RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 CKMP06732 381 aa15.08■□□□□ 0
GPC3-202ENST00000394299 CTPS1P17812 591 aa15.08■□□□□ 0
GPC3-202ENST00000394299 ATP5F1P24539 256 aaPredicted RBP15.08■□□□□ 0
GPC3-202ENST00000394299 CPOXP36551 454 aa15.08■□□□□ 0
GPC3-202ENST00000394299 PFKPQ01813 784 aa15.08■□□□□ 0
GPC3-202ENST00000394299 SLC14A2Q15849 920 aa15.08■□□□□ 0
GPC3-202ENST00000394299 ACSBG2Q5FVE4 666 aa15.08■□□□□ 0
GPC3-202ENST00000394299 SEL1L3Q68CR1 1132 aa15.08■□□□□ 0
GPC3-202ENST00000394299 MRNIPQ6NTE8 343 aa15.08■□□□□ 0
GPC3-202ENST00000394299 FAM43BQ6ZT52 329 aaPredicted RBP15.08■□□□□ 0
GPC3-202ENST00000394299 PIANPQ8IYJ0 282 aa15.08■□□□□ 0
GPC3-202ENST00000394299 KDM1BQ8NB78 822 aa15.08■□□□□ 0
GPC3-202ENST00000394299 KLHL23Q8NBE8 558 aa15.08■□□□□ 0
GPC3-202ENST00000394299 DDI1Q8WTU0 396 aa15.08■□□□□ 0
GPC3-202ENST00000394299 ALG14Q96F25 216 aa15.08■□□□□ 0
GPC3-202ENST00000394299 STN1Q9H668 368 aaKnown RBP15.08■□□□□ 0
GPC3-202ENST00000394299 TCF7L2Q9NQB0 619 aa15.08■□□□□ 0
GPC3-202ENST00000394299 NLE1Q9NVX2 485 aaPredicted RBP15.08■□□□□ 0
GPC3-202ENST00000394299 LHX3Q9UBR4 397 aa15.08■□□□□ 0
GPC3-202ENST00000394299 FKBPLQ9UIM3 349 aa15.08■□□□□ 0
GPC3-202ENST00000394299 RANBP2P49792 3224 aaKnown RBP15.08■□□□□ 0
GPC3-202ENST00000394299 LRRC14BA6NHZ5 514 aa15.07■□□□□ 0
GPC3-202ENST00000394299 OR1I1O60431 355 aa15.07■□□□□ 0
GPC3-202ENST00000394299 H2AFYO75367 372 aaKnown RBP15.07■□□□□ 0
GPC3-202ENST00000394299 LUC7L3O95232 432 aaKnown RBP15.07■□□□□ 0
GPC3-202ENST00000394299 CXCL14O95715 111 aa15.07■□□□□ 0
GPC3-202ENST00000394299 LINC00271P0C7V0 271 aa15.07■□□□□ 0
GPC3-202ENST00000394299 SERPINB5P36952 375 aa15.07■□□□□ 0
GPC3-202ENST00000394299 CDH18Q13634 790 aa15.07■□□□□ 0
GPC3-202ENST00000394299 FBXO48Q5FWF7 155 aa15.07■□□□□ 0
GPC3-202ENST00000394299 SH2D4BQ5SQS7 431 aa15.07■□□□□ 0
GPC3-202ENST00000394299 PSAPL1Q6NUJ1 521 aa15.07■□□□□ 0
GPC3-202ENST00000394299 Q6ZNB5 142 aa15.07■□□□□ 0
GPC3-202ENST00000394299 LCA5Q86VQ0 697 aa15.07■□□□□ 0
GPC3-202ENST00000394299 ZBP1Q9H171 429 aa15.07■□□□□ 0
GPC3-202ENST00000394299 TLR9Q9NR96 1032 aa15.07■□□□□ 0
GPC3-202ENST00000394299 HCFC1R1Q9NWW0 138 aa15.07■□□□□ 0
GPC3-202ENST00000394299 GTSE1Q9NYZ3 720 aa15.07■□□□□ 0
GPC3-202ENST00000394299 NCKIPSDQ9NZQ3 722 aa15.07■□□□□ 0
GPC3-202ENST00000394299 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.07■□□□□ 0
GPC3-202ENST00000394299 CFAP97Q9P2B7 532 aa15.07■□□□□ 0
GPC3-202ENST00000394299 PCDHB9Q9Y5E1 797 aa15.07■□□□□ 0
GPC3-202ENST00000394299 PRRC2BQ5JSZ5 2229 aaKnown RBP15.07■□□□□ 0
GPC3-202ENST00000394299 H3BMM5 538 aa15.07■□□□□ 0
GPC3-202ENST00000394299 CRTAMO95727 393 aa15.07■□□□□ 0
GPC3-202ENST00000394299 ALPIP09923 528 aa15.07■□□□□ 0
GPC3-202ENST00000394299 FDXRP22570 491 aa15.07■□□□□ 0
GPC3-202ENST00000394299 RFC2P35250 354 aa15.07■□□□□ 0
GPC3-202ENST00000394299 STC1P52823 247 aa15.07■□□□□ 0
GPC3-202ENST00000394299 PRKAA1Q13131 559 aa15.07■□□□□ 0
GPC3-202ENST00000394299 RFTN1Q14699 578 aaPredicted RBP15.07■□□□□ 0
GPC3-202ENST00000394299 SETMARQ53H47 684 aaPredicted RBP15.07■□□□□ 0
GPC3-202ENST00000394299 NXNQ6DKJ4 435 aa15.07■□□□□ 0
GPC3-202ENST00000394299 NCEH1Q6PIU2 408 aa15.07■□□□□ 0
GPC3-202ENST00000394299 CAMK1DQ8IU85 385 aa15.07■□□□□ 0
GPC3-202ENST00000394299 EID2BQ96D98 161 aa15.07■□□□□ 0
GPC3-202ENST00000394299 TSPAN17Q96FV3 270 aa15.07■□□□□ 0
GPC3-202ENST00000394299 RNPEPL1Q9HAU8 725 aa15.07■□□□□ 0
GPC3-202ENST00000394299 CXXC1Q9P0U4 656 aaPredicted RBP15.07■□□□□ 0
GPC3-202ENST00000394299 MED16Q9Y2X0 877 aa15.07■□□□□ 0
GPC3-202ENST00000394299 GFRA2O00451 464 aa15.06■□□□□ 0
GPC3-202ENST00000394299 PPP6CO00743 305 aa15.06■□□□□ 0
GPC3-202ENST00000394299 SKAP2O75563 359 aaPredicted RBP15.06■□□□□ 0
GPC3-202ENST00000394299 IPO13O94829 963 aaKnown RBP15.06■□□□□ 0
GPC3-202ENST00000394299 OLFM2O95897 454 aa15.06■□□□□ 0
GPC3-202ENST00000394299 MYL4P12829 197 aa15.06■□□□□ 0
GPC3-202ENST00000394299 DNAJB1P25685 340 aa15.06■□□□□ 0
GPC3-202ENST00000394299 GJA8P48165 433 aa15.06■□□□□ 0
GPC3-202ENST00000394299 PPP3CCP48454 512 aa15.06■□□□□ 0
GPC3-202ENST00000394299 RHOAP61586 193 aa15.06■□□□□ 0
GPC3-202ENST00000394299 ACAP2Q15057 778 aa15.06■□□□□ 0
GPC3-202ENST00000394299 TAF1AQ15573 450 aaPredicted RBP15.06■□□□□ 0
GPC3-202ENST00000394299 PPM1LQ5SGD2 360 aa15.06■□□□□ 0
GPC3-202ENST00000394299 WASHC2DQ5SRD0 308 aa15.06■□□□□ 0
GPC3-202ENST00000394299 FAM45BPQ6NSW5 357 aa15.06■□□□□ 0
GPC3-202ENST00000394299 FRMD7Q6ZUT3 714 aa15.06■□□□□ 0
GPC3-202ENST00000394299 MFN1Q8IWA4 741 aa15.06■□□□□ 0
GPC3-202ENST00000394299 GPR150Q8NGU9 434 aa15.06■□□□□ 0
GPC3-202ENST00000394299 GABPB2Q8TAK5 448 aaPredicted RBP15.06■□□□□ 0
GPC3-202ENST00000394299 FAM45AQ8TCE6 357 aa15.06■□□□□ 0
GPC3-202ENST00000394299 LENG8Q96PV6 779 aaPredicted RBP15.06■□□□□ 0
GPC3-202ENST00000394299 SLC30A3Q99726 388 aa15.06■□□□□ 0
GPC3-202ENST00000394299 LRRC3Q9BY71 257 aa15.06■□□□□ 0
GPC3-202ENST00000394299 IKZF3Q9UKT9 509 aa15.06■□□□□ 0
GPC3-202ENST00000394299 A8MX80 341 aa15.06■□□□□ 0
GPC3-202ENST00000394299 CCL16O15467 120 aa15.06■□□□□ 0
GPC3-202ENST00000394299 KRT36O76013 467 aa15.06■□□□□ 0
GPC3-202ENST00000394299 TPBGLP0DKB5 382 aa15.06■□□□□ 0
GPC3-202ENST00000394299 CD1DP15813 335 aa15.06■□□□□ 0
GPC3-202ENST00000394299 SP100P23497 879 aaPredicted RBP15.06■□□□□ 0
GPC3-202ENST00000394299 CDC25CP30307 473 aa15.06■□□□□ 0
GPC3-202ENST00000394299 CCR2P41597 374 aa15.06■□□□□ 0
GPC3-202ENST00000394299 PRKAA2P54646 552 aa15.06■□□□□ 0
GPC3-202ENST00000394299 CDH13P55290 713 aa15.06■□□□□ 0
GPC3-202ENST00000394299 ERVFC1P60507 584 aa15.06■□□□□ 0
GPC3-202ENST00000394299 SEMG2Q02383 582 aa15.06■□□□□ 0
GPC3-202ENST00000394299 KLF10Q13118 480 aa15.06■□□□□ 0
GPC3-202ENST00000394299 OR4D1Q15615 310 aa15.06■□□□□ 0
GPC3-202ENST00000394299 PAQR3Q6TCH7 311 aa15.06■□□□□ 0
GPC3-202ENST00000394299 SPRED2Q7Z698 418 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms