RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 HMGB4Q8WW32 186 aa15.8■□□□□ 0.12
CCDC107-204ENST00000378409 PBXIP1Q96AQ6 731 aa15.8■□□□□ 0.12
CCDC107-204ENST00000378409 DNAJC1Q96KC8 554 aaKnown RBP15.8■□□□□ 0.12
CCDC107-204ENST00000378409 MRGPRX1Q96LB2 322 aa15.8■□□□□ 0.12
CCDC107-204ENST00000378409 CHRDQ9H2X0 955 aa15.8■□□□□ 0.12
CCDC107-204ENST00000378409 TREX1Q9NSU2 369 aa15.8■□□□□ 0.12
CCDC107-204ENST00000378409 C2orf42Q9NWW7 574 aa15.8■□□□□ 0.12
CCDC107-204ENST00000378409 SERGEFQ9UGK8 458 aa15.8■□□□□ 0.12
CCDC107-204ENST00000378409 GGT7Q9UJ14 662 aa15.8■□□□□ 0.12
CCDC107-204ENST00000378409 PKP3Q9Y446 797 aa15.8■□□□□ 0.12
CCDC107-204ENST00000378409 TECTAO75443 2155 aa15.8■□□□□ 0.12
CCDC107-204ENST00000378409 A0A087WUV0 522 aaPredicted RBP15.79■□□□□ 0.12
CCDC107-204ENST00000378409 TCRBV9S1A1TA0A576 114 aa15.79■□□□□ 0.12
CCDC107-204ENST00000378409 CCL22O00626 93 aa15.79■□□□□ 0.12
CCDC107-204ENST00000378409 NEMP1O14524 444 aa15.79■□□□□ 0.12
CCDC107-204ENST00000378409 STX7O15400 261 aaKnown RBP15.79■□□□□ 0.12
CCDC107-204ENST00000378409 SPINT1O43278 529 aa15.79■□□□□ 0.12
CCDC107-204ENST00000378409 DCNP07585 359 aaKnown RBP15.79■□□□□ 0.12
CCDC107-204ENST00000378409 ABHD2P08910 425 aa15.79■□□□□ 0.12
CCDC107-204ENST00000378409 ACADMP11310 421 aa15.79■□□□□ 0.12
CCDC107-204ENST00000378409 PAMP19021 973 aa15.79■□□□□ 0.12
CCDC107-204ENST00000378409 STX2P32856 288 aa15.79■□□□□ 0.12
CCDC107-204ENST00000378409 RPS9P46781 194 aaKnown RBP15.79■□□□□ 0.12
CCDC107-204ENST00000378409 ZBTB16Q05516 673 aa15.79■□□□□ 0.12
CCDC107-204ENST00000378409 CCDC15Q0P6D6 951 aa15.79■□□□□ 0.12
CCDC107-204ENST00000378409 CNGA3Q16281 694 aa15.79■□□□□ 0.12
CCDC107-204ENST00000378409 CDKN3Q16667 212 aa15.79■□□□□ 0.12
CCDC107-204ENST00000378409 SKIDA1Q1XH10 827 aa15.79■□□□□ 0.12
CCDC107-204ENST00000378409 AGBL4Q5VU57 503 aa15.79■□□□□ 0.12
CCDC107-204ENST00000378409 UNC5BQ8IZJ1 945 aa15.79■□□□□ 0.12
CCDC107-204ENST00000378409 PGBD3Q8N328 593 aa15.79■□□□□ 0.12
CCDC107-204ENST00000378409 TSTD1Q8NFU3 115 aa15.79■□□□□ 0.12
CCDC107-204ENST00000378409 FBF1Q8TES7 1133 aa15.79■□□□□ 0.12
CCDC107-204ENST00000378409 RAB7BQ96AH8 199 aa15.79■□□□□ 0.12
CCDC107-204ENST00000378409 WRAP53Q9BUR4 548 aaKnown RBP15.79■□□□□ 0.12
CCDC107-204ENST00000378409 BPIFA1Q9NP55 256 aa15.79■□□□□ 0.12
CCDC107-204ENST00000378409 NLE1Q9NVX2 485 aaPredicted RBP15.79■□□□□ 0.12
CCDC107-204ENST00000378409 FBXL12Q9NXK8 326 aa15.79■□□□□ 0.12
CCDC107-204ENST00000378409 BCCIPQ9P287 314 aaKnown RBP eCLIP15.79■□□□□ 0.12
CCDC107-204ENST00000378409 RIMKLBQ9ULI2 386 aa15.79■□□□□ 0.12
CCDC107-204ENST00000378409 SCML1Q9UN30 329 aa15.79■□□□□ 0.12
CCDC107-204ENST00000378409 FAM169AQ9Y6X4 670 aa15.79■□□□□ 0.12
CCDC107-204ENST00000378409 PLXNB3Q9ULL4 1909 aa15.78■□□□□ 0.12
CCDC107-204ENST00000378409 ZCWPW2A0A1B0GU75 182 aa15.78■□□□□ 0.12
CCDC107-204ENST00000378409 AREL1O15033 823 aa15.78■□□□□ 0.12
CCDC107-204ENST00000378409 PDGFBP01127 241 aaPredicted RBP15.78■□□□□ 0.12
CCDC107-204ENST00000378409 C1SP09871 688 aa15.78■□□□□ 0.12
CCDC107-204ENST00000378409 ELFN1P0C7U0 828 aa15.78■□□□□ 0.12
CCDC107-204ENST00000378409 ZNF30P17039 623 aa15.78■□□□□ 0.12
CCDC107-204ENST00000378409 HMGCLP35914 325 aa15.78■□□□□ 0.12
CCDC107-204ENST00000378409 RALGDSQ12967 914 aa15.78■□□□□ 0.12
CCDC107-204ENST00000378409 CASP8Q14790 479 aa15.78■□□□□ 0.12
CCDC107-204ENST00000378409 LONRF1Q17RB8 773 aa15.78■□□□□ 0.12
CCDC107-204ENST00000378409 KIAA0930Q6ICG6 404 aaPredicted RBP15.78■□□□□ 0.12
CCDC107-204ENST00000378409 TRMT10BQ6PF06 316 aaKnown RBP15.78■□□□□ 0.12
CCDC107-204ENST00000378409 HDXQ7Z353 690 aa15.78■□□□□ 0.12
CCDC107-204ENST00000378409 SPEM1Q8N4L4 309 aa15.78■□□□□ 0.12
CCDC107-204ENST00000378409 OR13J1Q8NGT2 312 aa15.78■□□□□ 0.12
CCDC107-204ENST00000378409 PEX13Q92968 403 aa15.78■□□□□ 0.12
CCDC107-204ENST00000378409 EID2BQ96D98 161 aa15.78■□□□□ 0.12
CCDC107-204ENST00000378409 CERS2Q96G23 380 aa15.78■□□□□ 0.12
CCDC107-204ENST00000378409 HHIPQ96QV1 700 aa15.78■□□□□ 0.12
CCDC107-204ENST00000378409 PPANQ9NQ55 473 aaKnown RBP15.78■□□□□ 0.12
CCDC107-204ENST00000378409 C20orf96Q9NUD7 363 aaPredicted RBP15.78■□□□□ 0.12
CCDC107-204ENST00000378409 IL1RAPL1Q9NZN1 696 aa15.78■□□□□ 0.12
CCDC107-204ENST00000378409 IL17CQ9P0M4 197 aa15.78■□□□□ 0.12
CCDC107-204ENST00000378409 FNDC3AQ9Y2H6 1198 aaKnown RBP15.78■□□□□ 0.12
CCDC107-204ENST00000378409 FADS3Q9Y5Q0 445 aa15.78■□□□□ 0.12
CCDC107-204ENST00000378409 MUC3AQ02505 3323 aa15.77■□□□□ 0.12
CCDC107-204ENST00000378409 GOLGA8CPA6NN73 597 aa15.77■□□□□ 0.12
CCDC107-204ENST00000378409 RPP40O75818 363 aaKnown RBP15.77■□□□□ 0.12
CCDC107-204ENST00000378409 ALDH1A2O94788 518 aa15.77■□□□□ 0.12
CCDC107-204ENST00000378409 VAPBO95292 243 aa15.77■□□□□ 0.12
CCDC107-204ENST00000378409 ERVK-10P10266 1014 aa15.77■□□□□ 0.12
CCDC107-204ENST00000378409 HADHAP40939 763 aa15.77■□□□□ 0.12
CCDC107-204ENST00000378409 ARSDP51689 593 aa15.77■□□□□ 0.12
CCDC107-204ENST00000378409 STC1P52823 247 aa15.77■□□□□ 0.12
CCDC107-204ENST00000378409 PRAMEP78395 509 aa15.77■□□□□ 0.12
CCDC107-204ENST00000378409 PTSQ03393 145 aa15.77■□□□□ 0.12
CCDC107-204ENST00000378409 ACVR1Q04771 509 aa15.77■□□□□ 0.12
CCDC107-204ENST00000378409 SFSWAPQ12872 951 aaKnown RBP15.77■□□□□ 0.12
CCDC107-204ENST00000378409 MTAPQ13126 283 aa15.77■□□□□ 0.12
CCDC107-204ENST00000378409 CWF19L1Q69YN2 538 aaKnown RBP15.77■□□□□ 0.12
CCDC107-204ENST00000378409 ANO7Q6IWH7 933 aa15.77■□□□□ 0.12
CCDC107-204ENST00000378409 LIPIQ6XZB0 460 aa15.77■□□□□ 0.12
CCDC107-204ENST00000378409 KCNMB4Q86W47 210 aa15.77■□□□□ 0.12
CCDC107-204ENST00000378409 RASSF3Q86WH2 238 aa15.77■□□□□ 0.12
CCDC107-204ENST00000378409 OR6P1Q8NGX9 317 aa15.77■□□□□ 0.12
CCDC107-204ENST00000378409 HDAC10Q969S8 669 aa15.77■□□□□ 0.12
CCDC107-204ENST00000378409 TBATAQ96M53 351 aa15.77■□□□□ 0.12
CCDC107-204ENST00000378409 PKD2L2Q9NZM6 624 aa15.77■□□□□ 0.12
CCDC107-204ENST00000378409 FKBPLQ9UIM3 349 aa15.77■□□□□ 0.12
CCDC107-204ENST00000378409 PLAAQ9Y263 795 aa15.77■□□□□ 0.12
CCDC107-204ENST00000378409 NCKAP1Q9Y2A7 1128 aa15.77■□□□□ 0.12
CCDC107-204ENST00000378409 EML5Q05BV3 1969 aa15.76■□□□□ 0.11
CCDC107-204ENST00000378409 GOLGA8KD6RF30 607 aa15.76■□□□□ 0.11
CCDC107-204ENST00000378409 GOLGA8TH3BQL2 631 aa15.76■□□□□ 0.11
CCDC107-204ENST00000378409 AP1G1O43747 822 aa15.76■□□□□ 0.11
CCDC107-204ENST00000378409 SHBGP04278 402 aa15.76■□□□□ 0.11
CCDC107-204ENST00000378409 C7P10643 843 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms