RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 KCNQ1P51787 676 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 ATP6V0D1P61421 351 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 SQLEQ14534 574 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 TRIP4Q15650 581 aaPredicted RBP13.21□□□□□ -0.29
NPHP4-203ENST00000378169 ITFG1Q8TB96 612 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 ZCCHC2Q9C0B9 1178 aaKnown RBP13.21□□□□□ -0.29
NPHP4-203ENST00000378169 STN1Q9H668 368 aaKnown RBP13.21□□□□□ -0.29
NPHP4-203ENST00000378169 TRPC4Q9UBN4 977 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 IQCF5A8MTL0 148 aa13.21□□□□□ -0.3
NPHP4-203ENST00000378169 H3BMM5 538 aa13.21□□□□□ -0.3
NPHP4-203ENST00000378169 J3KR12 359 aa13.21□□□□□ -0.3
NPHP4-203ENST00000378169 TGDSO95455 350 aa13.21□□□□□ -0.3
NPHP4-203ENST00000378169 GOT2P00505 430 aaKnown RBP13.21□□□□□ -0.3
NPHP4-203ENST00000378169 PRKCGP05129 697 aa13.21□□□□□ -0.3
NPHP4-203ENST00000378169 SMARCB1Q12824 385 aa13.21□□□□□ -0.3
NPHP4-203ENST00000378169 RALGDSQ12967 914 aa13.21□□□□□ -0.3
NPHP4-203ENST00000378169 MAD2L1Q13257 205 aaPredicted RBP13.21□□□□□ -0.3
NPHP4-203ENST00000378169 MAPKAPK3Q16644 382 aa13.21□□□□□ -0.3
NPHP4-203ENST00000378169 UBAP2Q5T6F2 1119 aaKnown RBP13.21□□□□□ -0.3
NPHP4-203ENST00000378169 DHDDSQ86SQ9 333 aa13.21□□□□□ -0.3
NPHP4-203ENST00000378169 MYO19Q96H55 970 aa13.21□□□□□ -0.3
NPHP4-203ENST00000378169 FUBP3Q96I24 572 aaKnown RBP eCLIP13.21□□□□□ -0.3
NPHP4-203ENST00000378169 TPD52L3Q96J77 140 aa13.21□□□□□ -0.3
NPHP4-203ENST00000378169 RERGLQ9H628 205 aa13.21□□□□□ -0.3
NPHP4-203ENST00000378169 SSU72Q9NP77 194 aaKnown RBP13.21□□□□□ -0.3
NPHP4-203ENST00000378169 HECAQ9UBI9 543 aaPredicted RBP13.21□□□□□ -0.3
NPHP4-203ENST00000378169 SLC12A4Q9UP95 1085 aa13.21□□□□□ -0.3
NPHP4-203ENST00000378169 LZTS1Q9Y250 596 aa13.21□□□□□ -0.3
NPHP4-203ENST00000378169 NAV1Q8NEY1 1877 aa13.21□□□□□ -0.3
NPHP4-203ENST00000378169 SIPA1L3O60292 1781 aaPredicted RBP13.2□□□□□ -0.3
NPHP4-203ENST00000378169 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.2□□□□□ -0.3
NPHP4-203ENST00000378169 FAM72CH0Y354 149 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 GLUD1P00367 558 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 VCLP18206 1134 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 PPM1AP35813 382 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 HPCAP84074 193 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 NRG1Q02297 640 aaPredicted RBP13.2□□□□□ -0.3
NPHP4-203ENST00000378169 ZNF252P-AS1Q0IIN9 211 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 CCDC85BQ15834 202 aaPredicted RBP13.2□□□□□ -0.3
NPHP4-203ENST00000378169 LDLRAD1Q5T700 205 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 FAM72AQ5TYM5 149 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 FAM72DQ6L9T8 149 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 RINLQ6ZS11 566 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 FAM72BQ86X60 149 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 ZNF614Q8N883 585 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 OR13C4Q8NGS5 318 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 SUSD3Q96L08 255 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 TMEM209Q96SK2 561 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 ACAT2Q9BWD1 397 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 SLC45A1Q9Y2W3 748 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 PSAT1Q9Y617 370 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 LRATO95237 230 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 PGM3O95394 542 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 HNF4AP41235 474 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 PLCL1Q15111 1095 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 TCEAL1Q15170 157 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 ATXN7L2Q5T6C5 722 aaPredicted RBP13.2□□□□□ -0.3
NPHP4-203ENST00000378169 GCNT7Q6ZNI0 430 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 RNF168Q8IYW5 571 aaPredicted RBP13.2□□□□□ -0.3
NPHP4-203ENST00000378169 SLC7A5P2Q9GIP4 190 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 GIMAP4Q9NUV9 329 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 CIDEBQ9UHD4 219 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 ZNF711Q9Y462 761 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 TRAFD1O14545 582 aaPredicted RBP13.2□□□□□ -0.3
NPHP4-203ENST00000378169 TLL1O43897 1013 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 SLC25A14O95258 325 aaPredicted RBP13.2□□□□□ -0.3
NPHP4-203ENST00000378169 FCGR1AP12314 374 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 VAV1P15498 845 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 SCNN1AP37088 669 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 RAD23AP54725 363 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 MLLT6P55198 1093 aaPredicted RBP13.2□□□□□ -0.3
NPHP4-203ENST00000378169 KHDC1Q4VXA5 237 aaKnown RBP13.2□□□□□ -0.3
NPHP4-203ENST00000378169 RALGPS1Q5JS13 557 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 TMEM198Q66K66 360 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 PRMT9Q6P2P2 845 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 AGMOQ6ZNB7 445 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 GPR141Q7Z602 305 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 ZNF280BQ86YH2 543 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 PLD3Q8IV08 490 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 RBFAQ8N0V3 343 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 CLHC1Q8NHS4 586 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 MAGEE2Q8TD90 523 aaPredicted RBP13.2□□□□□ -0.3
NPHP4-203ENST00000378169 KCTD13Q8WZ19 329 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 VPS33AQ96AX1 596 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 SIGLEC10Q96LC7 697 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 HAPLN3Q96S86 360 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 ARHGAP39Q9C0H5 1083 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 ADAM7Q9H2U9 754 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 FKBPLQ9UIM3 349 aa13.2□□□□□ -0.3
NPHP4-203ENST00000378169 CCL16O15467 120 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 VPS4BO75351 444 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 GRK3P35626 688 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 IL5RAQ01344 420 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 TLE2Q04725 743 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 ZBTB17Q13105 803 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 SGCGQ13326 291 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 SIX1Q15475 284 aaPredicted RBP13.19□□□□□ -0.3
NPHP4-203ENST00000378169 AP5B1Q2VPB7 878 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 PPP1R15BQ5SWA1 713 aa13.19□□□□□ -0.3
NPHP4-203ENST00000378169 LPCAT4Q643R3 524 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms