RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 HOXC4P09017 264 aaPredicted RBP24.68■■□□□ 1.54
TNFRSF4-201ENST00000379236 TNNT1P13805 278 aa24.68■■□□□ 1.54
TNFRSF4-201ENST00000379236 DSC2Q02487 901 aa24.68■■□□□ 1.54
TNFRSF4-201ENST00000379236 CDCP2Q5VXM1 449 aa24.68■■□□□ 1.54
TNFRSF4-201ENST00000379236 CRTC1Q6UUV9 634 aa24.68■■□□□ 1.54
TNFRSF4-201ENST00000379236 PQLC3Q8N755 202 aa24.68■■□□□ 1.54
TNFRSF4-201ENST00000379236 HNRNPLLQ8WVV9 542 aaKnown RBP24.68■■□□□ 1.54
TNFRSF4-201ENST00000379236 RAPGEF5Q92565 580 aa24.68■■□□□ 1.54
TNFRSF4-201ENST00000379236 FATE1Q969F0 183 aa24.68■■□□□ 1.54
TNFRSF4-201ENST00000379236 HDAC11Q96DB2 347 aa24.68■■□□□ 1.54
TNFRSF4-201ENST00000379236 INTUQ9ULD6 942 aa24.68■■□□□ 1.54
TNFRSF4-201ENST00000379236 GPSM3Q9Y4H4 160 aa24.68■■□□□ 1.54
TNFRSF4-201ENST00000379236 HEY1Q9Y5J3 304 aa24.68■■□□□ 1.54
TNFRSF4-201ENST00000379236 DGKBQ9Y6T7 804 aa24.68■■□□□ 1.54
TNFRSF4-201ENST00000379236 URB1O60287 2271 aaKnown RBP24.67■■□□□ 1.54
TNFRSF4-201ENST00000379236 TMEM202A6NGA9 273 aa24.67■■□□□ 1.54
TNFRSF4-201ENST00000379236 MTA2O94776 668 aa24.67■■□□□ 1.54
TNFRSF4-201ENST00000379236 MYCLP1P12525 358 aaPredicted RBP24.67■■□□□ 1.54
TNFRSF4-201ENST00000379236 GM2AP17900 193 aa24.67■■□□□ 1.54
TNFRSF4-201ENST00000379236 ETV3P41162 512 aa24.67■■□□□ 1.54
TNFRSF4-201ENST00000379236 SLC1A1P43005 524 aa24.67■■□□□ 1.54
TNFRSF4-201ENST00000379236 RAET1GQ6H3X3 334 aa24.67■■□□□ 1.54
TNFRSF4-201ENST00000379236 LRRC69Q6ZNQ3 347 aa24.67■■□□□ 1.54
TNFRSF4-201ENST00000379236 TAF8Q7Z7C8 310 aa24.67■■□□□ 1.54
TNFRSF4-201ENST00000379236 WDR48Q8TAF3 677 aa24.67■■□□□ 1.54
TNFRSF4-201ENST00000379236 OR1E3Q8WZA6 343 aa24.67■■□□□ 1.54
TNFRSF4-201ENST00000379236 DTD2Q96FN9 168 aa24.67■■□□□ 1.54
TNFRSF4-201ENST00000379236 MCCC1Q96RQ3 725 aaPredicted RBP24.67■■□□□ 1.54
TNFRSF4-201ENST00000379236 RBM15Q96T37 977 aaKnown RBP eCLIP24.67■■□□□ 1.54
TNFRSF4-201ENST00000379236 CYP4F12Q9HCS2 524 aa24.67■■□□□ 1.54
TNFRSF4-201ENST00000379236 FGF22Q9HCT0 170 aa24.67■■□□□ 1.54
TNFRSF4-201ENST00000379236 MRPL40Q9NQ50 206 aaKnown RBP24.67■■□□□ 1.54
TNFRSF4-201ENST00000379236 DTLQ9NZJ0 730 aa24.67■■□□□ 1.54
TNFRSF4-201ENST00000379236 DNPEPQ9ULA0 475 aa24.67■■□□□ 1.54
TNFRSF4-201ENST00000379236 PCDHB1Q9Y5F3 818 aa24.67■■□□□ 1.54
TNFRSF4-201ENST00000379236 FAM208BQ5VWN6 2430 aa24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 APOL1O14791 398 aa24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 TNFRSF10CO14798 259 aa24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 SPOPO43791 374 aa24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 BRINP1O60477 761 aa24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 USP12O75317 370 aa24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 ZFXP17010 805 aaPredicted RBP24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 TGM2P21980 687 aa24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 LHCGRP22888 699 aa24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 ACTN2P35609 894 aa24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 TRIM23P36406 574 aa24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 PERM1Q5SV97 790 aa24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 SARM1Q6SZW1 724 aa24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 RBM44Q6ZP01 1051 aaKnown RBP24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 HSD11B1LQ7Z5J1 315 aa24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 HEATR4Q86WZ0 1026 aa24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 RFX6Q8HWS3 928 aa24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 RHOT1Q8IXI2 618 aa24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 KYQ8NBH2 561 aa24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 LRRN4Q8WUT4 740 aa24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 PIH1D2Q8WWB5 315 aa24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 CCDC3Q9BQI4 270 aa24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 SUDS3Q9H7L9 328 aaPredicted RBP24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 DDX56Q9NY93 547 aaKnown RBP24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 RALYQ9UKM9 306 aaKnown RBP24.66■■□□□ 1.54
TNFRSF4-201ENST00000379236 ZNF487B1APH4 448 aa24.65■■□□□ 1.54
TNFRSF4-201ENST00000379236 RRP8O43159 456 aaKnown RBP24.65■■□□□ 1.54
TNFRSF4-201ENST00000379236 HLA-DQB2P05538 268 aa24.65■■□□□ 1.54
TNFRSF4-201ENST00000379236 PDHA1P08559 390 aa24.65■■□□□ 1.54
TNFRSF4-201ENST00000379236 NOP2P46087 812 aaKnown RBP24.65■■□□□ 1.54
TNFRSF4-201ENST00000379236 AP1B1Q10567 949 aa24.65■■□□□ 1.54
TNFRSF4-201ENST00000379236 TBX2Q13207 712 aaPredicted RBP24.65■■□□□ 1.54
TNFRSF4-201ENST00000379236 ALG1LQ6GMV1 187 aa24.65■■□□□ 1.54
TNFRSF4-201ENST00000379236 NYAP1Q6ZVC0 841 aa24.65■■□□□ 1.54
TNFRSF4-201ENST00000379236 TSPAN33Q86UF1 283 aa24.65■■□□□ 1.54
TNFRSF4-201ENST00000379236 VSIG1Q86XK7 387 aa24.65■■□□□ 1.54
TNFRSF4-201ENST00000379236 LGR4Q9BXB1 951 aa24.65■■□□□ 1.54
TNFRSF4-201ENST00000379236 TDRD1Q9BXT4 1180 aaKnown RBP24.65■■□□□ 1.54
TNFRSF4-201ENST00000379236 CHKBQ9Y259 395 aa24.65■■□□□ 1.54
TNFRSF4-201ENST00000379236 PPIL1Q9Y3C6 166 aa24.65■■□□□ 1.54
TNFRSF4-201ENST00000379236 A0A0J9YYE9 177 aa24.64■■□□□ 1.54
TNFRSF4-201ENST00000379236 PRSS38A1L453 326 aa24.64■■□□□ 1.54
TNFRSF4-201ENST00000379236 PPP1R12AO14974 1030 aaPredicted RBP24.64■■□□□ 1.54
TNFRSF4-201ENST00000379236 TCEA3O75764 348 aa24.64■■□□□ 1.54
TNFRSF4-201ENST00000379236 TRBC1P01850 177 aa24.64■■□□□ 1.54
TNFRSF4-201ENST00000379236 ZNF30P17039 623 aa24.64■■□□□ 1.54
TNFRSF4-201ENST00000379236 GPR1P46091 355 aa24.64■■□□□ 1.54
TNFRSF4-201ENST00000379236 SLC10A2Q12908 348 aaPredicted RBP24.64■■□□□ 1.54
TNFRSF4-201ENST00000379236 SPIDRQ14159 915 aa24.64■■□□□ 1.54
TNFRSF4-201ENST00000379236 COL28A1Q2UY09 1125 aa24.64■■□□□ 1.54
TNFRSF4-201ENST00000379236 LRRC38Q5VT99 294 aa24.64■■□□□ 1.54
TNFRSF4-201ENST00000379236 LRRC66Q68CR7 880 aa24.64■■□□□ 1.54
TNFRSF4-201ENST00000379236 Q6ZVL8 140 aa24.64■■□□□ 1.54
TNFRSF4-201ENST00000379236 FAM46DQ8NEK8 389 aa24.64■■□□□ 1.54
TNFRSF4-201ENST00000379236 LPCAT1Q8NF37 534 aa24.64■■□□□ 1.54
TNFRSF4-201ENST00000379236 OR6C4Q8NGE1 309 aa24.64■■□□□ 1.54
TNFRSF4-201ENST00000379236 CARS2Q9HA77 564 aaKnown RBP24.64■■□□□ 1.54
TNFRSF4-201ENST00000379236 PCDH9Q9HC56 1237 aa24.64■■□□□ 1.54
TNFRSF4-201ENST00000379236 LUC7LQ9NQ29 371 aaKnown RBP24.64■■□□□ 1.54
TNFRSF4-201ENST00000379236 CD84Q9UIB8 345 aa24.64■■□□□ 1.54
TNFRSF4-201ENST00000379236 COL27A1Q8IZC6 1860 aaPredicted RBP24.64■■□□□ 1.53
TNFRSF4-201ENST00000379236 LAMA5O15230 3695 aa24.64■■□□□ 1.53
TNFRSF4-201ENST00000379236 FZD6O60353 706 aa24.63■■□□□ 1.53
TNFRSF4-201ENST00000379236 JCHAINP01591 159 aa24.63■■□□□ 1.53
TNFRSF4-201ENST00000379236 MAGEA1P43355 309 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms