RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 WDR91A4D1P6 747 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 PRRT4C9JH25 899 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 ANKRD65E5RJM6 399 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 SNAP91O60641 907 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 VAPBO95292 243 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 TOP3BO95985 862 aaKnown RBP15.15■□□□□ 0.02
SCAF11-204ENST00000395454 POLR2EP19388 210 aaKnown RBP15.15■□□□□ 0.02
SCAF11-204ENST00000395454 PSMA3P25788 255 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 GRIA2P42262 883 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 OCRLQ01968 901 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 LAMB3Q13751 1172 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 RNF187Q5TA31 235 aaPredicted RBP15.15■□□□□ 0.02
SCAF11-204ENST00000395454 N4BP2L1Q5TBK1 243 aaPredicted RBP15.15■□□□□ 0.02
SCAF11-204ENST00000395454 ATG16L1Q676U5 607 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 MBLAC2Q68D91 279 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 LMNTD2Q8IXW0 634 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 SIX5Q8N196 739 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 DCAF4L2Q8NA75 395 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 OR13J1Q8NGT2 312 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 WFIKKN2Q8TEU8 576 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 SORCS1Q8WY21 1168 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 SLC2A6Q9UGQ3 507 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 VPS51Q9UID3 782 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 GGT7Q9UJ14 662 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 BPTFQ12830 3046 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 ANKRD36A6QL64 1941 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 SLC7A4O43246 635 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 LDB2O43679 373 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 ZMPSTE24O75844 475 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 AHSGP02765 367 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 SERPINF2P08697 491 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 MAGEA9P43362 315 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 PLK1P53350 603 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 ITKQ08881 620 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 NSUN2Q08J23 767 aaKnown RBP eCLIP15.15■□□□□ 0.02
SCAF11-204ENST00000395454 GRSF1Q12849 480 aaKnown RBP eCLIP15.15■□□□□ 0.02
SCAF11-204ENST00000395454 ILF2Q12905 390 aaKnown RBP15.15■□□□□ 0.02
SCAF11-204ENST00000395454 DMC1Q14565 340 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 CCDC153Q494R4 210 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 CES4AQ5XG92 561 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 LINGO4Q6UY18 593 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 ZNF852Q6ZMS4 543 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 KIAA0907Q7Z7F0 614 aaPredicted RBP15.15■□□□□ 0.02
SCAF11-204ENST00000395454 CMC1Q7Z7K0 106 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 SUGP1Q8IWZ8 645 aaKnown RBP15.15■□□□□ 0.02
SCAF11-204ENST00000395454 OR6Y1Q8NGX8 325 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 ACDQ96AP0 544 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 RPL10LQ96L21 214 aaKnown RBP15.15■□□□□ 0.02
SCAF11-204ENST00000395454 ANKRD6Q9Y2G4 727 aa15.15■□□□□ 0.02
SCAF11-204ENST00000395454 ARIH1Q9Y4X5 557 aaPredicted RBP15.15■□□□□ 0.02
SCAF11-204ENST00000395454 KRBA1A5PL33 1030 aa15.14■□□□□ 0.01
SCAF11-204ENST00000395454 MAN2B1O00754 1011 aa15.14■□□□□ 0.01
SCAF11-204ENST00000395454 CD160O95971 181 aa15.14■□□□□ 0.01
SCAF11-204ENST00000395454 ATP5BP06576 529 aaKnown RBP15.14■□□□□ 0.01
SCAF11-204ENST00000395454 TROVE2P10155 538 aaKnown RBP eCLIP15.14■□□□□ 0.01
SCAF11-204ENST00000395454 CTSOP43234 321 aaPredicted RBP15.14■□□□□ 0.01
SCAF11-204ENST00000395454 SCTRP47872 440 aa15.14■□□□□ 0.01
SCAF11-204ENST00000395454 ARF5P84085 180 aa15.14■□□□□ 0.01
SCAF11-204ENST00000395454 PRKCQQ04759 706 aa15.14■□□□□ 0.01
SCAF11-204ENST00000395454 BST1Q10588 318 aa15.14■□□□□ 0.01
SCAF11-204ENST00000395454 GRM3Q14832 879 aa15.14■□□□□ 0.01
SCAF11-204ENST00000395454 PCLAFQ15004 111 aa15.14■□□□□ 0.01
SCAF11-204ENST00000395454 PPM1JQ5JR12 505 aa15.14■□□□□ 0.01
SCAF11-204ENST00000395454 NUDCD3Q8IVD9 361 aa15.14■□□□□ 0.01
SCAF11-204ENST00000395454 SLC25A41Q8N5S1 370 aa15.14■□□□□ 0.01
SCAF11-204ENST00000395454 FITM2Q8N6M3 262 aa15.14■□□□□ 0.01
SCAF11-204ENST00000395454 CALML6Q8TD86 181 aa15.14■□□□□ 0.01
SCAF11-204ENST00000395454 CYB5D2Q8WUJ1 264 aa15.14■□□□□ 0.01
SCAF11-204ENST00000395454 MECRQ9BV79 373 aa15.14■□□□□ 0.01
SCAF11-204ENST00000395454 ELOVL2Q9NXB9 296 aa15.14■□□□□ 0.01
SCAF11-204ENST00000395454 NDRG2Q9UN36 371 aaKnown RBP15.14■□□□□ 0.01
SCAF11-204ENST00000395454 A0A096LPK6 155 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 SHISA7A6NL88 538 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 NDST3O95803 873 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 EGFP01133 1207 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 C2P06681 752 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 DLDP09622 509 aaKnown RBP15.13■□□□□ 0.01
SCAF11-204ENST00000395454 COL6A2P12110 1019 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 DRD1P21728 446 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 SLC1A2P43004 574 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 SEC13P55735 322 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 ECT2LQ008S8 904 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 SULT2A1Q06520 285 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 BNIP1Q12981 228 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 EIF4HQ15056 248 aaKnown RBP15.13■□□□□ 0.01
SCAF11-204ENST00000395454 CYTH1Q15438 398 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 INO80DQ53TQ3 878 aaPredicted RBP15.13■□□□□ 0.01
SCAF11-204ENST00000395454 TMEM196Q5HYL7 178 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 RETSATQ6NUM9 610 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 NEPROQ6NW34 567 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 DENND6AQ8IWF6 608 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 ACVR1CQ8NER5 493 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 GABPB2Q8TAK5 448 aaPredicted RBP15.13■□□□□ 0.01
SCAF11-204ENST00000395454 C1QTNF1Q9BXJ1 281 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 TRIM55Q9BYV6 548 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 MFSD1Q9H3U5 465 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 TMEM216Q9P0N5 145 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 ACTL7AQ9Y615 435 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 CXorf51AA0A1B0GTR3 108 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 ANTXRLA6NF34 631 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms