RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 KCNJ13O60928 360 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 CALCAP01258 141 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 ANXA6P08133 673 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 HOXC13P31276 330 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 RPS6KA3P51812 740 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 GSTA3Q16772 222 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 INTS11Q5TA45 600 aaKnown RBP3.39□□□□□ -1.87
VPS13C-203ENST00000395896 BCAS3Q9H6U6 928 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 RUVBL2Q9Y230 463 aaKnown RBP3.39□□□□□ -1.87
VPS13C-203ENST00000395896 SERPINB3P29508 390 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 VHLP40337 213 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 CACNG1Q06432 222 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 PTK2BQ14289 1009 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 SLC1A5Q15758 541 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 FKBP9P1Q75LS8 142 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 OTOP2Q7RTS6 562 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 MIER2Q8N344 545 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 DCLK2Q8N568 766 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 CNTD1Q8N815 330 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 OXNAD1Q96HP4 312 aaPredicted RBP3.39□□□□□ -1.87
VPS13C-203ENST00000395896 CORO1BQ9BR76 489 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 ABCF3Q9NUQ8 709 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 ARL15Q9NXU5 204 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 SFMBT1Q9UHJ3 866 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 PTPRDP23468 1912 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 GPR89AB7ZAQ6 455 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 STK16O75716 305 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 NPPAP01160 153 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 GPR89BP0CG08 455 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 ERVK-10P10266 1014 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 PKMP14618 531 aaKnown RBP3.39□□□□□ -1.87
VPS13C-203ENST00000395896 CLNS1AP54105 237 aaKnown RBP3.39□□□□□ -1.87
VPS13C-203ENST00000395896 ECT2LQ008S8 904 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 CAMK2GQ13555 558 aaPredicted RBP3.39□□□□□ -1.87
VPS13C-203ENST00000395896 KCNC3Q14003 757 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 PDGFRLQ15198 375 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 RAP1GAP2Q684P5 730 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 NCBP2-AS2Q69YL0 99 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 CPA6Q8N4T0 437 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 STON2Q8WXE9 905 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 IRF7Q92985 503 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 ROPN1LQ96C74 230 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 SERAC1Q96JX3 654 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 FAM161BQ96MY7 647 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 BTBD10Q9BSF8 475 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 NUSAP1Q9BXS6 441 aaKnown RBP3.39□□□□□ -1.87
VPS13C-203ENST00000395896 CDHR5Q9HBB8 845 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 GMIPQ9P107 970 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 ACTN3Q08043 901 aaPredicted RBP3.39□□□□□ -1.87
VPS13C-203ENST00000395896 GRAMD1BQ3KR37 738 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 CLNKQ7Z7G1 428 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 SCUBE1Q8IWY4 988 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 CCDC185Q8N715 623 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 MAGEE1Q9HCI5 957 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 DCLK1O15075 740 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 CFLARO15519 480 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 C8GP07360 202 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 SRPRAP08240 638 aaKnown RBP3.39□□□□□ -1.87
VPS13C-203ENST00000395896 MTX3Q5HYI7 312 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 SNX20Q7Z614 316 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 BANPQ8N9N5 519 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 SLC26A7Q8TE54 656 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 TOP1MTQ969P6 601 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 RANBP9Q96S59 729 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 ING2Q9H160 280 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 OGDHLQ9ULD0 1010 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 SLC27A6Q9Y2P4 619 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 TMED5Q9Y3A6 229 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 PCDHGA2Q9Y5H1 932 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 NOTCH3Q9UM47 2321 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 AGPSO00116 658 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 KPNA3O00505 521 aaPredicted RBP3.39□□□□□ -1.87
VPS13C-203ENST00000395896 SOX30O94993 753 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 BAG2O95816 211 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 MYBL2P10244 700 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 LBPP18428 481 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 ME2P23368 584 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 GJA8P48165 433 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 BLKP51451 505 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 CSHL1Q14406 222 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 PTPRNQ16849 979 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 UBR7Q8N806 425 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 IMP4Q96G21 291 aaKnown RBP3.39□□□□□ -1.87
VPS13C-203ENST00000395896 PLEKHG4BQ96PX9 1271 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 C1orf21Q9H246 121 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 MFSD1Q9H3U5 465 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 FAM83DQ9H4H8 585 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 NDUFAF1Q9Y375 327 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 TELO2Q9Y4R8 837 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 PCDHGA11Q9Y5H2 935 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 CEP295Q9C0D2 2601 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 FAM159BA6NKW6 160 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 SLC38A8A6NNN8 435 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 CACNB4O00305 520 aaPredicted RBP3.39□□□□□ -1.87
VPS13C-203ENST00000395896 PLIN3O60664 434 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 ENO1P06733 434 aaKnown RBP3.39□□□□□ -1.87
VPS13C-203ENST00000395896 KITP10721 976 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 RAD23AP54725 363 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 BST1Q10588 318 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 RRM2BQ7LG56 351 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms