RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 TIMMDC1Q9NPL8 285 aa13.25□□□□□ -0.29
ACTN1-202ENST00000376839 FLRT1Q9NZU1 646 aa13.25□□□□□ -0.29
ACTN1-202ENST00000376839 THEGQ9P2T0 379 aa13.25□□□□□ -0.29
ACTN1-202ENST00000376839 ST3GAL5Q9UNP4 418 aa13.25□□□□□ -0.29
ACTN1-202ENST00000376839 AURKCQ9UQB9 309 aa13.25□□□□□ -0.29
ACTN1-202ENST00000376839 DNAJC15Q9Y5T4 150 aa13.25□□□□□ -0.29
ACTN1-202ENST00000376839 CROCCQ5TZA2 2017 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 FAM155AB1AL88 458 aaPredicted RBP13.24□□□□□ -0.29
ACTN1-202ENST00000376839 TPST1O60507 370 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 S1PR4O95977 384 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 CAPN3P20807 821 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 ACADVLP49748 655 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 STX1BP61266 288 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 PLOD1Q02809 727 aaPredicted RBP13.24□□□□□ -0.29
ACTN1-202ENST00000376839 CAPRIN1Q14444 709 aaKnown RBP13.24□□□□□ -0.29
ACTN1-202ENST00000376839 GRB7Q14451 532 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 MAP7D1Q3KQU3 841 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 PPP4R4Q6NUP7 873 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 AGMOQ6ZNB7 445 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 SCD5Q86SK9 330 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 RYBPQ8N488 228 aaPredicted RBP13.24□□□□□ -0.29
ACTN1-202ENST00000376839 L3HYPDHQ96EM0 354 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 IMP4Q96G21 291 aaKnown RBP13.24□□□□□ -0.29
ACTN1-202ENST00000376839 PKMYT1Q99640 499 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 GPATCH1Q9BRR8 931 aaKnown RBP13.24□□□□□ -0.29
ACTN1-202ENST00000376839 UPF3AQ9H1J1 476 aaKnown RBP13.24□□□□□ -0.29
ACTN1-202ENST00000376839 ARNT2Q9HBZ2 717 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 POLR3BQ9NW08 1133 aaPredicted RBP13.24□□□□□ -0.29
ACTN1-202ENST00000376839 B3GAT3O94766 335 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 MMP2P08253 660 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 CTSHP09668 335 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 BMP2P12643 396 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 CDK9P50750 372 aaKnown RBP13.24□□□□□ -0.29
ACTN1-202ENST00000376839 ATP4BP51164 291 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 SLC5A3P53794 718 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 SLC10A7Q0GE19 358 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 SPPL2CQ8IUH8 684 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 CBR4Q8N4T8 237 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 TFAP2CQ92754 450 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 NSUN5Q96P11 429 aaKnown RBP13.24□□□□□ -0.29
ACTN1-202ENST00000376839 KCNA7Q96RP8 456 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 TCF12Q99081 682 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 TRMOQ9BU70 441 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 SMOC2Q9H3U7 446 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 ZNF408Q9H9D4 720 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 NMUR1Q9HB89 426 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 ARMC1Q9NVT9 282 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 DOCK3Q8IZD9 2030 aa13.24□□□□□ -0.29
ACTN1-202ENST00000376839 A0A0J9YVX5 310 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 FXYD1O00168 92 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 PIP5K1BO14986 540 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 CDK14O94921 469 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 HAPLN1P10915 354 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-202ENST00000376839 HSPA8P11142 646 aaKnown RBP13.23□□□□□ -0.29
ACTN1-202ENST00000376839 ODC1P11926 461 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 PTPRCAPQ14761 206 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 TBCELQ5QJ74 424 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 PTGR2Q8N8N7 351 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-202ENST00000376839 ROPN1LQ96C74 230 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 PPP1R2P1Q96PQ5 205 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 ACBD6Q9BR61 282 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 RGS18Q9NS28 235 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 SMOXQ9NWM0 555 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 IRAK4Q9NWZ3 460 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 OSER1Q9NX31 292 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 GJB3O75712 270 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 POMCP01189 267 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 GALK1P51570 392 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 HERVK_113P63132 956 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 MYBPC3Q14896 1274 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 PIK3R6Q5UE93 754 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 ZNF549Q6P9A3 640 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 SLC15A3Q8IY34 581 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 SCML4Q8N228 414 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 PCYOX1LQ8NBM8 494 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 PABPC5Q96DU9 382 aaKnown RBP13.23□□□□□ -0.29
ACTN1-202ENST00000376839 HMCESQ96FZ2 354 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 ERVK-6Q9BXR3 956 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 CLK4Q9HAZ1 481 aaKnown RBP13.23□□□□□ -0.29
ACTN1-202ENST00000376839 ABCC13Q9NSE7 274 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 CCM2LQ9NUG4 571 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-202ENST00000376839 CMTM6Q9NX76 183 aa13.23□□□□□ -0.29
ACTN1-202ENST00000376839 A0A1B0GTL3 188 aa13.22□□□□□ -0.29
ACTN1-202ENST00000376839 F8W810 466 aa13.22□□□□□ -0.29
ACTN1-202ENST00000376839 UBXN8O00124 270 aa13.22□□□□□ -0.29
ACTN1-202ENST00000376839 STAMBPO95630 424 aa13.22□□□□□ -0.29
ACTN1-202ENST00000376839 ZNF865P0CJ78 1059 aaPredicted RBP13.22□□□□□ -0.29
ACTN1-202ENST00000376839 OXTRP30559 389 aa13.22□□□□□ -0.29
ACTN1-202ENST00000376839 TIAL1Q01085 375 aaKnown RBP eCLIP13.22□□□□□ -0.294e-6■■■□□ 18.3
ACTN1-202ENST00000376839 OR4D1Q15615 310 aa13.22□□□□□ -0.29
ACTN1-202ENST00000376839 GEN1Q17RS7 908 aa13.22□□□□□ -0.29
ACTN1-202ENST00000376839 PHYKPLQ8IUZ5 450 aa13.22□□□□□ -0.29
ACTN1-202ENST00000376839 ERI1Q8IV48 349 aaKnown RBP13.22□□□□□ -0.29
ACTN1-202ENST00000376839 CLYBLQ8N0X4 340 aa13.22□□□□□ -0.29
ACTN1-202ENST00000376839 TWIST2Q8WVJ9 160 aa13.22□□□□□ -0.29
ACTN1-202ENST00000376839 MFSD1Q9H3U5 465 aa13.22□□□□□ -0.29
ACTN1-202ENST00000376839 TUBB1Q9H4B7 451 aa13.22□□□□□ -0.29
ACTN1-202ENST00000376839 MID1IP1Q9NPA3 183 aa13.22□□□□□ -0.29
ACTN1-202ENST00000376839 ABCD2Q9UBJ2 740 aa13.22□□□□□ -0.29
ACTN1-202ENST00000376839 DHRS12A0PJE2 317 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms