RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 AP1M1Q9BXS5 423 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 TRABDQ9H4I3 376 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 LRRC40Q9H9A6 602 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 FZD3Q9NPG1 666 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 COQ6Q9Y2Z9 468 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 FAM186AA6NE01 2351 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 USP34Q70CQ2 3546 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 ZNF292O60281 2723 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 C1orf232A0A0U1RR37 186 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 F5H423 210 aaPredicted RBP13.25□□□□□ -0.29
CKAP2-202ENST00000378034 PHF2O75151 1096 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 GM2AP17900 193 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 HOXD11P31277 338 aaPredicted RBP13.25□□□□□ -0.29
CKAP2-202ENST00000378034 CTSKP43235 329 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 FNTAP49354 379 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 STC1P52823 247 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 LIMK1P53667 647 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 ATXN3P54252 364 aaPredicted RBP13.25□□□□□ -0.29
CKAP2-202ENST00000378034 NXPH1P58417 271 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 WSCD2Q2TBF2 565 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 KCTD11Q693B1 232 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 HSD11B1LQ7Z5J1 315 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 TECPR1Q7Z6L1 1165 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 CREG2Q8IUH2 290 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 KIAA2013Q8IYS2 634 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 NRSN1Q8IZ57 195 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 DTD2Q96FN9 168 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 EDEM2Q9BV94 578 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 ERVMER34-1Q9H9K5 563 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 ARNT2Q9HBZ2 717 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 RAD18Q9NS91 495 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.25□□□□□ -0.29
CKAP2-202ENST00000378034 RIF1Q5UIP0 2472 aaKnown RBP13.25□□□□□ -0.29
CKAP2-202ENST00000378034 EP300Q09472 2414 aaPredicted RBP13.24□□□□□ -0.29
CKAP2-202ENST00000378034 CLDN7O95471 211 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 CER1O95813 267 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 AGTP01019 485 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 THEGLP0DJG4 465 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 IGFALSP35858 605 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 COILP38432 576 aaPredicted RBP13.24□□□□□ -0.29
CKAP2-202ENST00000378034 PAFAH1B1P43034 410 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 KCNJ1P48048 391 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 CLDN2P57739 230 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 PFN3P60673 137 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 BNC1Q01954 994 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 DPTQ07507 201 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 MTM1Q13496 603 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 IRF4Q15306 451 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 KIF19Q2TAC6 998 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 ESRP1Q6NXG1 681 aaKnown RBP13.24□□□□□ -0.29
CKAP2-202ENST00000378034 ZNF765Q7L2R6 523 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 OXR1Q8N573 874 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 GRK7Q8WTQ7 553 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 NUS1Q96E22 293 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 MYOCQ99972 504 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 TBL1YQ9BQ87 522 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 FICDQ9BVA6 458 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 CDH19Q9H159 772 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 ZFYVE1Q9HBF4 777 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 TMEM9BQ9NQ34 198 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 GDF3Q9NR23 364 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 GPR27Q9NS67 375 aa13.24□□□□□ -0.29
CKAP2-202ENST00000378034 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.24□□□□□ -0.29
CKAP2-202ENST00000378034 POM121BA6NF01 834 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 FANCGO15287 622 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 AP2A1O95782 977 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 PYGLP06737 847 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 TEAD1P28347 426 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 SEMA5AQ13591 1074 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 PTPRRQ15256 657 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 ZNF423Q2M1K9 1284 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 DENND2CQ68D51 928 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 CCDC137Q6PK04 289 aaKnown RBP13.23□□□□□ -0.29
CKAP2-202ENST00000378034 SYT10Q6XYQ8 523 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 Q6ZSR6 202 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 TMC3Q7Z5M5 1100 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 PTAR1Q7Z6K3 402 aaPredicted RBP13.23□□□□□ -0.29
CKAP2-202ENST00000378034 LINC00523Q86TU6 105 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 SLC25A41Q8N5S1 370 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 SMIM14Q96QK8 99 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 ETNK1Q9HBU6 452 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 MBNL1Q9NR56 388 aaKnown RBP13.23□□□□□ -0.29
CKAP2-202ENST00000378034 SMARCAL1Q9NZC9 954 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 PKD2L2Q9NZM6 624 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 CA5BQ9Y2D0 317 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 ZNF711Q9Y462 761 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 SNX11Q9Y5W9 270 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 FRYLO94915 3013 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 PIEZO1Q92508 2521 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 ADAMTS9Q9P2N4 1935 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 TP53BP1Q12888 1972 aaPredicted RBP13.23□□□□□ -0.29
CKAP2-202ENST00000378034 H0Y8X5 98 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 HOXC4P09017 264 aaPredicted RBP13.23□□□□□ -0.29
CKAP2-202ENST00000378034 C1SP09871 688 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 ZNF883P0CG24 379 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 ETS1P14921 441 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 TSHRP16473 764 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 SDHBP21912 280 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 RPL22P35268 128 aaKnown RBP13.23□□□□□ -0.29
CKAP2-202ENST00000378034 ETV3P41162 512 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms