RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 CFAP36Q96G28 342 aa22.94■■□□□ 1.26
HLA-C-202ENST00000376237 ITM2CQ9NQX7 267 aa22.94■■□□□ 1.26
HLA-C-202ENST00000376237 TREX1Q9NSU2 369 aa22.94■■□□□ 1.26
HLA-C-202ENST00000376237 NLE1Q9NVX2 485 aaPredicted RBP22.94■■□□□ 1.26
HLA-C-202ENST00000376237 IL17CQ9P0M4 197 aa22.94■■□□□ 1.26
HLA-C-202ENST00000376237 FADS3Q9Y5Q0 445 aa22.94■■□□□ 1.26
HLA-C-202ENST00000376237 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.94■■□□□ 1.26
HLA-C-202ENST00000376237 PLK4O00444 970 aa22.93■■□□□ 1.26
HLA-C-202ENST00000376237 RIPK2O43353 540 aa22.93■■□□□ 1.26
HLA-C-202ENST00000376237 APBB3O95704 486 aa22.93■■□□□ 1.26
HLA-C-202ENST00000376237 PDGFBP01127 241 aaPredicted RBP22.93■■□□□ 1.26
HLA-C-202ENST00000376237 LHCGRP22888 699 aa22.93■■□□□ 1.26
HLA-C-202ENST00000376237 NMBRP28336 390 aa22.93■■□□□ 1.26
HLA-C-202ENST00000376237 ZNF140P52738 457 aaPredicted RBP22.93■■□□□ 1.26
HLA-C-202ENST00000376237 RALGDSQ12967 914 aa22.93■■□□□ 1.26
HLA-C-202ENST00000376237 FRG1Q14331 258 aaKnown RBP22.93■■□□□ 1.26
HLA-C-202ENST00000376237 ZDHHC20Q5W0Z9 365 aa22.93■■□□□ 1.26
HLA-C-202ENST00000376237 FBXO38Q6PIJ6 1188 aa22.93■■□□□ 1.26
HLA-C-202ENST00000376237 TSPAN33Q86UF1 283 aa22.93■■□□□ 1.26
HLA-C-202ENST00000376237 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.93■■□□□ 1.26
HLA-C-202ENST00000376237 GSDMBQ8TAX9 411 aa22.93■■□□□ 1.26
HLA-C-202ENST00000376237 ZNF778Q96MU6 729 aa22.93■■□□□ 1.26
HLA-C-202ENST00000376237 KDM4CQ9H3R0 1056 aa22.93■■□□□ 1.26
HLA-C-202ENST00000376237 SERGEFQ9UGK8 458 aa22.93■■□□□ 1.26
HLA-C-202ENST00000376237 ZCWPW2A0A1B0GU75 182 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 A8MX80 341 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 DYNC1I1O14576 645 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 ABHD2P08910 425 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 SSTR1P30872 391 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 PTSQ03393 145 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 CNGA3Q16281 694 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 KIAA0930Q6ICG6 404 aaPredicted RBP22.92■■□□□ 1.26
HLA-C-202ENST00000376237 ANO7Q6IWH7 933 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 ESRP1Q6NXG1 681 aaKnown RBP22.92■■□□□ 1.26
HLA-C-202ENST00000376237 LIPIQ6XZB0 460 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 RASSF3Q86WH2 238 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 CBARPQ8N350 705 aaPredicted RBP22.92■■□□□ 1.26
HLA-C-202ENST00000376237 OR4K2Q8NGD2 314 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 UBLCP1Q8WVY7 318 aaPredicted RBP22.92■■□□□ 1.26
HLA-C-202ENST00000376237 HHIPQ96QV1 700 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 VPS37BQ9H9H4 285 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 RAD18Q9NS91 495 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 C2orf42Q9NWW7 574 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 USP36Q9P275 1121 aaKnown RBP22.92■■□□□ 1.26
HLA-C-202ENST00000376237 RGSL1A5PLK6 1076 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 SPINT1O43278 529 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 PLRG1O43660 514 aaKnown RBP22.92■■□□□ 1.26
HLA-C-202ENST00000376237 ZNF217O75362 1048 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 ACSL3O95573 720 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 IGLV3-19P01714 112 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 ELFN1P0C7U0 828 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 TPMTP51580 245 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 STC1P52823 247 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 PTPN5P54829 565 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 GPX6P59796 221 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 NEK5Q6P3R8 708 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 ZNF449Q6P9G9 518 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 CES3Q6UWW8 571 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 EID2BQ96D98 161 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 FCRL3Q96P31 734 aaPredicted RBP22.92■■□□□ 1.26
HLA-C-202ENST00000376237 FUT8Q9BYC5 575 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 CDH19Q9H159 772 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 PLAC1Q9HBJ0 212 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 PKD2L2Q9NZM6 624 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 KCTD3Q9Y597 815 aa22.92■■□□□ 1.26
HLA-C-202ENST00000376237 H7C0S8 307 aa22.91■■□□□ 1.26
HLA-C-202ENST00000376237 PI15O43692 258 aa22.91■■□□□ 1.26
HLA-C-202ENST00000376237 RPP40O75818 363 aaKnown RBP22.91■■□□□ 1.26
HLA-C-202ENST00000376237 SLC4A1P02730 911 aa22.91■■□□□ 1.26
HLA-C-202ENST00000376237 STX2P32856 288 aa22.91■■□□□ 1.26
HLA-C-202ENST00000376237 HSD17B3P37058 310 aa22.91■■□□□ 1.26
HLA-C-202ENST00000376237 TAS2R38P59533 333 aa22.91■■□□□ 1.26
HLA-C-202ENST00000376237 SEMG2Q02383 582 aa22.91■■□□□ 1.26
HLA-C-202ENST00000376237 OR13C4Q8NGS5 318 aa22.91■■□□□ 1.26
HLA-C-202ENST00000376237 OR13J1Q8NGT2 312 aa22.91■■□□□ 1.26
HLA-C-202ENST00000376237 OR14C36Q8NHC7 312 aa22.91■■□□□ 1.26
HLA-C-202ENST00000376237 CXorf40AQ8TE69 158 aa22.91■■□□□ 1.26
HLA-C-202ENST00000376237 CDKN2AIPNLQ96HQ2 116 aa22.91■■□□□ 1.26
HLA-C-202ENST00000376237 DNAJC1Q96KC8 554 aaKnown RBP22.91■■□□□ 1.26
HLA-C-202ENST00000376237 TRIM56Q9BRZ2 755 aaKnown RBP22.91■■□□□ 1.26
HLA-C-202ENST00000376237 SGK2Q9HBY8 427 aa22.91■■□□□ 1.26
HLA-C-202ENST00000376237 KCTD5Q9NXV2 234 aa22.91■■□□□ 1.26
HLA-C-202ENST00000376237 MOCS1Q9NZB8 636 aa22.91■■□□□ 1.26
HLA-C-202ENST00000376237 SLC2A6Q9UGQ3 507 aa22.91■■□□□ 1.26
HLA-C-202ENST00000376237 EBF1Q9UH73 591 aa22.91■■□□□ 1.26
HLA-C-202ENST00000376237 ITM2BQ9Y287 266 aa22.91■■□□□ 1.26
HLA-C-202ENST00000376237 A0A087WUV0 522 aaPredicted RBP22.9■■□□□ 1.26
HLA-C-202ENST00000376237 CCDC78A2IDD5 438 aa22.9■■□□□ 1.26
HLA-C-202ENST00000376237 BUD23O43709 281 aaKnown RBP22.9■■□□□ 1.26
HLA-C-202ENST00000376237 OXTRP30559 389 aa22.9■■□□□ 1.26
HLA-C-202ENST00000376237 LIG3P49916 1009 aa22.9■■□□□ 1.26
HLA-C-202ENST00000376237 PRAMEP78395 509 aa22.9■■□□□ 1.26
HLA-C-202ENST00000376237 SLC29A2Q14542 456 aa22.9■■□□□ 1.26
HLA-C-202ENST00000376237 LONRF1Q17RB8 773 aa22.9■■□□□ 1.26
HLA-C-202ENST00000376237 PDPK2PQ6A1A2 396 aa22.9■■□□□ 1.26
HLA-C-202ENST00000376237 GABPB2Q8TAK5 448 aaPredicted RBP22.9■■□□□ 1.26
HLA-C-202ENST00000376237 ANKRD7Q92527 254 aa22.9■■□□□ 1.26
HLA-C-202ENST00000376237 BTBD1Q9H0C5 482 aa22.9■■□□□ 1.26
HLA-C-202ENST00000376237 PREBQ9HCU5 417 aa22.9■■□□□ 1.26
HLA-C-202ENST00000376237 APPL1Q9UKG1 709 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms