RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 MS4A4AQ96JQ5 239 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 DACH2Q96NX9 599 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 RPRD1AQ96P16 312 aaPredicted RBP13.25□□□□□ -0.29
NFKB1-202ENST00000394820 TCF12Q99081 682 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 ADI1Q9BV57 179 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 OSBPL11Q9BXB4 747 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 VRTNQ9H8Y1 702 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 PLGRKTQ9HBL7 147 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 LATS2Q9NRM7 1088 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 MOCS1Q9NZB8 636 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 A0A1W2PQ67 120 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 GSNP06396 782 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 TRPC1P48995 793 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 POU4F1Q01851 419 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 TWF1Q12792 350 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 DPYSL2Q16555 572 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 SLC25A52Q3SY17 297 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 PAGE2BQ5JRK9 111 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 FGD3Q5JSP0 725 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 CHSY3Q70JA7 882 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 CIR1Q86X95 450 aaPredicted RBP13.24□□□□□ -0.29
NFKB1-202ENST00000394820 PCED1BQ96HM7 432 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 NSMCE2Q96MF7 247 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 PRICKLE1Q96MT3 831 aaPredicted RBP13.24□□□□□ -0.29
NFKB1-202ENST00000394820 CDK15Q96Q40 435 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 C1orf21Q9H246 121 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 AMBNQ9NP70 447 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 EXOSC4Q9NPD3 245 aaKnown RBP13.24□□□□□ -0.29
NFKB1-202ENST00000394820 POLE4Q9NR33 117 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 MTMR10Q9NXD2 777 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 ZNHIT2Q9UHR6 403 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 C7orf72A4D263 438 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 MYADML2A6NDP7 307 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 GLTPD2A6NH11 291 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 UBXN8O00124 270 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 BTN3A1O00481 513 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 VILLO15195 856 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 CHRNB3Q05901 458 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 VAC14Q08AM6 782 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 SIM2Q14190 667 aaPredicted RBP13.24□□□□□ -0.29
NFKB1-202ENST00000394820 FRG1Q14331 258 aaKnown RBP13.24□□□□□ -0.29
NFKB1-202ENST00000394820 ZNF789Q5FWF6 425 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 LDLRAD1Q5T700 205 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 RNF19BQ6ZMZ0 732 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 CLEC20AQ6ZU45 233 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 PLD3Q8IV08 490 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 FAM126BQ8IXS8 530 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 ZCCHC7Q8N3Z6 543 aaKnown RBP13.24□□□□□ -0.29
NFKB1-202ENST00000394820 LRCH3Q96II8 777 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 VPS45Q9NRW7 570 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 VTI1BQ9UEU0 232 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 TRIM43BA6NCK2 446 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 ABCB1P08183 1280 aaPredicted RBP13.24□□□□□ -0.29
NFKB1-202ENST00000394820 EFNA1P20827 205 aaPredicted RBP13.24□□□□□ -0.29
NFKB1-202ENST00000394820 PRKACGP22612 351 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 MAGEA10P43363 369 aaPredicted RBP13.24□□□□□ -0.29
NFKB1-202ENST00000394820 IST1P53990 364 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 CYP4F2P78329 520 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 CYP4F3Q08477 520 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 CCDC85BQ15834 202 aaPredicted RBP13.24□□□□□ -0.29
NFKB1-202ENST00000394820 SCAMP5Q8TAC9 235 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 TBATAQ96M53 351 aa13.24□□□□□ -0.29
NFKB1-202ENST00000394820 C6orf62Q9GZU0 229 aaPredicted RBP13.24□□□□□ -0.29
NFKB1-202ENST00000394820 ARID2Q68CP9 1835 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 SOCS2O14508 198 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 TBC1D4O60343 1298 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 RSL1D1O76021 490 aaKnown RBP13.23□□□□□ -0.29
NFKB1-202ENST00000394820 ANXA9O76027 345 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 AP2A1O95782 977 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 PNPLA4P41247 253 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 ZNF534Q76KX8 674 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 ZNF555Q8NEP9 628 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 PSMA8Q8TAA3 256 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 DLG3Q92796 817 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 RASSF1Q9NS23 344 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 MIOSQ9NXC5 875 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 TRIM17Q9Y577 477 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 MAGED1Q9Y5V3 778 aaPredicted RBP13.23□□□□□ -0.29
NFKB1-202ENST00000394820 F8W810 466 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 SLCO1B7G3V0H7 640 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 IL7RP16871 459 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 ZNF37AP17032 561 aaPredicted RBP13.23□□□□□ -0.29
NFKB1-202ENST00000394820 ELK4P28324 431 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 CD52P31358 61 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 WNT3AP56704 352 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 MTPNP58546 118 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 TAZQ16635 292 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 ARNTL2Q8WYA1 636 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 HSFY1Q96LI6 401 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 PPP1R10Q96QC0 940 aaKnown RBP13.23□□□□□ -0.29
NFKB1-202ENST00000394820 RIBC2Q9H4K1 309 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 KIF17Q9P2E2 1029 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 AASSQ9UDR5 926 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 FZD10Q9ULW2 581 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 AAR2Q9Y312 384 aaKnown RBP13.23□□□□□ -0.29
NFKB1-202ENST00000394820 SH3GLB1Q9Y371 365 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 LOC100506127A0A0U1RQW1 187 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 SMIM35A0A1B0GVV1 85 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 PIP5K1BO14986 540 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 CDH2P19022 906 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms