RNASEH2AO75792 299 aaKnown RBP10.58□□□□□ -0.72
NUP98-205ENST00000397007 STK10O94804 968 aaKnown RBP10.58□□□□□ -0.72
NUP98-205ENST00000397007 FOXN2P32314 431 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 NPY2RP49146 381 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 B4GALNT1Q00973 533 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 NHLH1Q02575 133 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 SPARCL1Q14515 664 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 IRF4Q15306 451 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 TYSND1Q2T9J0 566 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 ZFYVE27Q5T4F4 411 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 KCTD16Q68DU8 428 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 USP45Q70EL2 814 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 ZNF778Q96MU6 729 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 PHOX2BQ99453 314 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 SLC17A9Q9BYT1 436 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 IRF2BPLQ9H1B7 796 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 IL26Q9NPH9 171 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 GULP1Q9UBP9 304 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 SLC17A4Q9Y2C5 497 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 ST14Q9Y5Y6 855 aa10.58□□□□□ -0.72
NUP98-205ENST00000397007 FAM237BA0A1B0GVD1 139 aa10.57□□□□□ -0.72
NUP98-205ENST00000397007 A0A1W2PQU0 124 aa10.57□□□□□ -0.72
NUP98-205ENST00000397007 IGLON5A6NGN9 336 aa10.57□□□□□ -0.72
NUP98-205ENST00000397007 CYP2A6P11509 494 aaPredicted RBP10.57□□□□□ -0.72
NUP98-205ENST00000397007 LAIR1Q6GTX8 287 aa10.57□□□□□ -0.72
NUP98-205ENST00000397007 AGAP2Q99490 1192 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms