RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 ARMC7Q9H6L4 198 aa16.65■□□□□ 0.26
PCDHA1-201ENST00000378133 NMRK2Q9NPI5 230 aa16.65■□□□□ 0.26
PCDHA1-201ENST00000378133 NDFIP2Q9NV92 336 aa16.65■□□□□ 0.26
PCDHA1-201ENST00000378133 CROTQ9UKG9 612 aa16.65■□□□□ 0.26
PCDHA1-201ENST00000378133 DLGAP1O14490 977 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 ANXA9O76027 345 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 INHBBP09529 407 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 DCKP27707 260 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 HOXD12P35452 270 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 ZNF135P52742 658 aaPredicted RBP16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 CSHL1Q14406 222 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 TMEM86AQ8N2M4 240 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 MFSD2AQ8NA29 543 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 SPPL2BQ8TCT7 592 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 MS4A4AQ96JQ5 239 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 DOK1Q99704 481 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 SLC39A8Q9C0K1 460 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 POLR1BQ9H9Y6 1135 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 ARMC1Q9NVT9 282 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 CDH9Q9ULB4 789 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 AURKCQ9UQB9 309 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 TCAF1Q9Y4C2 921 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 PTCH2Q9Y6C5 1203 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 RNF103-CHMP3A0A140T963 221 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 CASTOR2A6NHX0 329 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 UBDO15205 165 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 MAFKO60675 156 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 SNRPB2P08579 225 aaKnown RBP16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 MYL3P08590 195 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 SLC12A2P55011 1212 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 SEPT6Q14141 434 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 MAP7D1Q3KQU3 841 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 PLEKHH3Q7Z736 793 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 KLHDC8BQ8IXV7 354 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 OR2T34Q8NGX1 318 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 OR2T3Q8NH03 318 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 MYLPFQ96A32 169 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 MRPL57Q9BQC6 102 aaKnown RBP16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 OSBPL2Q9H1P3 480 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 TMEM181Q9P2C4 612 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 FBXO5Q9UKT4 447 aa16.64■□□□□ 0.25
PCDHA1-201ENST00000378133 TMEM247A6NEH6 219 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 SOBPA7XYQ1 873 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 MRASO14807 208 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 NPHS1O60500 1241 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 THP07101 528 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 KCNA5P22460 613 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 RXRGP48443 463 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 BMXP51813 675 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 SQLEQ14534 574 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 MOGQ16653 247 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 PAN2Q504Q3 1202 aaKnown RBP16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 PITRM1Q5JRX3 1037 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 RBM20Q5T481 1227 aaKnown RBP16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 PACRGLQ8N7B6 248 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 SNX31Q8N9S9 440 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 SCAMP5Q8TAC9 235 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 CYGBQ8WWM9 190 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 ARPC5LQ9BPX5 153 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 NEURL2Q9BR09 285 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 FSD1LQ9BXM9 530 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 NAA50Q9GZZ1 169 aaKnown RBP16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 TNFRSF12AQ9NP84 129 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 RBM22Q9NW64 420 aaKnown RBP eCLIP16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 NEU3Q9UQ49 428 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 FAM149AA5PLN7 773 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 ADAM23O75077 832 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 GPC4O75487 556 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 SRP72O76094 671 aaKnown RBP16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 CLIC3O95833 236 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 SLC7A2P52569 658 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 PLK1P53350 603 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 ZNF789Q5FWF6 425 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 NOMO2Q5JPE7 1267 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 TBCELQ5QJ74 424 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 FAM219BQ5XKK7 198 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 PIWIL4Q7Z3Z4 852 aaKnown RBP16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 TERB1Q8NA31 727 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 C2CD4AQ8NCU7 369 aaPredicted RBP16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 BRI3BPQ8WY22 251 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 IL12RB2Q99665 862 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 GMPR2Q9P2T1 348 aaKnown RBP16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 DOCK3Q8IZD9 2030 aa16.63■□□□□ 0.25
PCDHA1-201ENST00000378133 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.62■□□□□ 0.25
PCDHA1-201ENST00000378133 J3QRK9 145 aa16.62■□□□□ 0.25
PCDHA1-201ENST00000378133 ALDH2P05091 517 aa16.62■□□□□ 0.25
PCDHA1-201ENST00000378133 HLA-DQB2P05538 268 aa16.62■□□□□ 0.25
PCDHA1-201ENST00000378133 ATP5F1P24539 256 aaPredicted RBP16.62■□□□□ 0.25
PCDHA1-201ENST00000378133 DNAJB1P25685 340 aa16.62■□□□□ 0.25
PCDHA1-201ENST00000378133 POLD2P49005 469 aa16.62■□□□□ 0.25
PCDHA1-201ENST00000378133 ZNF33AQ06730 810 aa16.62■□□□□ 0.25
PCDHA1-201ENST00000378133 PCSK7Q16549 785 aa16.62■□□□□ 0.25
PCDHA1-201ENST00000378133 TIGD5Q53EQ6 642 aa16.62■□□□□ 0.25
PCDHA1-201ENST00000378133 INTS11Q5TA45 600 aaKnown RBP16.62■□□□□ 0.25
PCDHA1-201ENST00000378133 ANKRD26P1Q6NSI1 321 aa16.62■□□□□ 0.25
PCDHA1-201ENST00000378133 ZBTB46Q86UZ6 589 aa16.62■□□□□ 0.25
PCDHA1-201ENST00000378133 CHPT1Q8WUD6 406 aa16.62■□□□□ 0.25
PCDHA1-201ENST00000378133 FBXL8Q96CD0 374 aa16.62■□□□□ 0.25
PCDHA1-201ENST00000378133 DHRS1Q96LJ7 313 aa16.62■□□□□ 0.25
PCDHA1-201ENST00000378133 SLC39A3Q9BRY0 314 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms