RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 TFECO14948 347 aaPredicted RBP16.34■□□□□ 0.21
RGP1-201ENST00000378078 STX11O75558 287 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 SLURP2P0DP57 97 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 PTPN4P29074 926 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 RPL22P35268 128 aaKnown RBP16.34■□□□□ 0.21
RGP1-201ENST00000378078 HSPB3Q12988 150 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 DCBLD1Q8N8Z6 715 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 RXFP1Q9HBX9 757 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 PCDH9Q9HC56 1237 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 EME2A4GXA9 379 aaPredicted RBP16.34■□□□□ 0.21
RGP1-201ENST00000378078 EML1O00423 815 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 SLC26A4O43511 780 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 SETD9Q8NE22 299 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 SLC22A8Q8TCC7 542 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 CYP2S1Q96SQ9 504 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 MAP3K14Q99558 947 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 HYKKA2RU49 373 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 H3BNH8 94 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 SLC6A2P23975 617 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 DHPSP49366 369 aaPredicted RBP16.34■□□□□ 0.21
RGP1-201ENST00000378078 OC90Q02509 493 aaPredicted RBP16.34■□□□□ 0.21
RGP1-201ENST00000378078 SAMD4BQ5PRF9 694 aaKnown RBP16.34■□□□□ 0.21
RGP1-201ENST00000378078 BRSK1Q8TDC3 778 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 TCF25Q9BQ70 676 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 LDAHQ9H6V9 325 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 NECTIN3Q9NQS3 549 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 CHST7Q9NS84 486 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 AGO1Q9UL18 857 aaKnown RBP16.34■□□□□ 0.21
RGP1-201ENST00000378078 UMODL1Q5DID0 1318 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 KHNYNO15037 678 aaKnown RBP16.34■□□□□ 0.21
RGP1-201ENST00000378078 GCATO75600 419 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 SLC26A2P50443 739 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 RHBDF2Q6PJF5 856 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 BEND5Q7L4P6 421 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 CACNG4Q9UBN1 327 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 ALKQ9UM73 1620 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 FAM46CQ5VWP2 391 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 CHST15Q7LFX5 561 aaPredicted RBP16.34■□□□□ 0.21
RGP1-201ENST00000378078 SAMD3Q8N6K7 520 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 B3GALT6Q96L58 329 aa16.34■□□□□ 0.21
RGP1-201ENST00000378078 C2orf71A6NGG8 1288 aa16.33■□□□□ 0.21
RGP1-201ENST00000378078 RFXANKO14593 260 aa16.33■□□□□ 0.21
RGP1-201ENST00000378078 MAGEC1O60732 1142 aa16.33■□□□□ 0.21
RGP1-201ENST00000378078 TOB1P50616 345 aaPredicted RBP16.33■□□□□ 0.21
RGP1-201ENST00000378078 SLC13A2Q13183 592 aa16.33■□□□□ 0.21
RGP1-201ENST00000378078 CXXC5Q7LFL8 322 aaKnown RBP16.33■□□□□ 0.21
RGP1-201ENST00000378078 RALGPS2Q86X27 583 aaPredicted RBP16.33■□□□□ 0.21
RGP1-201ENST00000378078 STK40Q8N2I9 435 aa16.33■□□□□ 0.21
RGP1-201ENST00000378078 FAM84AQ96KN4 292 aa16.33■□□□□ 0.21
RGP1-201ENST00000378078 MBOAT7Q96N66 472 aa16.33■□□□□ 0.21
RGP1-201ENST00000378078 NPAS2Q99743 824 aa16.33■□□□□ 0.21
RGP1-201ENST00000378078 DUS2Q9NX74 493 aaKnown RBP16.33■□□□□ 0.21
RGP1-201ENST00000378078 SAMHD1Q9Y3Z3 626 aaKnown RBP16.33■□□□□ 0.21
RGP1-201ENST00000378078 TRUB2O95900 331 aaKnown RBP16.33■□□□□ 0.21
RGP1-201ENST00000378078 IFNA6P05013 189 aa16.33■□□□□ 0.21
RGP1-201ENST00000378078 TIE1P35590 1138 aa16.33■□□□□ 0.21
RGP1-201ENST00000378078 RXRGP48443 463 aa16.33■□□□□ 0.21
RGP1-201ENST00000378078 SLC34A3Q8N130 599 aa16.33■□□□□ 0.21
RGP1-201ENST00000378078 ZMIZ2Q8NF64 920 aa16.33■□□□□ 0.21
RGP1-201ENST00000378078 SETD7Q8WTS6 366 aaKnown RBP16.33■□□□□ 0.21
RGP1-201ENST00000378078 C9orf16Q9BUW7 83 aa16.33■□□□□ 0.21
RGP1-201ENST00000378078 ZNF490Q9ULM2 529 aaPredicted RBP16.33■□□□□ 0.21
RGP1-201ENST00000378078 PCP4L1A6NKN8 68 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 NFATC2Q13469 925 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 DDX20Q9UHI6 824 aaKnown RBP16.33■□□□□ 0.2
RGP1-201ENST00000378078 EVLQ9UI08 416 aaPredicted RBP16.33■□□□□ 0.2
RGP1-201ENST00000378078 MED31Q9Y3C7 131 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 IRF6O14896 467 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 TRAPPC6AO75865 159 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 NR0B1P51843 470 aaKnown RBP16.33■□□□□ 0.2
RGP1-201ENST00000378078 NEPROQ6NW34 567 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 TMC3Q7Z5M5 1100 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 AMIGO2Q86SJ2 522 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 ARMC10Q8N2F6 343 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 HDAC10Q969S8 669 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 ALG2Q9H553 416 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 BRD7Q9NPI1 651 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 TMEM216Q9P0N5 145 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 SLC28A1O00337 649 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 B4GALT5O43286 388 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 CYP1A1P04798 512 aaPredicted RBP16.33■□□□□ 0.2
RGP1-201ENST00000378078 GNPDA1P46926 289 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 ZNF410Q86VK4 478 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 GSDMCQ9BYG8 508 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 NMUR1Q9HB89 426 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 B4DGG1 531 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 WRBO00258 174 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 MSLNQ13421 630 aaPredicted RBP16.33■□□□□ 0.2
RGP1-201ENST00000378078 MYBPC3Q14896 1274 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 TREML2Q5T2D2 321 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 POC5Q8NA72 575 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 KIAA0895Q8NCT3 520 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 STAG3L4Q8TBR4 150 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 TBX5Q99593 518 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 PLGRKTQ9HBL7 147 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 SNX10Q9Y5X0 201 aa16.33■□□□□ 0.2
RGP1-201ENST00000378078 AKAP8O43823 692 aaKnown RBP16.32■□□□□ 0.2
RGP1-201ENST00000378078 KDELR1P24390 212 aa16.32■□□□□ 0.2
RGP1-201ENST00000378078 RPL14P50914 215 aaKnown RBP16.32■□□□□ 0.2
RGP1-201ENST00000378078 RPS6KA3P51812 740 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms