RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 TRAFD1O14545 582 aaPredicted RBP21.14■□□□□ 0.97
TRAF4-203ENST00000394925 ECEL1O95672 775 aa21.14■□□□□ 0.97
TRAF4-203ENST00000394925 TPM2P07951 284 aa21.14■□□□□ 0.97
TRAF4-203ENST00000394925 FGF3P11487 239 aaPredicted RBP21.14■□□□□ 0.97
TRAF4-203ENST00000394925 MYCLP1P12525 358 aaPredicted RBP21.14■□□□□ 0.97
TRAF4-203ENST00000394925 AK4P27144 223 aaPredicted RBP21.14■□□□□ 0.97
TRAF4-203ENST00000394925 OGDHQ02218 1023 aa21.14■□□□□ 0.97
TRAF4-203ENST00000394925 ILF3Q12906 894 aaKnown RBP eCLIP21.14■□□□□ 0.97
TRAF4-203ENST00000394925 BIRC2Q13490 618 aa21.14■□□□□ 0.97
TRAF4-203ENST00000394925 PPP1R15BQ5SWA1 713 aa21.14■□□□□ 0.97
TRAF4-203ENST00000394925 ARHGAP36Q6ZRI8 547 aa21.14■□□□□ 0.97
TRAF4-203ENST00000394925 ZNF438Q7Z4V0 828 aa21.14■□□□□ 0.97
TRAF4-203ENST00000394925 NKD1Q969G9 470 aa21.14■□□□□ 0.97
TRAF4-203ENST00000394925 PMEPA1Q969W9 287 aa21.14■□□□□ 0.97
TRAF4-203ENST00000394925 NUS1Q96E22 293 aa21.14■□□□□ 0.97
TRAF4-203ENST00000394925 CCDC74BQ96LY2 380 aa21.14■□□□□ 0.97
TRAF4-203ENST00000394925 PCMTD1Q96MG8 357 aaPredicted RBP21.14■□□□□ 0.97
TRAF4-203ENST00000394925 TAAR9Q96RI9 348 aa21.14■□□□□ 0.97
TRAF4-203ENST00000394925 SLC12A9Q9BXP2 914 aa21.14■□□□□ 0.97
TRAF4-203ENST00000394925 GSDMCQ9BYG8 508 aa21.14■□□□□ 0.97
TRAF4-203ENST00000394925 DHX35Q9H5Z1 703 aaKnown RBP21.14■□□□□ 0.97
TRAF4-203ENST00000394925 PHPT1Q9NRX4 125 aaPredicted RBP21.14■□□□□ 0.97
TRAF4-203ENST00000394925 TAAR2Q9P1P5 351 aa21.14■□□□□ 0.97
TRAF4-203ENST00000394925 B4GALT6Q9UBX8 382 aa21.14■□□□□ 0.97
TRAF4-203ENST00000394925 SIK3Q9Y2K2 1263 aa21.14■□□□□ 0.97
TRAF4-203ENST00000394925 DFFAO00273 331 aa21.13■□□□□ 0.97
TRAF4-203ENST00000394925 HGSO14964 777 aaPredicted RBP21.13■□□□□ 0.97
TRAF4-203ENST00000394925 DAPK3O43293 454 aa21.13■□□□□ 0.97
TRAF4-203ENST00000394925 FUCA1P04066 466 aa21.13■□□□□ 0.97
TRAF4-203ENST00000394925 DESP17661 470 aa21.13■□□□□ 0.97
TRAF4-203ENST00000394925 CD1CP29017 333 aa21.13■□□□□ 0.97
TRAF4-203ENST00000394925 GNPDA1P46926 289 aa21.13■□□□□ 0.97
TRAF4-203ENST00000394925 ATP1A2P50993 1020 aa21.13■□□□□ 0.97
TRAF4-203ENST00000394925 ARSDP51689 593 aa21.13■□□□□ 0.97
TRAF4-203ENST00000394925 TLE1Q04724 770 aa21.13■□□□□ 0.97
TRAF4-203ENST00000394925 NSUN2Q08J23 767 aaKnown RBP eCLIP21.13■□□□□ 0.97
TRAF4-203ENST00000394925 CA9Q16790 459 aa21.13■□□□□ 0.97
TRAF4-203ENST00000394925 DENND2CQ68D51 928 aa21.13■□□□□ 0.97
TRAF4-203ENST00000394925 SLC30A9Q6PML9 568 aa21.13■□□□□ 0.97
TRAF4-203ENST00000394925 HEATR4Q86WZ0 1026 aa21.13■□□□□ 0.97
TRAF4-203ENST00000394925 ARHGAP12Q8IWW6 846 aa21.13■□□□□ 0.97
TRAF4-203ENST00000394925 PATE1Q8WXA2 126 aa21.13■□□□□ 0.97
TRAF4-203ENST00000394925 COQ10AQ96MF6 247 aa21.13■□□□□ 0.97
TRAF4-203ENST00000394925 AGPAT1Q99943 283 aa21.13■□□□□ 0.97
TRAF4-203ENST00000394925 ZFC3H1O60293 1989 aaKnown RBP21.12■□□□□ 0.97
TRAF4-203ENST00000394925 TTC24A2A3L6 582 aaPredicted RBP21.12■□□□□ 0.97
TRAF4-203ENST00000394925 ZW10O43264 779 aa21.12■□□□□ 0.97
TRAF4-203ENST00000394925 CEACAM5P06731 702 aa21.12■□□□□ 0.97
TRAF4-203ENST00000394925 SRSF1Q07955 248 aaKnown RBP eCLIP21.12■□□□□ 0.971e-7■■■■□ 23.8
TRAF4-203ENST00000394925 RFTN1Q14699 578 aaPredicted RBP21.12■□□□□ 0.97
TRAF4-203ENST00000394925 NR1D2Q14995 579 aa21.12■□□□□ 0.97
TRAF4-203ENST00000394925 CLPPQ16740 277 aaPredicted RBP21.12■□□□□ 0.97
TRAF4-203ENST00000394925 CT47A1Q5JQC4 288 aaPredicted RBP21.12■□□□□ 0.97
TRAF4-203ENST00000394925 CDKAL1Q5VV42 579 aa21.12■□□□□ 0.97
TRAF4-203ENST00000394925 NKAIN2Q5VXU1 208 aa21.12■□□□□ 0.97
TRAF4-203ENST00000394925 PTRH1Q86Y79 214 aaKnown RBP21.12■□□□□ 0.97
TRAF4-203ENST00000394925 IL22RA1Q8N6P7 574 aa21.12■□□□□ 0.97
TRAF4-203ENST00000394925 TRNAU1APQ9NX07 287 aaKnown RBP21.12■□□□□ 0.97
TRAF4-203ENST00000394925 SUFUQ9UMX1 484 aa21.12■□□□□ 0.97
TRAF4-203ENST00000394925 NBASA2RRP1 2371 aa21.12■□□□□ 0.97
TRAF4-203ENST00000394925 ERCC2P18074 760 aa21.11■□□□□ 0.97
TRAF4-203ENST00000394925 LIMK2P53671 638 aa21.11■□□□□ 0.97
TRAF4-203ENST00000394925 AP1S1P61966 158 aa21.11■□□□□ 0.97
TRAF4-203ENST00000394925 IL10RBQ08334 325 aa21.11■□□□□ 0.97
TRAF4-203ENST00000394925 CNGA3Q16281 694 aa21.11■□□□□ 0.97
TRAF4-203ENST00000394925 BORAQ6PGQ7 559 aa21.11■□□□□ 0.97
TRAF4-203ENST00000394925 RFX8Q6ZV50 586 aa21.11■□□□□ 0.97
TRAF4-203ENST00000394925 MCOLN2Q8IZK6 566 aa21.11■□□□□ 0.97
TRAF4-203ENST00000394925 NPWQ8N729 165 aa21.11■□□□□ 0.97
TRAF4-203ENST00000394925 NEK11Q8NG66 645 aa21.11■□□□□ 0.97
TRAF4-203ENST00000394925 ENOX1Q8TC92 643 aaKnown RBP21.11■□□□□ 0.97
TRAF4-203ENST00000394925 PDCD6IPQ8WUM4 868 aaKnown RBP21.11■□□□□ 0.97
TRAF4-203ENST00000394925 PTCD2Q8WV60 388 aaKnown RBP21.11■□□□□ 0.97
TRAF4-203ENST00000394925 ART4Q93070 314 aa21.11■□□□□ 0.97
TRAF4-203ENST00000394925 KCTD15Q96SI1 283 aaPredicted RBP21.11■□□□□ 0.97
TRAF4-203ENST00000394925 TEX101Q9BY14 249 aa21.11■□□□□ 0.97
TRAF4-203ENST00000394925 FRMD8Q9BZ67 464 aaPredicted RBP21.11■□□□□ 0.97
TRAF4-203ENST00000394925 NUP62CLQ9H1M0 184 aa21.11■□□□□ 0.97
TRAF4-203ENST00000394925 ADNPQ9H2P0 1102 aa21.11■□□□□ 0.97
TRAF4-203ENST00000394925 PCSK1NQ9UHG2 260 aa21.11■□□□□ 0.97
TRAF4-203ENST00000394925 PCDHGC4Q9Y5F7 938 aa21.11■□□□□ 0.97
TRAF4-203ENST00000394925 PCDHGA3Q9Y5H0 932 aa21.11■□□□□ 0.97
TRAF4-203ENST00000394925 B3GALT1Q9Y5Z6 326 aa21.11■□□□□ 0.97
TRAF4-203ENST00000394925 GOLGA6CA6NDK9 693 aa21.1■□□□□ 0.97
TRAF4-203ENST00000394925 GOLGA6BA6NDN3 693 aa21.1■□□□□ 0.97
TRAF4-203ENST00000394925 GOLGA6DP0CG33 693 aa21.1■□□□□ 0.97
TRAF4-203ENST00000394925 LIFP15018 202 aa21.1■□□□□ 0.97
TRAF4-203ENST00000394925 MPSTP25325 297 aa21.1■□□□□ 0.97
TRAF4-203ENST00000394925 PSMA2P25787 234 aa21.1■□□□□ 0.97
TRAF4-203ENST00000394925 UGT1A3P35503 534 aa21.1■□□□□ 0.97
TRAF4-203ENST00000394925 GPR3P46089 330 aa21.1■□□□□ 0.97
TRAF4-203ENST00000394925 RENBPP51606 427 aa21.1■□□□□ 0.97
TRAF4-203ENST00000394925 CTBSQ01459 385 aa21.1■□□□□ 0.97
TRAF4-203ENST00000394925 TRA2AQ13595 282 aaKnown RBP eCLIP21.1■□□□□ 0.97
TRAF4-203ENST00000394925 ERMARDQ5T6L9 678 aa21.1■□□□□ 0.97
TRAF4-203ENST00000394925 ACAD10Q6JQN1 1059 aa21.1■□□□□ 0.97
TRAF4-203ENST00000394925 NAGSQ8N159 534 aa21.1■□□□□ 0.97
TRAF4-203ENST00000394925 PSKH2Q96QS6 385 aa21.1■□□□□ 0.97
TRAF4-203ENST00000394925 SNRNP25Q9BV90 132 aaKnown RBP21.1■□□□□ 0.97
TRAF4-203ENST00000394925 GOLGA6AQ9NYA3 693 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms