RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 SOWAHAQ2M3V2 549 aa19.55■□□□□ 0.72
TGFBR1-201ENST00000374990 RELL1Q8IUW5 271 aa19.55■□□□□ 0.72
TGFBR1-201ENST00000374990 CDK20Q8IZL9 346 aa19.55■□□□□ 0.72
TGFBR1-201ENST00000374990 NPAS2Q99743 824 aa19.55■□□□□ 0.72
TGFBR1-201ENST00000374990 RNF208Q9H0X6 261 aa19.55■□□□□ 0.72
TGFBR1-201ENST00000374990 A8MUI8 341 aa19.55■□□□□ 0.72
TGFBR1-201ENST00000374990 A8MX80 341 aa19.55■□□□□ 0.72
TGFBR1-201ENST00000374990 LINC00032P0C843 101 aa19.55■□□□□ 0.72
TGFBR1-201ENST00000374990 DUSP4Q13115 394 aa19.55■□□□□ 0.72
TGFBR1-201ENST00000374990 SGCGQ13326 291 aa19.55■□□□□ 0.72
TGFBR1-201ENST00000374990 CA9Q16790 459 aa19.55■□□□□ 0.72
TGFBR1-201ENST00000374990 CDCA2Q69YH5 1023 aaPredicted RBP19.55■□□□□ 0.72
TGFBR1-201ENST00000374990 SCIMPQ6UWF3 145 aa19.55■□□□□ 0.72
TGFBR1-201ENST00000374990 CPSF7Q8N684 471 aaKnown RBP19.55■□□□□ 0.72
TGFBR1-201ENST00000374990 BTBD9Q96Q07 612 aa19.55■□□□□ 0.72
TGFBR1-201ENST00000374990 PALMDQ9NP74 551 aa19.55■□□□□ 0.72
TGFBR1-201ENST00000374990 ASAH2Q9NR71 780 aa19.55■□□□□ 0.72
TGFBR1-201ENST00000374990 CNTN6Q9UQ52 1028 aa19.55■□□□□ 0.72
TGFBR1-201ENST00000374990 JAG1P78504 1218 aa19.55■□□□□ 0.72
TGFBR1-201ENST00000374990 TSTD2Q5T7W7 516 aa19.55■□□□□ 0.72
TGFBR1-201ENST00000374990 ARHGAP22Q7Z5H3 698 aa19.55■□□□□ 0.72
TGFBR1-201ENST00000374990 TBATAQ96M53 351 aa19.55■□□□□ 0.72
TGFBR1-201ENST00000374990 UNC93B1Q9H1C4 597 aa19.55■□□□□ 0.72
TGFBR1-201ENST00000374990 ANKDD1BA6NHY2 528 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 SLC22A2O15244 555 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 LMO2P25791 158 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 CPSF6Q16630 551 aaKnown RBP eCLIP19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 PPP1R16AQ96I34 528 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 YIPF2Q9BWQ6 316 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 POLR1BQ9H9Y6 1135 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 GLTPD2A6NH11 291 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 PARNO95453 639 aaKnown RBP19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 PHKG1Q16816 387 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 SPATA22Q8NHS9 363 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 PIK3R5Q8WYR1 880 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 FUBP3Q96I24 572 aaKnown RBP eCLIP19.54■□□□□ 0.721e-6■■■■■ 31.3
TGFBR1-201ENST00000374990 GMLQ99445 158 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 GMIPQ9P107 970 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 C2orf71A6NGG8 1288 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 SYN3O14994 580 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 NPHS1O60500 1241 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 IFNGR2P38484 337 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 RHBDF2Q6PJF5 856 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 SEC14L1Q92503 715 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 TIFAQ96CG3 184 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 TMPRSS4Q9NRS4 437 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 ZNF510Q9Y2H8 683 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 KCNU1A8MYU2 1149 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 H0YGN5 161 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 KLF11O14901 512 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 PEX10O60683 326 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 NOGQ13253 232 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 ESRP1Q6NXG1 681 aaKnown RBP19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 HEXDCQ8WVB3 486 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 SUSD6Q92537 303 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 BBS4Q96RK4 519 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 SLC39A8Q9C0K1 460 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 NFS1Q9Y697 457 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 H3BN98 237 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 NTRK1P04629 796 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 BLMHQ13867 455 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 TRIP4Q15650 581 aaPredicted RBP19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 KHDC1Q4VXA5 237 aaKnown RBP19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 FSTL5Q8N475 847 aaPredicted RBP19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 WDR60Q8WVS4 1066 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 DDX1Q92499 740 aaKnown RBP19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 PSME2Q9UL46 239 aa19.54■□□□□ 0.72
TGFBR1-201ENST00000374990 GRK4P32298 578 aa19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 HCAR3P49019 387 aa19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 TAS2R39P59534 338 aa19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 LCP2Q13094 533 aa19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 SPANXN2Q5MJ10 180 aa19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 TXNRD3NBQ6F5E7 133 aa19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 TWNKQ96RR1 684 aa19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 ARHGAP1Q07960 439 aa19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 MTERF3Q96E29 417 aa19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 FCRL5Q96RD9 977 aa19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 TSEN34Q9BSV6 310 aaKnown RBP19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 EPB41L4BQ9H329 900 aa19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 TSC22D4Q9Y3Q8 395 aa19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 PRR23D1E9PI22 279 aaPredicted RBP19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 PRR23D2P0DMB1 279 aaPredicted RBP19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 TACR2P21452 398 aa19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 SKIV2LQ15477 1246 aaKnown RBP19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 SH3PXD2AQ5TCZ1 1133 aa19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 NDUFV1P49821 464 aa19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 ADARP55265 1226 aaKnown RBP19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 PFKPQ01813 784 aa19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 SP2Q02086 613 aa19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 TSNQ15631 228 aaKnown RBP19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 FGD3Q5JSP0 725 aa19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 HAPLN3Q96S86 360 aa19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 ADAM30Q9UKF2 790 aa19.53■□□□□ 0.72
TGFBR1-201ENST00000374990 TK2O00142 265 aa19.52■□□□□ 0.72
TGFBR1-201ENST00000374990 ADH1AP07327 375 aa19.52■□□□□ 0.72
TGFBR1-201ENST00000374990 ITGA2P17301 1181 aa19.52■□□□□ 0.72
TGFBR1-201ENST00000374990 IL10RBQ08334 325 aa19.52■□□□□ 0.72
TGFBR1-201ENST00000374990 TARBP2Q15633 366 aaKnown RBP19.52■□□□□ 0.72
TGFBR1-201ENST00000374990 GPR158Q5T848 1215 aa19.52■□□□□ 0.72
TGFBR1-201ENST00000374990 ZNF614Q8N883 585 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms