RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	FBP2	O00757	339 aa		11.71	□□□□□ -0.53
LMO7-204	ENST00000377499	ZNF197	O14709	1029 aa		11.71	□□□□□ -0.53
LMO7-204	ENST00000377499	MT-CO1	P00395	513 aa		11.71	□□□□□ -0.53
LMO7-204	ENST00000377499	GM2A	P17900	193 aa		11.71	□□□□□ -0.53
LMO7-204	ENST00000377499	RCVRN	P35243	200 aa		11.71	□□□□□ -0.53
LMO7-204	ENST00000377499	RGR	P47804	291 aa		11.71	□□□□□ -0.53
LMO7-204	ENST00000377499	SLC1A5	Q15758	541 aa		11.71	□□□□□ -0.53
LMO7-204	ENST00000377499	SIRPB2	Q5JXA9	342 aa		11.71	□□□□□ -0.53
LMO7-204	ENST00000377499	TMTC4	Q5T4D3	741 aa		11.71	□□□□□ -0.53
LMO7-204	ENST00000377499	SATL1	Q86VE3	508 aa		11.71	□□□□□ -0.53
LMO7-204	ENST00000377499	TMEM25	Q86YD3	366 aa		11.71	□□□□□ -0.53
LMO7-204	ENST00000377499	GABPB2	Q8TAK5	448 aa	Predicted RBP	11.71	□□□□□ -0.53
LMO7-204	ENST00000377499	PPP2R3C	Q969Q6	453 aa		11.71	□□□□□ -0.53
LMO7-204	ENST00000377499	ALKBH8	Q96BT7	664 aa	Known RBP	11.71	□□□□□ -0.53
LMO7-204	ENST00000377499	CIPC	Q9C0C6	399 aa		11.71	□□□□□ -0.53
LMO7-204	ENST00000377499	PALMD	Q9NP74	551 aa		11.71	□□□□□ -0.53
LMO7-204	ENST00000377499	HACD3	Q9P035	362 aa		11.71	□□□□□ -0.53
LMO7-204	ENST00000377499	SLC17A7	Q9P2U7	560 aa		11.71	□□□□□ -0.53
LMO7-204	ENST00000377499	VPS51	Q9UID3	782 aa		11.71	□□□□□ -0.53
LMO7-204	ENST00000377499	HAO1	Q9UJM8	370 aa		11.71	□□□□□ -0.53
LMO7-204	ENST00000377499	TLK1	Q9UKI8	766 aa		11.71	□□□□□ -0.53
LMO7-204	ENST00000377499	ACTL7B	Q9Y614	415 aa		11.71	□□□□□ -0.53
LMO7-204	ENST00000377499	PATJ	Q8NI35	1801 aa		11.71	□□□□□ -0.53
LMO7-204	ENST00000377499	TPP1	O14773	563 aa		11.71	□□□□□ -0.54
LMO7-204	ENST00000377499	INSIG1	O15503	277 aa		11.71	□□□□□ -0.54
LMO7-204	ENST00000377499	LYN	P07948	512 aa		11.71	□□□□□ -0.54
LMO7-204	ENST00000377499	PML	P29590	882 aa		11.71	□□□□□ -0.54
LMO7-204	ENST00000377499	USP10	Q14694	798 aa	Known RBP	11.71	□□□□□ -0.54
LMO7-204	ENST00000377499	PDPK2P	Q6A1A2	396 aa		11.71	□□□□□ -0.54
LMO7-204	ENST00000377499	CXorf57	Q6NSI4	855 aa	Known RBP	11.71	□□□□□ -0.54
LMO7-204	ENST00000377499	KLHL35	Q6PF15	583 aa		11.71	□□□□□ -0.54
LMO7-204	ENST00000377499	CMC1	Q7Z7K0	106 aa		11.71	□□□□□ -0.54
LMO7-204	ENST00000377499	BPHL	Q86WA6	291 aa	Predicted RBP	11.71	□□□□□ -0.54
LMO7-204	ENST00000377499	MYO1H	Q8N1T3	1032 aa		11.71	□□□□□ -0.54
LMO7-204	ENST00000377499	CAB39L	Q9H9S4	337 aa		11.71	□□□□□ -0.54
LMO7-204	ENST00000377499	MOCS1	Q9NZB8	636 aa		11.71	□□□□□ -0.54
LMO7-204	ENST00000377499	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	11.71	□□□□□ -0.54
LMO7-204	ENST00000377499	KIAA1522	Q9P206	1035 aa	Predicted RBP	11.71	□□□□□ -0.54
LMO7-204	ENST00000377499	STOML1	Q9UBI4	398 aa		11.71	□□□□□ -0.54
LMO7-204	ENST00000377499	TCAF1	Q9Y4C2	921 aa		11.71	□□□□□ -0.54
LMO7-204	ENST00000377499	PCDHB9	Q9Y5E1	797 aa		11.71	□□□□□ -0.54
LMO7-204	ENST00000377499	FGF19	O95750	216 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	PEX11B	O96011	259 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	SLC7A9	P82251	487 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	CAMK1	Q14012	370 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	PTPRCAP	Q14761	206 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	FAM209A	Q5JX71	171 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	C16orf46	Q6P387	395 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	RANBP10	Q6VN20	620 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	DENND6A	Q8IWF6	608 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	PNPLA1	Q8N8W4	532 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	ITFG1	Q8TB96	612 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	ADAMTS19	Q8TE59	1207 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	USP13	Q92995	863 aa	Predicted RBP	11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	SCYL1	Q96KG9	808 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	PITPNM3	Q9BZ71	974 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	PRKD2	Q9BZL6	878 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	PLAC1	Q9HBJ0	212 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	FETUB	Q9UGM5	382 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	EVL	Q9UI08	416 aa	Predicted RBP	11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	CLEC4E	Q9ULY5	219 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	KCTD3	Q9Y597	815 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499		A6NL46	340 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	NOTO	A8MTQ0	251 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	PRAMEF12	O95522	483 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	CEBPB	P17676	345 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	VHL	P40337	213 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	NEK3	P51956	506 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	LDB1	Q86U70	411 aa	Predicted RBP	11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	GIPC3	Q8TF64	312 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	HDAC10	Q969S8	669 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	FAM136A	Q96C01	138 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	MTBP	Q96DY7	904 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	ZSWIM3	Q96MP5	696 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	ZNF599	Q96NL3	588 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	CPNE1	Q99829	537 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	UNK	Q9C0B0	810 aa	Known RBP	11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	ZNF212	Q9UDV6	495 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	RAI2	Q9Y5P3	530 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499		H3BNC9	293 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	ZWINT	O95229	277 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	CTPS1	P17812	591 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	GK	P32189	559 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	CD70	P32970	193 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	VIPR2	P41587	438 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	LMAN2	Q12907	356 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	LY6G5C	Q5SRR4	150 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	KDELC1	Q6UW63	502 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	HTR3D	Q70Z44	454 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	ARRDC2	Q8TBH0	407 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	PSKH2	Q96QS6	385 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	PBX4	Q9BYU1	374 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	TBC1D30	Q9Y2I9	924 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	ARL5A	Q9Y689	179 aa		11.7	□□□□□ -0.54
LMO7-204	ENST00000377499	COL4A6	Q14031	1691 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	ZBTB11	O95625	1053 aa	Predicted RBP	11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	BAG2	O95816	211 aa		11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	TOP3B	O95985	862 aa	Known RBP	11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	HNRNPA1	P09651	372 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
LMO7-204	ENST00000377499	SH3BGR	P55822	239 aa	Predicted RBP	11.69	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms