RNA–Protein interactions for RNA: ENST00000393588.8

CASP3-203, Transcript of caspase 3, humanhuman

TSL 4 BASIC

Gene CASP3, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-203ENST00000393588 RAD23BP54727 409 aa4.26□□□□□ -1.73
CASP3-203ENST00000393588 VEPH1Q14D04 833 aa4.26□□□□□ -1.73
CASP3-203ENST00000393588 TAF11Q15544 211 aa4.26□□□□□ -1.73
CASP3-203ENST00000393588 CTF1Q16619 201 aa4.26□□□□□ -1.73
CASP3-203ENST00000393588 KCNT1Q5JUK3 1230 aa4.26□□□□□ -1.73
CASP3-203ENST00000393588 FBXO46Q6PJ61 603 aaPredicted RBP4.26□□□□□ -1.73
CASP3-203ENST00000393588 GFRALQ6UXV0 394 aa4.26□□□□□ -1.73
CASP3-203ENST00000393588 DHX40Q8IX18 779 aaKnown RBP4.26□□□□□ -1.73
CASP3-203ENST00000393588 ODF3L1Q8IXM7 274 aa4.26□□□□□ -1.73
CASP3-203ENST00000393588 METTL27Q8N6F8 245 aaPredicted RBP4.26□□□□□ -1.73
CASP3-203ENST00000393588 BEST2Q8NFU1 509 aa4.26□□□□□ -1.73
CASP3-203ENST00000393588 DMBX1Q8NFW5 382 aa4.26□□□□□ -1.73
CASP3-203ENST00000393588 HERVK_113Q902F9 699 aa4.26□□□□□ -1.73
CASP3-203ENST00000393588 PLEKHA5Q9HAU0 1116 aa4.26□□□□□ -1.73
CASP3-203ENST00000393588 MKKSQ9NPJ1 570 aaPredicted RBP4.26□□□□□ -1.73
CASP3-203ENST00000393588 RCOR1Q9UKL0 485 aa4.26□□□□□ -1.73
CASP3-203ENST00000393588 LSM4Q9Y4Z0 139 aaKnown RBP4.26□□□□□ -1.73
CASP3-203ENST00000393588 STON1Q9Y6Q2 735 aa4.26□□□□□ -1.73
CASP3-203ENST00000393588 GOLGA6L10A0A0M3HER8 536 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 LILRA5A6NI73 299 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 TEX22C9J3V5 150 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 CAPN9O14815 690 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 BCAT2O15382 392 aaPredicted RBP4.25□□□□□ -1.73
CASP3-203ENST00000393588 EDIL3O43854 480 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 ZG16O60844 167 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 TACC1O75410 805 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 HEXAP06865 529 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 CD53P19397 219 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 USP8P40818 1118 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 CLCNKAP51800 687 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 EFNB1P98172 346 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 KRT24Q2M2I5 525 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 EIF2S3LQ2VIR3 472 aaKnown RBP4.25□□□□□ -1.73
CASP3-203ENST00000393588 ZNF766Q5HY98 468 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 LCE1FQ5T754 118 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 SLC22A25Q6T423 547 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 SLC36A4Q6YBV0 504 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 TAOK1Q7L7X3 1001 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 LINGO2Q7L985 606 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 NFE4Q86UQ8 179 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 TMEM219Q86XT9 240 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 TMTC1Q8IUR5 882 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 SLC35F3Q8IY50 421 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.25□□□□□ -1.73
CASP3-203ENST00000393588 WDSUB1Q8N9V3 476 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 C11orf65Q8NCR3 313 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 NOC3LQ8WTT2 800 aaKnown RBP4.25□□□□□ -1.73
CASP3-203ENST00000393588 CDCA5Q96FF9 252 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 ISCA1Q9BUE6 129 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 PPCSQ9HAB8 311 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 SCRT2Q9NQ03 307 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 TMEM30AQ9NV96 361 aa4.25□□□□□ -1.73
CASP3-203ENST00000393588 PDS5AQ29RF7 1337 aaKnown RBP4.24□□□□□ -1.73
CASP3-203ENST00000393588 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 GOLGA6L9A6NEM1 432 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 AMBPP02760 352 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 GALTP07902 379 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 S1PR1P21453 382 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 POU1F1P28069 291 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 FMO5P49326 533 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 VEGFCP49767 419 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 PITX1P78337 314 aaPredicted RBP4.24□□□□□ -1.73
CASP3-203ENST00000393588 UBE3AQ05086 875 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 NFIL3Q16649 462 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 TCTN1Q2MV58 587 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 C2orf68Q2NKX9 166 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 PLEKHA7Q6IQ23 1121 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 TRNP1Q6NT89 227 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 RGMBQ6NW40 437 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 CPLX2Q6PUV4 134 aaKnown RBP4.24□□□□□ -1.73
CASP3-203ENST00000393588 TDRPQ86YL5 185 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 EPHX4Q8IUS5 362 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 WDR63Q8IWG1 891 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 BBS10Q8TAM1 723 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 SLC20A1Q8WUM9 679 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 ABTB1Q969K4 478 aaPredicted RBP4.24□□□□□ -1.73
CASP3-203ENST00000393588 ZSCAN31Q96LW9 406 aaPredicted RBP4.24□□□□□ -1.73
CASP3-203ENST00000393588 BBS4Q96RK4 519 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 GLIS2Q9BZE0 524 aaPredicted RBP4.24□□□□□ -1.73
CASP3-203ENST00000393588 MAGEE1Q9HCI5 957 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 TMEM160Q9NX00 188 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 TAAR2Q9P1P5 351 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 RALYQ9UKM9 306 aaKnown RBP4.24□□□□□ -1.73
CASP3-203ENST00000393588 AMDHD2Q9Y303 409 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 FAM96BQ9Y3D0 163 aa4.24□□□□□ -1.73
CASP3-203ENST00000393588 EIF3FO00303 357 aaPredicted RBP4.23□□□□□ -1.73
CASP3-203ENST00000393588 MT-CYBP00156 380 aaPredicted RBP4.23□□□□□ -1.73
CASP3-203ENST00000393588 HMGB1P09429 215 aaKnown RBP4.23□□□□□ -1.73
CASP3-203ENST00000393588 DDX5P17844 614 aaKnown RBP4.23□□□□□ -1.73
CASP3-203ENST00000393588 MAOAP21397 527 aa4.23□□□□□ -1.73
CASP3-203ENST00000393588 RRM1P23921 792 aa4.23□□□□□ -1.73
CASP3-203ENST00000393588 SHMT1P34896 483 aa4.23□□□□□ -1.73
CASP3-203ENST00000393588 DDIT3P35638 169 aa4.23□□□□□ -1.73
CASP3-203ENST00000393588 ATP12AP54707 1039 aa4.23□□□□□ -1.73
CASP3-203ENST00000393588 KRTAP10-12P60413 245 aa4.23□□□□□ -1.73
CASP3-203ENST00000393588 PPFIA1Q13136 1202 aa4.23□□□□□ -1.73
CASP3-203ENST00000393588 HIST2H2ACQ16777 129 aaPredicted RBP4.23□□□□□ -1.73
CASP3-203ENST00000393588 TMEM81Q6P7N7 255 aa4.23□□□□□ -1.73
CASP3-203ENST00000393588 KMT5CQ86Y97 462 aa4.23□□□□□ -1.73
CASP3-203ENST00000393588 ZCCHC9Q8N567 271 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms