RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 EGFL7Q9UHF1 273 aa16.3■□□□□ 0.2
NKX3-1-201ENST00000380871 A0A0J9YVX5 310 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 TMEM88BA6NKF7 163 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 ADRA1AP35348 466 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 EMP3P54852 163 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 SREBF2Q12772 1141 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 ABCC13Q9NSE7 274 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 AURKCQ9UQB9 309 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 TCRBV3S1A0A5B6 114 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 ARHGAP10A1A4S6 786 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 CNTN5O94779 1100 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 CLIC3O95833 236 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 SLC4A1P02730 911 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 PFKPQ01813 784 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 FIBCD1Q8N539 461 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 GIPC2Q8TF65 315 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 DDI1Q8WTU0 396 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 FCRL5Q96RD9 977 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 GSTO2Q9H4Y5 243 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 RSL24D1Q9UHA3 163 aaKnown RBP16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 DSEQ9UL01 958 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 H3BNH8 94 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 J3KR12 359 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 NRP2O60462 931 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 ZNF623O75123 536 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 SUPT7LO94864 414 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 ZNF23P17027 643 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 CDKN2DP55273 166 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 SH3BGRP55822 239 aaPredicted RBP16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 DNAJB13P59910 316 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 CAPRIN1Q14444 709 aaKnown RBP16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 CTXN3Q4LDR2 81 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 FBXO48Q5FWF7 155 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 GPR158Q5T848 1215 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 ZBTB49Q6ZSB9 765 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 LPCAT2Q7L5N7 544 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 IPO11Q9UI26 975 aaKnown RBP16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 TRAF6Q9Y4K3 522 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 HS3ST4Q9Y661 456 aa16.29■□□□□ 0.2
NKX3-1-201ENST00000380871 ZNF236Q9UL36 1845 aa16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 A0A087X1B8 175 aa16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 E9PAM4 449 aa16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 NR5A2O00482 541 aa16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 STT3AP46977 705 aa16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 PSMD8P48556 350 aa16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 CLLU1OSQ5K130 101 aa16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 RAP1GAP2Q684P5 730 aa16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 ABI1Q8IZP0 508 aa16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 SUSD3Q96L08 255 aa16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 OSBPL11Q9BXB4 747 aa16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 TMEM181Q9P2C4 612 aa16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 CROTQ9UKG9 612 aa16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 CNOT11Q9UKZ1 510 aaKnown RBP16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 FOXD2O60548 495 aaPredicted RBP16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 ANXA9O76027 345 aa16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 SEC24DO94855 1032 aaPredicted RBP16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 PIRTP0C851 137 aa16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 SLC7A1P30825 629 aa16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 CTBSQ01459 385 aa16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 PLOD1Q02809 727 aaPredicted RBP16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 PRKCQQ04759 706 aa16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 RIN3Q8TB24 985 aa16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 RMND5BQ96G75 393 aaPredicted RBP16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 GLT1D1Q96MS3 346 aa16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 TSGA13Q96PP4 275 aa16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 IL12RB2Q99665 862 aa16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 RRN3Q9NYV6 651 aa16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 FNDC3AQ9Y2H6 1198 aaKnown RBP16.28■□□□□ 0.2
NKX3-1-201ENST00000380871 GJB3O75712 270 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 SRP72O76094 671 aaKnown RBP16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 SIX3O95343 332 aaPredicted RBP16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 CKBP12277 381 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 CCNCP24863 283 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 ACLYP53396 1101 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 FOXA1P55317 472 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 POU4F1Q01851 419 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 DSC3Q14574 896 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 IHHQ14623 411 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 ALFQ53S48 1182 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 C10orf120Q5SQS8 335 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 DHFR2Q86XF0 187 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 RYBPQ8N488 228 aaPredicted RBP16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 OR52K2Q8NGK3 314 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 ABTB1Q969K4 478 aaPredicted RBP16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 HSPBAP1Q96EW2 488 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 RANBP9Q96S59 729 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 MARCH4Q9P2E8 410 aaPredicted RBP16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 SARDHQ9UL12 918 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 MYRFQ9Y2G1 1151 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 CRYL1Q9Y2S2 319 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 NYNRINQ9P2P1 1898 aaKnown RBP16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 NME4O00746 187 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 PFDN1O60925 122 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 ARSDP51689 593 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 WNT3AP56704 352 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 VPS26BQ4G0F5 336 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 NHSL2Q5HYW2 709 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 RANBP10Q6VN20 620 aa16.27■□□□□ 0.2
NKX3-1-201ENST00000380871 SPPL2CQ8IUH8 684 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms