RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 TBATAQ96M53 351 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 UHRF1Q96T88 793 aaPredicted RBP14.57□□□□□ -0.08
MSH5-201ENST00000375703 ZYG11BQ9C0D3 744 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 UPF3AQ9H1J1 476 aaKnown RBP14.57□□□□□ -0.08
MSH5-201ENST00000375703 UXTQ9UBK9 157 aaPredicted RBP14.57□□□□□ -0.08
MSH5-201ENST00000375703 PADI3Q9ULW8 664 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 TLR6Q9Y2C9 796 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 F8W810 466 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 H3BSA7 217 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 MGEA5O60502 916 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 TIPRLO75663 272 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 CNTN5O94779 1100 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 RHOQP17081 205 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 CD52P31358 61 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 GRIA3P42263 894 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 NME5P56597 212 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 CACNB2Q08289 660 aaPredicted RBP14.57□□□□□ -0.08
MSH5-201ENST00000375703 TUSC3Q13454 348 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 GEN1Q17RS7 908 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 TMEM259Q4ZIN3 620 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 CXCL17Q6UXB2 119 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 ZBTB49Q6ZSB9 765 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 CANT1Q8WVQ1 401 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 DNAJC1Q96KC8 554 aaKnown RBP14.57□□□□□ -0.08
MSH5-201ENST00000375703 HAUS8Q9BT25 410 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 OCEL1Q9H607 264 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 IL1RL2Q9HB29 575 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 DDX18Q9NVP1 670 aaKnown RBP14.57□□□□□ -0.08
MSH5-201ENST00000375703 GMPR2Q9P2T1 348 aaKnown RBP14.57□□□□□ -0.08
MSH5-201ENST00000375703 CNOT6Q9ULM6 557 aaKnown RBP14.57□□□□□ -0.08
MSH5-201ENST00000375703 DNAJC15Q9Y5T4 150 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 NYNRINQ9P2P1 1898 aaKnown RBP14.56□□□□□ -0.08
MSH5-201ENST00000375703 A0A0J9YYE9 177 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 A0A1B0GTW7 788 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 ZNF839A8K0R7 811 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 SLC2A3P11169 496 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 CD1DP15813 335 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 TBX4P57082 545 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 YWHAHQ04917 246 aaPredicted RBP14.56□□□□□ -0.08
MSH5-201ENST00000375703 ALFQ53S48 1182 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 SDHAF4Q5VUM1 108 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 KRT80Q6KB66 452 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 BORAQ6PGQ7 559 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 MON1AQ86VX9 555 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 SUSD3Q96L08 255 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 CCT7Q99832 543 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 MTG1Q9BT17 334 aaPredicted RBP14.56□□□□□ -0.08
MSH5-201ENST00000375703 CAAP1Q9H8G2 361 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 THEGQ9P2T0 379 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 ATXN10Q9UBB4 475 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 PPP6CO00743 305 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 TNPO2O14787 897 aaKnown RBP14.56□□□□□ -0.08
MSH5-201ENST00000375703 AKAP10O43572 662 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 LDB2O43679 373 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 H6PDO95479 791 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 GLP2RO95838 553 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 CKMT2P17540 419 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 ETFBP38117 255 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 USP46P62068 366 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 SLC39A12Q504Y0 691 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 MS4A13Q5J8X5 152 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 IL31Q6EBC2 164 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 RAB44Q7Z6P3 723 aaPredicted RBP14.56□□□□□ -0.08
MSH5-201ENST00000375703 RETREG3Q86VR2 466 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 CARM1Q86X55 608 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 PTGR2Q8N8N7 351 aaPredicted RBP14.56□□□□□ -0.08
MSH5-201ENST00000375703 OR2T34Q8NGX1 318 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 OR2T3Q8NH03 318 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 FATE1Q969F0 183 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 SLC39A13Q96H72 371 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 LRCH3Q96II8 777 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 MID1IP1Q9NPA3 183 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 PRDM5Q9NQX1 630 aaPredicted RBP14.56□□□□□ -0.08
MSH5-201ENST00000375703 TMEM248Q9NWD8 314 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 ABI2Q9NYB9 513 aaPredicted RBP14.56□□□□□ -0.08
MSH5-201ENST00000375703 MAP10Q9P2G4 905 aa14.56□□□□□ -0.08
MSH5-201ENST00000375703 BBIP1A8MTZ0 92 aa14.55□□□□□ -0.08
MSH5-201ENST00000375703 NR5A2O00482 541 aa14.55□□□□□ -0.08
MSH5-201ENST00000375703 CDK14O94921 469 aa14.55□□□□□ -0.08
MSH5-201ENST00000375703 SIX3O95343 332 aaPredicted RBP14.55□□□□□ -0.08
MSH5-201ENST00000375703 FGF4P08620 206 aa14.55□□□□□ -0.08
MSH5-201ENST00000375703 NELFEP18615 380 aaKnown RBP14.55□□□□□ -0.08
MSH5-201ENST00000375703 NFKB2Q00653 900 aa14.55□□□□□ -0.08
MSH5-201ENST00000375703 PRKCQQ04759 706 aa14.55□□□□□ -0.08
MSH5-201ENST00000375703 ZNF549Q6P9A3 640 aa14.55□□□□□ -0.08
MSH5-201ENST00000375703 ZNF683Q8IZ20 524 aa14.55□□□□□ -0.08
MSH5-201ENST00000375703 ASB2Q96Q27 587 aa14.55□□□□□ -0.08
MSH5-201ENST00000375703 HOPXQ9BPY8 73 aaPredicted RBP14.55□□□□□ -0.08
MSH5-201ENST00000375703 NDUFAF1Q9Y375 327 aa14.55□□□□□ -0.08
MSH5-201ENST00000375703 A0A0U1RQF3 1178 aa14.55□□□□□ -0.08
MSH5-201ENST00000375703 LOC285095A0A1B0GVY8 99 aa14.55□□□□□ -0.08
MSH5-201ENST00000375703 CD3EAPO15446 510 aaKnown RBP14.55□□□□□ -0.08
MSH5-201ENST00000375703 HTRA2O43464 458 aaPredicted RBP14.55□□□□□ -0.08
MSH5-201ENST00000375703 FDXRP22570 491 aa14.55□□□□□ -0.08
MSH5-201ENST00000375703 PTPRCAPQ14761 206 aa14.55□□□□□ -0.08
MSH5-201ENST00000375703 PFKFB4Q16877 469 aa14.55□□□□□ -0.08
MSH5-201ENST00000375703 VPS26BQ4G0F5 336 aa14.55□□□□□ -0.08
MSH5-201ENST00000375703 PGBD5Q8N414 524 aa14.55□□□□□ -0.08
MSH5-201ENST00000375703 TEX26Q8N6G2 289 aa14.55□□□□□ -0.08
MSH5-201ENST00000375703 ANKFN1Q8N957 763 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms