RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 SCYL1Q96KG9 808 aa14.31□□□□□ -0.12
CLCN4-201ENST00000380829 WWP1Q9H0M0 922 aa14.31□□□□□ -0.12
CLCN4-201ENST00000380829 ZNF334Q9HCZ1 680 aaPredicted RBP14.31□□□□□ -0.12
CLCN4-201ENST00000380829 UBA2Q9UBT2 640 aaPredicted RBP14.31□□□□□ -0.12
CLCN4-201ENST00000380829 ADAMTS6Q9UKP5 1117 aa14.31□□□□□ -0.12
CLCN4-201ENST00000380829 PCDHGB4Q9UN71 923 aa14.31□□□□□ -0.12
CLCN4-201ENST00000380829 PLA2G4CQ9UP65 541 aa14.31□□□□□ -0.12
CLCN4-201ENST00000380829 RUVBL2Q9Y230 463 aaKnown RBP14.31□□□□□ -0.12
CLCN4-201ENST00000380829 ZNF711Q9Y462 761 aa14.31□□□□□ -0.12
CLCN4-201ENST00000380829 PCDHGB5Q9Y5G0 923 aa14.31□□□□□ -0.12
CLCN4-201ENST00000380829 INSL5Q9Y5Q6 135 aa14.31□□□□□ -0.12
CLCN4-201ENST00000380829 ARL5AQ9Y689 179 aa14.31□□□□□ -0.12
CLCN4-201ENST00000380829 C15orf38-AP3S2A0A0A6YYH1 394 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.3□□□□□ -0.12
CLCN4-201ENST00000380829 MYOCOSA0A1B0GUC4 107 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 MROH6A6NGR9 719 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 CBX4O00257 560 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 TEX28O15482 410 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 LDB2O43679 373 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 MAGEC1O60732 1142 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 SORBS2O94875 1100 aaKnown RBP14.3□□□□□ -0.12
CLCN4-201ENST00000380829 STMN1P16949 149 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 GRK2P25098 689 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 TAS2R39P59534 338 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 ABCE1P61221 599 aaKnown RBP14.3□□□□□ -0.12
CLCN4-201ENST00000380829 TBL3Q12788 808 aaKnown RBP14.3□□□□□ -0.12
CLCN4-201ENST00000380829 ZNF177Q13360 481 aaPredicted RBP14.3□□□□□ -0.12
CLCN4-201ENST00000380829 MMEL1Q495T6 779 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 PAOXQ6QHF9 649 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 TRIM67Q6ZTA4 783 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 OTOP2Q7RTS6 562 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 ARPINQ7Z6K5 226 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 DHDDSQ86SQ9 333 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.3□□□□□ -0.12
CLCN4-201ENST00000380829 PPP4R1Q8TF05 950 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 SLC35B4Q969S0 331 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 HDAC10Q969S8 669 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 DGCR14Q96DF8 476 aaKnown RBP14.3□□□□□ -0.12
CLCN4-201ENST00000380829 NSMCE3Q96MG7 304 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 RILPQ96NA2 401 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 TSNARE1Q96NA8 513 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 YME1L1Q96TA2 773 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 CINPQ9BW66 212 aaPredicted RBP14.3□□□□□ -0.12
CLCN4-201ENST00000380829 ACE2Q9BYF1 805 aaPredicted RBP14.3□□□□□ -0.12
CLCN4-201ENST00000380829 GRIP2Q9C0E4 1043 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 INIPQ9NRY2 104 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 ANKRD6Q9Y2G4 727 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 LTBP2Q14767 1821 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 TM7SF2O76062 418 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 CSPG5O95196 566 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 SERPINF2P08697 491 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 SBK3P0C264 359 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 VCLP18206 1134 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 PRAMEP78395 509 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 BTKQ06187 659 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 NADK2Q4G0N4 442 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 C6orf163Q5TEZ5 329 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 TXNDC8Q6A555 127 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 TMPRSS6Q8IU80 811 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 WDR75Q8IWA0 830 aaKnown RBP14.3□□□□□ -0.12
CLCN4-201ENST00000380829 BHMTQ93088 406 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 ZNF599Q96NL3 588 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 MGME1Q9BQP7 344 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 MRPL17Q9NRX2 175 aaKnown RBP14.3□□□□□ -0.12
CLCN4-201ENST00000380829 ACOT9Q9Y305 439 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 SH3GLB1Q9Y371 365 aa14.3□□□□□ -0.12
CLCN4-201ENST00000380829 CHD5Q8TDI0 1954 aa14.29□□□□□ -0.12
CLCN4-201ENST00000380829 A0A1B0GVM2 712 aa14.29□□□□□ -0.12
CLCN4-201ENST00000380829 TCAF2A6NFQ2 919 aa14.29□□□□□ -0.12
CLCN4-201ENST00000380829 KDELR3O43731 214 aa14.29□□□□□ -0.12
CLCN4-201ENST00000380829 TIMP1P01033 207 aa14.29□□□□□ -0.12
CLCN4-201ENST00000380829 ATP6V1B1P15313 513 aa14.29□□□□□ -0.12
CLCN4-201ENST00000380829 EPHB3P54753 998 aa14.29□□□□□ -0.12
CLCN4-201ENST00000380829 ALDH18A1P54886 795 aaKnown RBP14.29□□□□□ -0.12
CLCN4-201ENST00000380829 SMAD3P84022 425 aaKnown RBP14.29□□□□□ -0.12
CLCN4-201ENST00000380829 ASPHQ12797 758 aa14.29□□□□□ -0.12
CLCN4-201ENST00000380829 RNF219Q5W0B1 726 aaPredicted RBP14.29□□□□□ -0.12
CLCN4-201ENST00000380829 UGT2A3Q6UWM9 527 aa14.29□□□□□ -0.12
CLCN4-201ENST00000380829 CMTR2Q8IYT2 770 aaKnown RBP14.29□□□□□ -0.12
CLCN4-201ENST00000380829 BBS5Q8N3I7 341 aa14.29□□□□□ -0.12
CLCN4-201ENST00000380829 FSTL5Q8N475 847 aaPredicted RBP14.29□□□□□ -0.12
CLCN4-201ENST00000380829 TMEM151AQ8N4L1 468 aa14.29□□□□□ -0.12
CLCN4-201ENST00000380829 ARL14EPQ8N8R7 260 aaPredicted RBP14.29□□□□□ -0.12
CLCN4-201ENST00000380829 HIPK4Q8NE63 616 aa14.29□□□□□ -0.12
CLCN4-201ENST00000380829 NXNL1Q96CM4 212 aa14.29□□□□□ -0.12
CLCN4-201ENST00000380829 FEM1CQ96JP0 617 aa14.29□□□□□ -0.12
CLCN4-201ENST00000380829 ZFRQ96KR1 1074 aaKnown RBP14.29□□□□□ -0.12
CLCN4-201ENST00000380829 OMDQ99983 421 aa14.29□□□□□ -0.12
CLCN4-201ENST00000380829 MUC3BQ9H195 1237 aa14.29□□□□□ -0.12
CLCN4-201ENST00000380829 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.29□□□□□ -0.12
CLCN4-201ENST00000380829 MARCH4Q9P2E8 410 aaPredicted RBP14.29□□□□□ -0.12
CLCN4-201ENST00000380829 SEPT3Q9UH03 358 aa14.29□□□□□ -0.12
CLCN4-201ENST00000380829 PAIP2BQ9ULR5 123 aaKnown RBP14.29□□□□□ -0.12
CLCN4-201ENST00000380829 ILVBLA1L0T0 632 aa14.29□□□□□ -0.12
CLCN4-201ENST00000380829 TRIM13O60858 407 aa14.29□□□□□ -0.12
CLCN4-201ENST00000380829 RAG1P15918 1043 aa14.29□□□□□ -0.12
CLCN4-201ENST00000380829 CHN2P52757 468 aa14.29□□□□□ -0.12
CLCN4-201ENST00000380829 ZXDBP98169 803 aa14.29□□□□□ -0.12
CLCN4-201ENST00000380829 CXorf57Q6NSI4 855 aaKnown RBP14.29□□□□□ -0.12
CLCN4-201ENST00000380829 LRRC8EQ6NSJ5 796 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms