RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 ZNF23P17027 643 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 CD53P19397 219 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 CD72P21854 359 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 BDKRB2P30411 391 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 GRK6P43250 576 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 FUT6P51993 359 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 MLLT10P55197 1068 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 ARL4CP56559 192 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 TUBB4BP68371 445 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 CSNK2A1P68400 391 aaPredicted RBP1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 RELQ04864 619 aaPredicted RBP1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 CHRNDQ07001 517 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 FOXM1Q08050 763 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 ILF3Q12906 894 aaKnown RBP eCLIP1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 PPIGQ13427 754 aaKnown RBP eCLIP1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 EFR3AQ14156 821 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 MYLK3Q32MK0 819 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 TMEM30BQ3MIR4 351 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 MMEL1Q495T6 779 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 ZNF876PQ49A33 203 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 FBXO43Q4G163 708 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 SLC45A4Q5BKX6 768 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 JMJD6Q6NYC1 403 aaPredicted RBP1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 ARHGAP11AQ6P4F7 1023 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 SLC27A1Q6PCB7 646 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 CCDC174Q6PII3 467 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 B3GNT6Q6ZMB0 384 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 PLEKHM3Q6ZWE6 761 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 LRRC8DQ7L1W4 858 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 DGLUCYQ7Z3D6 616 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 CACNA2D4Q7Z3S7 1137 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 SMIM29Q86T20 159 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 GPR180Q86V85 440 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 TMTC1Q8IUR5 882 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 LYG1Q8N1E2 194 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 MYCT1Q8N699 235 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 NEXN-AS1Q8NBZ9 246 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 CSNK2A3Q8NEV1 391 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 PPP4R1Q8TF05 950 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 SNAPC3Q92966 411 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 SCRN2Q96FV2 425 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 ZNF354BQ96LW1 612 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 ZSCAN31Q96LW9 406 aaPredicted RBP1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 MPHOSPH6Q99547 160 aaKnown RBP1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 MTERF1Q99551 399 aaKnown RBP1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 EIF2AK1Q9BQI3 630 aaKnown RBP1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 PYM1Q9BRP8 204 aaKnown RBP1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 POLR3CQ9BUI4 534 aaPredicted RBP1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 IFIH1Q9BYX4 1025 aaKnown RBP1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 UBXN6Q9BZV1 441 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 EGLN1Q9GZT9 426 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 INTS2Q9H0H0 1204 aaKnown RBP1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 MAGEE1Q9HCI5 957 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 PTPRHQ9HD43 1115 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 GPR108Q9NPR9 543 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 SNTG1Q9NSN8 517 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 INTS10Q9NVR2 710 aaKnown RBP1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 DDX43Q9NXZ2 648 aaKnown RBP1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 HCN3Q9P1Z3 774 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 PEMTQ9UBM1 199 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 POLG2Q9UHN1 485 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 FBXO9Q9UK97 447 aaPredicted RBP1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 DNAJC16Q9Y2G8 782 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 NFE2L3Q9Y4A8 694 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 UTYO14607 1347 aa1.3□□□□□ -2.2
SNORD28B-201ENST00000390993 TEX13CA0A0J9YWL9 993 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 VWA3AA6NCI4 1184 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 PABPN1LA6NDY0 278 aaKnown RBP1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 TMEM202A6NGA9 273 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 GAGE10A6NGK3 116 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 LRRC53A6NM62 1247 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 C15orf62A8K5M9 175 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 TEX22C9J3V5 150 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 PSMD14O00487 310 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 SH2B2O14492 632 aaPredicted RBP1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 BUD23O43709 281 aaKnown RBP1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 SYNGR3O43761 229 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 TBX6O95947 436 aaPredicted RBP1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 PAK4O96013 591 aaPredicted RBP1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 TFP02787 698 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 HOXB5P09067 269 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 CNPP09543 421 aaKnown RBP1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 ZNF883P0CG24 379 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 PAX1P15863 534 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 S1PR1P21453 382 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 NR2F2P24468 414 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 MARK3P27448 753 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 SERPINB3P29508 390 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 ALDH4A1P30038 563 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 CHRNB4P30926 498 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 HOXA13P31271 388 aaPredicted RBP1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 PSMC2P35998 433 aaKnown RBP1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 METAP2P50579 478 aaKnown RBP eCLIP1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 CDH15P55291 814 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 HNRNPH2P55795 449 aaKnown RBP1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 KCNJ10P78508 379 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 EFNB1P98172 346 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 SORDQ00796 357 aa1.29□□□□□ -2.2
SNORD28B-201ENST00000390993 PLIN5Q00G26 463 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms