RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 UBE2R2Q712K3 238 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 FAM35AQ86V20 835 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 PHACTR4Q8IZ21 702 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 FAM109AQ8N4B1 249 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 TFB1MQ8WVM0 346 aaKnown RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 DNAJB3Q8WWF6 145 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 FEM1CQ96JP0 617 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 ERGIC3Q9Y282 383 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 MIA3Q5JRA6 1907 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 NUAK1O60285 661 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 NTSR2O95665 410 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 CXCR5P32302 372 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 CDH17Q12864 832 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 UGT3A2Q3SY77 523 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 COLEC12Q5KU26 742 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 SLC35F1Q5T1Q4 408 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 IL31Q6EBC2 164 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 ZCCHC8Q6NZY4 707 aaKnown RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 PKN3Q6P5Z2 889 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 CREB3L2Q70SY1 520 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 GALNT7Q86SF2 657 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 ZNF605Q86T29 641 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 FIBCD1Q8N539 461 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 PPM1NQ8N819 430 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 UHMK1Q8TAS1 419 aaKnown RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 TBC1D15Q8TC07 691 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 PPP1R14AQ96A00 147 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 TEFMQ96QE5 360 aaKnown RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 CPVLQ9H3G5 476 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 NIPAL2Q9H841 368 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 MTMR10Q9NXD2 777 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 FIS1Q9Y3D6 152 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 PCDHA11Q9Y5I1 949 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 V9GYQ6 96 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 PGK2P07205 417 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 ERVK-10P10266 1014 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 GYS1P13807 737 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 DCKP27707 260 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 RPL4P36578 427 aaKnown RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 TWF1Q12792 350 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 MAB21L1Q13394 359 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 TEAD4Q15561 434 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 TBCELQ5QJ74 424 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 IDO2Q6ZQW0 420 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 FBXO16Q8IX29 292 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 ANKRD53Q8N9V6 530 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 ETNPPLQ8TBG4 499 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 C11orf70Q9BRQ4 267 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 SLITRK2Q9H156 845 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 DHX35Q9H5Z1 703 aaKnown RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 MARCH7Q9H992 704 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 SETD4Q9NVD3 440 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 TAS2R13Q9NYV9 303 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 SLC30A4O14863 429 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 MYL12BO14950 172 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 GNAZP19086 355 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 KLRC1P26715 233 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 CLCN5P51795 746 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ZNF543Q08ER8 600 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 SGCGQ13326 291 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 TIGD3Q6B0B8 471 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 GPALPP1Q8IXQ4 340 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 CENPLQ8N0S6 344 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 FBXO25Q8TCJ0 367 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 RIT1Q92963 219 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 TCEAL4Q96EI5 215 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 SCGB3A2Q96PL1 93 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 OXCT2Q9BYC2 517 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 C3orf14Q9HBI5 128 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 CLN6Q9NWW5 311 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 TMEM161AQ9NX61 479 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 MARK1Q9P0L2 795 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 DNAJC16Q9Y2G8 782 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 NUMBLQ9Y6R0 609 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ZDBF2Q9HCK1 2354 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 A0A0G2JPF8 293 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 TRIM43BA6NCK2 446 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 HNRNPCL3B7ZW38 293 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 PMPCBO75439 489 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ERN1O75460 977 aaKnown RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 RPLP0P05388 317 aaKnown RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 HNRNPCL4P0DMR1 293 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 STOMP27105 288 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 STARP49675 285 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ARFIP1P53367 373 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 OCLNQ16625 522 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ANKS6Q68DC2 871 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 EFCAB12Q6NXP0 572 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 KLHDC10Q6PID8 442 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 SCUBE3Q8IX30 993 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 CPNE9Q8IYJ1 553 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 SLC44A1Q8WWI5 657 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 AKT1S1Q96B36 256 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 CCDC3Q9BQI4 270 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ADI1Q9BV57 179 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 VTA1Q9NP79 307 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 MTMR4Q9NYA4 1195 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 GTSE1Q9NYZ3 720 aa4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ZNF646O15015 1829 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-203ENST00000381196 ANGPTL1O95841 491 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms