RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 ZBED3Q96IU2 234 aaPredicted RBP3.46□□□□□ -1.86
TRAV39-201ENST00000390466 CPB2Q96IY4 423 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 MAGED4Q96JG8 741 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 PRMT6Q96LA8 375 aaPredicted RBP3.46□□□□□ -1.86
TRAV39-201ENST00000390466 PPP1R36Q96LQ0 422 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 C3orf30Q96M34 536 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 YME1L1Q96TA2 773 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 GMLQ99445 158 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 LGMNQ99538 433 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 ADPGKQ9BRR6 497 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 KIFC1Q9BW19 673 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 FUNDC2Q9BWH2 189 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 EMILIN2Q9BXX0 1053 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 CEP41Q9BYV8 373 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 AMBRA1Q9C0C7 1298 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 WDR12Q9GZL7 423 aaKnown RBP3.46□□□□□ -1.86
TRAV39-201ENST00000390466 NXF2Q9GZY0 626 aaKnown RBP3.46□□□□□ -1.86
TRAV39-201ENST00000390466 CDT1Q9H211 546 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 TP63Q9H3D4 680 aaPredicted RBP3.46□□□□□ -1.86
TRAV39-201ENST00000390466 TRIT1Q9H3H1 467 aaKnown RBP3.46□□□□□ -1.86
TRAV39-201ENST00000390466 MUC13Q9H3R2 512 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 SMOC2Q9H3U7 446 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 DHX35Q9H5Z1 703 aaKnown RBP3.46□□□□□ -1.86
TRAV39-201ENST00000390466 FAM124BQ9H5Z6 455 aaPredicted RBP3.46□□□□□ -1.86
TRAV39-201ENST00000390466 RMND5AQ9H871 391 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 SP140LQ9H930 580 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 LRRC40Q9H9A6 602 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 CYP3A43Q9HB55 503 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 FANCEQ9HB96 536 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 LRRC4Q9HBW1 653 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 MAGEE1Q9HCI5 957 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 MRPL40Q9NQ50 206 aaKnown RBP3.46□□□□□ -1.86
TRAV39-201ENST00000390466 C20orf96Q9NUD7 363 aaPredicted RBP3.46□□□□□ -1.86
TRAV39-201ENST00000390466 TBC1D13Q9NVG8 400 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.46□□□□□ -1.86
TRAV39-201ENST00000390466 QPCTLQ9NXS2 382 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 USE1Q9NZ43 259 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 ADA2Q9NZK5 511 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 GMIPQ9P107 970 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 RCOR3Q9P2K3 495 aaPredicted RBP3.46□□□□□ -1.86
TRAV39-201ENST00000390466 XPR1Q9UBH6 696 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 MTRRQ9UBK8 725 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 SEPT3Q9UH03 358 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 SEPT9Q9UHD8 586 aaPredicted RBP3.46□□□□□ -1.86
TRAV39-201ENST00000390466 SLCO3A1Q9UIG8 710 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 DAPK2Q9UIK4 370 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 OSGIN1Q9UJX0 560 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 SERPINA10Q9UK55 444 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 CCNL1Q9UK58 526 aaPredicted RBP3.46□□□□□ -1.86
TRAV39-201ENST00000390466 AGO1Q9UL18 857 aaKnown RBP3.46□□□□□ -1.86
TRAV39-201ENST00000390466 USP22Q9UPT9 525 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 NEU3Q9UQ49 428 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 EIF3LQ9Y262 564 aaKnown RBP3.46□□□□□ -1.86
TRAV39-201ENST00000390466 RBMX2Q9Y388 322 aaKnown RBP3.46□□□□□ -1.86
TRAV39-201ENST00000390466 MTF2Q9Y483 593 aaPredicted RBP3.46□□□□□ -1.86
TRAV39-201ENST00000390466 TESMINQ9Y4I5 508 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 ST14Q9Y5Y6 855 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 FRMPD3Q5JV73 1810 aa3.46□□□□□ -1.86
TRAV39-201ENST00000390466 TP53BP1Q12888 1972 aaPredicted RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 C1orf232A0A0U1RR37 186 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 ISPDA4D126 451 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 PABPN1LA6NDY0 278 aaKnown RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 SOWAHBA6NEL2 793 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 LRRIQ4A6NIV6 560 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 METTL15A6NJ78 407 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 TRPC5OSA6NMA1 111 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 YDJCA8MPS7 323 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 F5H423 210 aaPredicted RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 M0QX08 132 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 ERVH48-1M5A8F1 160 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 SLC1A7O00341 560 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 ARHGAP33O14559 1287 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 AURKAO14965 403 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 MED7O43513 233 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 TIMM44O43615 452 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 XYLBO75191 536 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 MAFO75444 373 aaPredicted RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 USP2O75604 605 aaPredicted RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 GRAP2O75791 330 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 UPK1BO75841 260 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 DNAJB5O75953 348 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 DDHD2O94830 711 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 MYO1DO94832 1006 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 SUPT7LO94864 414 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 INMTO95050 263 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 GOT2P00505 430 aaKnown RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 HPRP00739 348 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 NTRK1P04629 796 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 NR3C2P08235 984 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 CHRNB1P11230 501 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 FCGR1AP12314 374 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 GOT1P17174 413 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 NAT1P18440 290 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 NR4A1P22736 598 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 ATP5F1P24539 256 aaPredicted RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 FASP25445 335 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 PTPN3P26045 913 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 YWHAQP27348 245 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 MAP4P27816 1152 aaKnown RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 MZF1P28698 734 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms