RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 TRAPPC9Q96Q05 1148 aa20.07■□□□□ 0.8
EBF1-202ENST00000380654 GIMAP2Q9UG22 337 aa20.07■□□□□ 0.8
EBF1-202ENST00000380654 AK5Q9Y6K8 562 aa20.07■□□□□ 0.8
EBF1-202ENST00000380654 SQORQ9Y6N5 450 aa20.07■□□□□ 0.8
EBF1-202ENST00000380654 MTMR11A4FU01 709 aa20.06■□□□□ 0.8
EBF1-202ENST00000380654 NT5C1B-RDH14C9J2C7 533 aa20.06■□□□□ 0.8
EBF1-202ENST00000380654 H3BMM5 538 aa20.06■□□□□ 0.8
EBF1-202ENST00000380654 UBXN8O00124 270 aa20.06■□□□□ 0.8
EBF1-202ENST00000380654 SYN3O14994 580 aa20.06■□□□□ 0.8
EBF1-202ENST00000380654 INHBCP55103 352 aa20.06■□□□□ 0.8
EBF1-202ENST00000380654 SH3BP2P78314 561 aa20.06■□□□□ 0.8
EBF1-202ENST00000380654 FAM189BP81408 668 aa20.06■□□□□ 0.8
EBF1-202ENST00000380654 ACVR1Q04771 509 aa20.06■□□□□ 0.8
EBF1-202ENST00000380654 ZFP1Q6P2D0 407 aa20.06■□□□□ 0.8
EBF1-202ENST00000380654 LGI2Q8N0V4 545 aa20.06■□□□□ 0.8
EBF1-202ENST00000380654 ZNF483Q8TF39 744 aaPredicted RBP20.06■□□□□ 0.8
EBF1-202ENST00000380654 L3HYPDHQ96EM0 354 aa20.06■□□□□ 0.8
EBF1-202ENST00000380654 SMIM14Q96QK8 99 aa20.06■□□□□ 0.8
EBF1-202ENST00000380654 THSD7BQ9C0I4 1608 aa20.06■□□□□ 0.8
EBF1-202ENST00000380654 PRSS51A0A1B0GVH4 220 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 TRIM38O00635 465 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 TLR5O60602 858 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 TACR2P21452 398 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 SLC6A4P31645 630 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 HERVK_113P63132 956 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 GALNT1Q10472 559 aaPredicted RBP20.05■□□□□ 0.8
EBF1-202ENST00000380654 SREBF2Q12772 1141 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 DUSP4Q13115 394 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 MRPL58Q14197 206 aaKnown RBP20.05■□□□□ 0.8
EBF1-202ENST00000380654 FBXO48Q5FWF7 155 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 RARS2Q5T160 578 aaKnown RBP20.05■□□□□ 0.8
EBF1-202ENST00000380654 UGT2A3Q6UWM9 527 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 LARP4Q71RC2 724 aaKnown RBP eCLIP20.05■□□□□ 0.8
EBF1-202ENST00000380654 PTGR2Q8N8N7 351 aaPredicted RBP20.05■□□□□ 0.8
EBF1-202ENST00000380654 OR7D4Q8NG98 312 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 ATP6V1E2Q96A05 226 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 EXOC2Q96KP1 924 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 NSUN5Q96P11 429 aaKnown RBP20.05■□□□□ 0.8
EBF1-202ENST00000380654 BTBD9Q96Q07 612 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 SLC39A3Q9BRY0 314 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 ERVK-6Q9BXR3 956 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 PDFQ9HBH1 243 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 OLA1Q9NTK5 396 aaKnown RBP20.05■□□□□ 0.8
EBF1-202ENST00000380654 DNAJA2O60884 412 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 RNASEH2AO75792 299 aaKnown RBP20.05■□□□□ 0.8
EBF1-202ENST00000380654 FESP07332 822 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 ALDOCP09972 364 aaKnown RBP20.05■□□□□ 0.8
EBF1-202ENST00000380654 FOXA1P55317 472 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 STX5Q13190 355 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 UGT3A2Q3SY77 523 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 IL23RQ5VWK5 629 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 ARMC3Q5W041 872 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 FEM1CQ96JP0 617 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 RNF186Q9NXI6 227 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 UTP6Q9NYH9 597 aaKnown RBP20.05■□□□□ 0.8
EBF1-202ENST00000380654 ANKRD12Q6UB98 2062 aa20.05■□□□□ 0.8
EBF1-202ENST00000380654 PRORSD1PA6NEY8 169 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 RPP40O75818 363 aaKnown RBP20.04■□□□□ 0.8
EBF1-202ENST00000380654 FGF1P05230 155 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 ZNF37AP17032 561 aaPredicted RBP20.04■□□□□ 0.8
EBF1-202ENST00000380654 HLA-DPA1P20036 260 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 RGRP47804 291 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 POLE2P56282 527 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 NME5P56597 212 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 GRM2Q14416 872 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 PFKFB4Q16877 469 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 TICAM1Q8IUC6 712 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 BRSK1Q8TDC3 778 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 C19orf60Q96EN9 201 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 KCNA7Q96RP8 456 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 CATSPERZQ9NTU4 200 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 SPATS2LQ9NUQ6 558 aaKnown RBP20.04■□□□□ 0.8
EBF1-202ENST00000380654 UBAP1Q9NZ09 502 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 GMPR2Q9P2T1 348 aaKnown RBP20.04■□□□□ 0.8
EBF1-202ENST00000380654 C15orf38-AP3S2A0A0A6YYH1 394 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 RTN3O95197 1032 aaPredicted RBP20.04■□□□□ 0.8
EBF1-202ENST00000380654 SNRPB2P08579 225 aaKnown RBP20.04■□□□□ 0.8
EBF1-202ENST00000380654 MTHFD2P13995 350 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 GK3PQ14409 553 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 RTP2Q5QGT7 225 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 ARPINQ7Z6K5 226 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 ST13P4Q8IZP2 240 aaPredicted RBP20.04■□□□□ 0.8
EBF1-202ENST00000380654 GALNT4Q8N4A0 578 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 OR4L1Q8NH43 312 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 ASB9Q96DX5 294 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 UNC93B1Q9H1C4 597 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 PAPOLBQ9NRJ5 636 aaKnown RBP20.04■□□□□ 0.8
EBF1-202ENST00000380654 BCAP29Q9UHQ4 241 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 SPO11Q9Y5K1 396 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 DNAJC15Q9Y5T4 150 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 CHD5Q8TDI0 1954 aa20.04■□□□□ 0.8
EBF1-202ENST00000380654 CDK14O94921 469 aa20.03■□□□□ 0.8
EBF1-202ENST00000380654 PIM1P11309 404 aaPredicted RBP20.03■□□□□ 0.8
EBF1-202ENST00000380654 HOXD9P28356 352 aaPredicted RBP20.03■□□□□ 0.8
EBF1-202ENST00000380654 PMLP29590 882 aa20.03■□□□□ 0.8
EBF1-202ENST00000380654 SLC26A3P40879 764 aa20.03■□□□□ 0.8
EBF1-202ENST00000380654 CHN2P52757 468 aa20.03■□□□□ 0.8
EBF1-202ENST00000380654 YBEYP58557 167 aaPredicted RBP20.03■□□□□ 0.8
EBF1-202ENST00000380654 TRIM25Q14258 630 aaKnown RBP20.03■□□□□ 0.8
EBF1-202ENST00000380654 MRNIPQ6NTE8 343 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms