RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 CTNND2Q9UQB3 1225 aa17.47■□□□□ 0.39
H2AFX-201ENST00000375167 PCDHGA6Q9Y5G7 932 aa17.47■□□□□ 0.39
H2AFX-201ENST00000375167 PPM1DO15297 605 aa17.46■□□□□ 0.39
H2AFX-201ENST00000375167 CCL11P51671 97 aa17.46■□□□□ 0.39
H2AFX-201ENST00000375167 CHAF1BQ13112 559 aa17.46■□□□□ 0.39
H2AFX-201ENST00000375167 NME3Q13232 169 aa17.46■□□□□ 0.39
H2AFX-201ENST00000375167 LRRC31Q6UY01 552 aa17.46■□□□□ 0.39
H2AFX-201ENST00000375167 ARHGAP22Q7Z5H3 698 aa17.46■□□□□ 0.39
H2AFX-201ENST00000375167 RHOT1Q8IXI2 618 aa17.46■□□□□ 0.39
H2AFX-201ENST00000375167 GALNT6Q8NCL4 622 aa17.46■□□□□ 0.39
H2AFX-201ENST00000375167 OR10G6Q8NH81 332 aa17.46■□□□□ 0.39
H2AFX-201ENST00000375167 PATE1Q8WXA2 126 aa17.46■□□□□ 0.39
H2AFX-201ENST00000375167 THAP4Q8WY91 577 aa17.46■□□□□ 0.39
H2AFX-201ENST00000375167 FUBP1Q96AE4 644 aaKnown RBP17.46■□□□□ 0.39
H2AFX-201ENST00000375167 PCDHB4Q9Y5E5 795 aa17.46■□□□□ 0.39
H2AFX-201ENST00000375167 PRSS38A1L453 326 aa17.45■□□□□ 0.38
H2AFX-201ENST00000375167 HOXB4P17483 251 aaPredicted RBP17.45■□□□□ 0.38
H2AFX-201ENST00000375167 SUOXP51687 545 aa17.45■□□□□ 0.38
H2AFX-201ENST00000375167 ITGA1P56199 1179 aa17.45■□□□□ 0.38
H2AFX-201ENST00000375167 CDK18Q07002 472 aa17.45■□□□□ 0.38
H2AFX-201ENST00000375167 PEX6Q13608 980 aa17.45■□□□□ 0.38
H2AFX-201ENST00000375167 DNASE1L3Q13609 305 aa17.45■□□□□ 0.38
H2AFX-201ENST00000375167 SKOR2Q2VWA4 1001 aaPredicted RBP17.45■□□□□ 0.38
H2AFX-201ENST00000375167 MYLK3Q32MK0 819 aa17.45■□□□□ 0.38
H2AFX-201ENST00000375167 SUDS3Q9H7L9 328 aaPredicted RBP17.45■□□□□ 0.38
H2AFX-201ENST00000375167 CARS2Q9HA77 564 aaKnown RBP17.45■□□□□ 0.38
H2AFX-201ENST00000375167 METTL14Q9HCE5 456 aaKnown RBP17.45■□□□□ 0.38
H2AFX-201ENST00000375167 MPP6Q9NZW5 540 aa17.45■□□□□ 0.38
H2AFX-201ENST00000375167 ARMCX3Q9UH62 379 aaPredicted RBP17.45■□□□□ 0.38
H2AFX-201ENST00000375167 RWDD2AQ9UIY3 292 aa17.45■□□□□ 0.38
H2AFX-201ENST00000375167 ACTL7AQ9Y615 435 aa17.45■□□□□ 0.38
H2AFX-201ENST00000375167 DOCK4Q8N1I0 1966 aa17.45■□□□□ 0.38
H2AFX-201ENST00000375167 NIPBLQ6KC79 2804 aaeCLIP17.45■□□□□ 0.38
H2AFX-201ENST00000375167 ZSCAN5CA6NGD5 496 aaPredicted RBP17.44■□□□□ 0.38
H2AFX-201ENST00000375167 E5RJQ4 531 aa17.44■□□□□ 0.38
H2AFX-201ENST00000375167 STX17P56962 302 aa17.44■□□□□ 0.38
H2AFX-201ENST00000375167 GEMIN4P57678 1058 aaKnown RBP17.44■□□□□ 0.38
H2AFX-201ENST00000375167 AGERQ15109 404 aa17.44■□□□□ 0.38
H2AFX-201ENST00000375167 DEFB106AQ8N104 65 aa17.44■□□□□ 0.38
H2AFX-201ENST00000375167 PLA2G15Q8NCC3 412 aa17.44■□□□□ 0.38
H2AFX-201ENST00000375167 RANBP9Q96S59 729 aa17.44■□□□□ 0.38
H2AFX-201ENST00000375167 ING2Q9H160 280 aa17.44■□□□□ 0.38
H2AFX-201ENST00000375167 LATS2Q9NRM7 1088 aa17.44■□□□□ 0.38
H2AFX-201ENST00000375167 CXorf51AA0A1B0GTR3 108 aa17.43■□□□□ 0.38
H2AFX-201ENST00000375167 ARGFXA6NJG6 315 aa17.43■□□□□ 0.38
H2AFX-201ENST00000375167 LRRTM2O43300 516 aa17.43■□□□□ 0.38
H2AFX-201ENST00000375167 FGFR1OPO95684 399 aaKnown RBP17.43■□□□□ 0.38
H2AFX-201ENST00000375167 GNA14O95837 355 aa17.43■□□□□ 0.38
H2AFX-201ENST00000375167 CCNYL3P0C7X3 344 aa17.43■□□□□ 0.38
H2AFX-201ENST00000375167 ZNF28P17035 718 aa17.43■□□□□ 0.38
H2AFX-201ENST00000375167 GPD2P43304 727 aa17.43■□□□□ 0.38
H2AFX-201ENST00000375167 RAD51Q06609 339 aa17.43■□□□□ 0.38
H2AFX-201ENST00000375167 TAF5Q15542 800 aa17.43■□□□□ 0.38
H2AFX-201ENST00000375167 SLC30A9Q6PML9 568 aa17.43■□□□□ 0.38
H2AFX-201ENST00000375167 WDR74Q6RFH5 385 aaPredicted RBP17.43■□□□□ 0.38
H2AFX-201ENST00000375167 RBM43Q6ZSC3 357 aaKnown RBP17.43■□□□□ 0.38
H2AFX-201ENST00000375167 NRROSQ86YC3 692 aa17.43■□□□□ 0.38
H2AFX-201ENST00000375167 NAGSQ8N159 534 aa17.43■□□□□ 0.38
H2AFX-201ENST00000375167 ARHGEF2Q92974 986 aaKnown RBP17.43■□□□□ 0.38
H2AFX-201ENST00000375167 RNF31Q96EP0 1072 aa17.43■□□□□ 0.38
H2AFX-201ENST00000375167 SLC2A13Q96QE2 648 aa17.43■□□□□ 0.38
H2AFX-201ENST00000375167 ACTL8Q9H568 366 aa17.43■□□□□ 0.38
H2AFX-201ENST00000375167 PKDREJQ9NTG1 2253 aa17.42■□□□□ 0.38
H2AFX-201ENST00000375167 DRGXA6NNA5 263 aa17.42■□□□□ 0.38
H2AFX-201ENST00000375167 PDE2AO00408 941 aaPredicted RBP17.42■□□□□ 0.38
H2AFX-201ENST00000375167 ZG16O60844 167 aa17.42■□□□□ 0.38
H2AFX-201ENST00000375167 CALCAP01258 141 aa17.42■□□□□ 0.38
H2AFX-201ENST00000375167 HOXC4P09017 264 aaPredicted RBP17.42■□□□□ 0.38
H2AFX-201ENST00000375167 GARSP41250 739 aaKnown RBP17.42■□□□□ 0.38
H2AFX-201ENST00000375167 GNA12Q03113 381 aa17.42■□□□□ 0.38
H2AFX-201ENST00000375167 FOXM1Q08050 763 aa17.42■□□□□ 0.38
H2AFX-201ENST00000375167 LRMPQ12912 555 aa17.42■□□□□ 0.38
H2AFX-201ENST00000375167 UGT8Q16880 541 aa17.42■□□□□ 0.38
H2AFX-201ENST00000375167 TCERG1LQ5VWI1 586 aa17.42■□□□□ 0.38
H2AFX-201ENST00000375167 ZNF683Q8IZ20 524 aa17.42■□□□□ 0.38
H2AFX-201ENST00000375167 CISD2Q8N5K1 135 aaKnown RBP17.42■□□□□ 0.38
H2AFX-201ENST00000375167 RBMXL3Q8N7X1 1067 aaKnown RBP17.42■□□□□ 0.38
H2AFX-201ENST00000375167 STK32AQ8WU08 396 aa17.42■□□□□ 0.38
H2AFX-201ENST00000375167 VOPP1Q96AW1 172 aa17.42■□□□□ 0.38
H2AFX-201ENST00000375167 HMCESQ96FZ2 354 aa17.42■□□□□ 0.38
H2AFX-201ENST00000375167 GDAP1L1Q96MZ0 367 aa17.42■□□□□ 0.38
H2AFX-201ENST00000375167 SLC38A3Q99624 504 aa17.42■□□□□ 0.38
H2AFX-201ENST00000375167 WDR26Q9H7D7 661 aa17.42■□□□□ 0.38
H2AFX-201ENST00000375167 COQ4Q9Y3A0 265 aa17.42■□□□□ 0.38
H2AFX-201ENST00000375167 TACC2O95359 2948 aa17.42■□□□□ 0.38
H2AFX-201ENST00000375167 C21orf140B9A014 251 aa17.41■□□□□ 0.38
H2AFX-201ENST00000375167 MAP3K6O95382 1288 aa17.41■□□□□ 0.38
H2AFX-201ENST00000375167 CD160O95971 181 aa17.41■□□□□ 0.38
H2AFX-201ENST00000375167 GLI1P08151 1106 aa17.41■□□□□ 0.38
H2AFX-201ENST00000375167 AK4P27144 223 aaPredicted RBP17.41■□□□□ 0.38
H2AFX-201ENST00000375167 CLCN1P35523 988 aa17.41■□□□□ 0.38
H2AFX-201ENST00000375167 LIG3P49916 1009 aa17.41■□□□□ 0.38
H2AFX-201ENST00000375167 DPCR1Q3MIW9 517 aa17.41■□□□□ 0.38
H2AFX-201ENST00000375167 CCDC40Q4G0X9 1142 aa17.41■□□□□ 0.38
H2AFX-201ENST00000375167 CBWD6Q4V339 395 aa17.41■□□□□ 0.38
H2AFX-201ENST00000375167 DCAF17Q5H9S7 520 aaPredicted RBP17.41■□□□□ 0.38
H2AFX-201ENST00000375167 CBWD3Q5JTY5 395 aa17.41■□□□□ 0.38
H2AFX-201ENST00000375167 CBWD5Q5RIA9 395 aa17.41■□□□□ 0.38
H2AFX-201ENST00000375167 ATXN7L2Q5T6C5 722 aaPredicted RBP17.41■□□□□ 0.38
H2AFX-201ENST00000375167 ERAP2Q6P179 960 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms