RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 PIP5K1AQ99755 562 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 KMT5AQ9NQR1 393 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 ZC3H7BQ9UGR2 993 aaKnown RBP7.5□□□□□ -1.21
CDKL5-201ENST00000379989 PRR23AA6NEV1 266 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 SAC3D1A6NKF1 404 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 CPNE3O75131 537 aaKnown RBP7.5□□□□□ -1.21
CDKL5-201ENST00000379989 XYLBO75191 536 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 DNAJB5O75953 348 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 YBX3P16989 372 aaKnown RBP eCLIP7.5□□□□□ -1.21
CDKL5-201ENST00000379989 DDCP20711 480 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 SLC12A2P55011 1212 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 OR2B6P58173 313 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 NLRP11P59045 1033 aaKnown RBP7.5□□□□□ -1.21
CDKL5-201ENST00000379989 SNAP25P60880 206 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 GEN1Q17RS7 908 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 HABP4Q5JVS0 413 aaKnown RBP7.5□□□□□ -1.21
CDKL5-201ENST00000379989 GRTP1Q5TC63 336 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 IER5Q5VY09 327 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 NXNL2Q5VZ03 156 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 METTL7BQ6UX53 244 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.5□□□□□ -1.21
CDKL5-201ENST00000379989 DBX2Q6ZNG2 339 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 GDPD3Q7L5L3 318 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 SAMD7Q7Z3H4 446 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 VN1R5Q7Z5H4 357 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 EPHX4Q8IUS5 362 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 UBQLNLQ8IYU4 475 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 GPD1LQ8N335 351 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 CBR4Q8N4T8 237 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 PIK3C3Q8NEB9 887 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 TAS1R2Q8TE23 839 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 CYGBQ8WWM9 190 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 ST8SIA2Q92186 375 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 NRBF2Q96F24 287 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 TRAF4Q9BUZ4 470 aaPredicted RBP7.5□□□□□ -1.21
CDKL5-201ENST00000379989 GLIS2Q9BZE0 524 aaPredicted RBP7.5□□□□□ -1.21
CDKL5-201ENST00000379989 RNPEPQ9H4A4 650 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 DHX33Q9H6R0 707 aaKnown RBP7.5□□□□□ -1.21
CDKL5-201ENST00000379989 PRDM8Q9NQV8 689 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 PNPOQ9NVS9 261 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 ASNSD1Q9NWL6 643 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 HSPBP1Q9NZL4 362 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 WARS2Q9UGM6 360 aaKnown RBP7.5□□□□□ -1.21
CDKL5-201ENST00000379989 SFMBT1Q9UHJ3 866 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 CNOT6Q9ULM6 557 aaKnown RBP7.5□□□□□ -1.21
CDKL5-201ENST00000379989 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.5□□□□□ -1.21
CDKL5-201ENST00000379989 AP4E1Q9UPM8 1137 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 SHOC2Q9UQ13 582 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 C9IYK1 514 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 ADAM11O75078 769 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 KATNA1O75449 491 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 TOM1L1O75674 476 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 FAM155BO75949 473 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 STBD1O95210 358 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 YES1P07947 543 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 ENO3P13929 434 aaPredicted RBP7.5□□□□□ -1.21
CDKL5-201ENST00000379989 HSD17B2P37059 387 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 YWHAEP62258 255 aaKnown RBP7.5□□□□□ -1.21
CDKL5-201ENST00000379989 RHDQ02161 417 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 FPGSQ05932 587 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 INCA1Q0VD86 236 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 TRAP1Q12931 704 aaKnown RBP7.5□□□□□ -1.21
CDKL5-201ENST00000379989 ZNF181Q2M3W8 571 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 FAM26DQ5JW98 314 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 LINC00523Q86TU6 105 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 NOXA1Q86UR1 476 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 PGAM4Q8N0Y7 254 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 CPXCR1Q8N123 301 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 NDUFAF2Q8N183 169 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 FAM83FQ8NEG4 500 aaPredicted RBP7.5□□□□□ -1.21
CDKL5-201ENST00000379989 TESCQ96BS2 214 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 BIRC7Q96CA5 298 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 SEC22CQ9BRL7 303 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 PORCNQ9H237 461 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 TOR3AQ9H497 397 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 ZC4H2Q9NQZ6 224 aa7.5□□□□□ -1.21
CDKL5-201ENST00000379989 LCTP09848 1927 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 ZSWIM8A7E2V4 1837 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 NRP1O14786 923 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 CHMP2AO43633 222 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 SSX4O60224 188 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 TIPRLO75663 272 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 PRKD3O94806 890 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 PRKCBP05771 671 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 RBP1P09455 135 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 BMP1P13497 986 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 ZNF250P15622 560 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 HMGCS2P54868 508 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 OLR1P78380 273 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 POLD3Q15054 466 aaPredicted RBP7.49□□□□□ -1.21
CDKL5-201ENST00000379989 TYSND1Q2T9J0 566 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 METTL11BQ5VVY1 283 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 TMPRSS9Q7Z410 1059 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 AMIGO1Q86WK6 493 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 RHPN2Q8IUC4 686 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 GLB1L3Q8NCI6 653 aaPredicted RBP7.49□□□□□ -1.21
CDKL5-201ENST00000379989 VANGL1Q8TAA9 524 aaPredicted RBP7.49□□□□□ -1.21
CDKL5-201ENST00000379989 NDNFQ8TB73 568 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 FAM110BQ8TC76 370 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 POMGNT1Q8WZA1 660 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms