RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 NXF3Q9H4D5 531 aaKnown RBP9.84□□□□□ -0.83
SPEN-201ENST00000375759 TMEM134Q9H6X4 195 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 PEX16Q9Y5Y5 336 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 KCNE2Q9Y6J6 123 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 PCSK2P16519 638 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 CDH5P33151 784 aaPredicted RBP9.84□□□□□ -0.83
SPEN-201ENST00000375759 CBX3Q13185 183 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 ITGA7Q13683 1181 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 BBS12Q6ZW61 710 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 TNFAIP8L1Q8WVP5 186 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 TMCO6Q96DC7 493 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 HSFY1Q96LI6 401 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 PNMA5Q96PV4 448 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 OXCT2Q9BYC2 517 aaPredicted RBP9.84□□□□□ -0.83
SPEN-201ENST00000375759 C12orf4Q9NQ89 552 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.84□□□□□ -0.831e-6■■□□□ 11.5
SPEN-201ENST00000375759 DNAJC28Q9NX36 388 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 MCIDASD6RGH6 385 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 FAM86B1E9PN63 330 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 BPGMP07738 259 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 ATP5C1P36542 298 aaKnown RBP9.84□□□□□ -0.83
SPEN-201ENST00000375759 RPL19P84098 196 aaKnown RBP9.84□□□□□ -0.83
SPEN-201ENST00000375759 RGS1Q08116 209 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 GRB14Q14449 540 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 LIN52Q52LA3 116 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 ZYG11BQ9C0D3 744 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 GIN1Q9NXP7 522 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 PTTG2Q9NZH5 202 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 H3BNH8 94 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 ALOX15BO15296 676 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 KCNQ2O43526 872 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 TAPT1Q6NXT6 567 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 NPNTQ6UXI9 565 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 MINDY2Q8NBR6 621 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 MECRQ9BV79 373 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 KCNN2Q9H2S1 579 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 GNEQ9Y223 722 aaKnown RBP9.84□□□□□ -0.83
SPEN-201ENST00000375759 OR10H1Q9Y4A9 318 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 E7ENX8 843 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 HNRNPLP14866 589 aaKnown RBP eCLIP9.84□□□□□ -0.83
SPEN-201ENST00000375759 PRDX6P30041 224 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 FAM183BPQ6ZVS7 135 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 PGAM4Q8N0Y7 254 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 MRPL9Q9BYD2 267 aaKnown RBP9.84□□□□□ -0.83
SPEN-201ENST00000375759 UPB1Q9UBR1 384 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 FBXO10Q9UK96 956 aa9.84□□□□□ -0.83
SPEN-201ENST00000375759 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.84□□□□□ -0.833e-6■■■■□ 24
SPEN-201ENST00000375759 CLDN25C9JDP6 229 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 ORC5O43913 435 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 ADAM17P78536 824 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 CPTPQ5TA50 214 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 CNTD1Q8N815 330 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 OR8H1Q8NGG4 311 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 EZH1Q92800 747 aaPredicted RBP9.83□□□□□ -0.84
SPEN-201ENST00000375759 RFKQ969G6 155 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 C18orf25Q96B23 403 aaPredicted RBP9.83□□□□□ -0.84
SPEN-201ENST00000375759 PCDHGB3Q9Y5G1 929 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 hCG_1818297A0A087WSY0 165 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 POMCP01189 267 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 BDNFP23560 247 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 C6orf52Q5T4I8 152 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 DGKBQ9Y6T7 804 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 TULP3O75386 442 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 TOMM20Q15388 145 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 C15orf59Q2T9L4 293 aaPredicted RBP9.83□□□□□ -0.84
SPEN-201ENST00000375759 LACTB2Q53H82 288 aaPredicted RBP9.83□□□□□ -0.84
SPEN-201ENST00000375759 PARP8Q8N3A8 854 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 FAM129BQ96TA1 746 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 TTYH1Q9H313 450 aaPredicted RBP9.83□□□□□ -0.84
SPEN-201ENST00000375759 RHOJQ9H4E5 214 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 INTS7Q9NVH2 962 aaKnown RBP9.83□□□□□ -0.84
SPEN-201ENST00000375759 ZNF180Q9UJW8 692 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 BTRCQ9Y297 605 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 RBM7Q9Y580 266 aaKnown RBP9.83□□□□□ -0.84
SPEN-201ENST00000375759 PCP4L1A6NKN8 68 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 KPNA3O00505 521 aaPredicted RBP9.83□□□□□ -0.84
SPEN-201ENST00000375759 ITIH1P19827 911 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 SOX10P56693 466 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 USP4Q13107 963 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 PABPC1LQ4VXU2 614 aaKnown RBP9.83□□□□□ -0.84
SPEN-201ENST00000375759 FNDC3BQ53EP0 1204 aaKnown RBP9.83□□□□□ -0.84
SPEN-201ENST00000375759 RD3Q7Z3Z2 195 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 CPSF7Q8N684 471 aaKnown RBP9.83□□□□□ -0.84
SPEN-201ENST00000375759 TAS2R14Q9NYV8 317 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 TBC1D24Q9ULP9 559 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 DIP2AQ14689 1571 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 METTL21EPA6NDL7 271 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 TPD52L2O43399 206 aaKnown RBP9.83□□□□□ -0.84
SPEN-201ENST00000375759 CDC40O60508 579 aaKnown RBP eCLIP9.83□□□□□ -0.84
SPEN-201ENST00000375759 SCGNO76038 276 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 CHKAP35790 457 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 SEPHS1P49903 392 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 ARPC4P59998 168 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 KCTD4Q8WVF5 259 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 PORCNQ9H237 461 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 SEMA3GQ9NS98 782 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 XPR1Q9UBH6 696 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 GULP1Q9UBP9 304 aa9.83□□□□□ -0.84
SPEN-201ENST00000375759 PPRC1Q5VV67 1664 aaKnown RBP9.83□□□□□ -0.84
SPEN-201ENST00000375759 LPOP22079 712 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms