RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 GATA5Q9BWX5 397 aaPredicted RBP15.6■□□□□ 0.09
CCDC40-202ENST00000374876 C1QTNF1Q9BXJ1 281 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 SLC2A6Q9UGQ3 507 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 ACOT9Q9Y305 439 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 NUP210Q8TEM1 1887 aaPredicted RBP15.6■□□□□ 0.09
CCDC40-202ENST00000374876 BDP1A6H8Y1 2624 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 LEFTY2O00292 366 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 COL6A2P12110 1019 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 GLRBP48167 497 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 PRKAA2P54646 552 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 RAB10P61026 200 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 SLC34A1Q06495 639 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 NAA25Q14CX7 972 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 CNGA3Q16281 694 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 PCSK7Q16549 785 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 TSNAXIP1Q2TAA8 658 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 TRMT5Q32P41 509 aaKnown RBP15.6■□□□□ 0.09
CCDC40-202ENST00000374876 FSCBQ5H9T9 825 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 LIPMQ5VYY2 423 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 MSANTD2Q6P1R3 559 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 EPGNQ6UW88 154 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 RANBP10Q6VN20 620 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 TFAP2DQ7Z6R9 452 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 POU5F2Q8N7G0 328 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 AGR3Q8TD06 166 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 BPIFB1Q8TDL5 484 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 KCTD4Q8WVF5 259 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 WBP2Q969T9 261 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 CMTM5Q96DZ9 223 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 SLC39A13Q96H72 371 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 CLPTM1LQ96KA5 538 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 ZFRQ96KR1 1074 aaKnown RBP15.6■□□□□ 0.09
CCDC40-202ENST00000374876 TRMT61BQ9BVS5 477 aaKnown RBP15.6■□□□□ 0.09
CCDC40-202ENST00000374876 ILKAPQ9H0C8 392 aaPredicted RBP15.6■□□□□ 0.09
CCDC40-202ENST00000374876 DNMT3LQ9UJW3 386 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 ARHGAP26Q9UNA1 814 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 FAM95CA0A1B0GW59 222 aa15.59■□□□□ 0.09
CCDC40-202ENST00000374876 LUC7L3O95232 432 aaKnown RBP15.59■□□□□ 0.09
CCDC40-202ENST00000374876 IRF1P10914 325 aa15.59■□□□□ 0.09
CCDC40-202ENST00000374876 STMN1P16949 149 aa15.59■□□□□ 0.09
CCDC40-202ENST00000374876 PFKLP17858 780 aa15.59■□□□□ 0.09
CCDC40-202ENST00000374876 ARNTP27540 789 aa15.59■□□□□ 0.09
CCDC40-202ENST00000374876 GDI1P31150 447 aa15.59■□□□□ 0.09
CCDC40-202ENST00000374876 VHLP40337 213 aa15.59■□□□□ 0.09
CCDC40-202ENST00000374876 SLC1A2P43004 574 aa15.59■□□□□ 0.09
CCDC40-202ENST00000374876 RENBPP51606 427 aa15.59■□□□□ 0.09
CCDC40-202ENST00000374876 NDST2P52849 883 aa15.59■□□□□ 0.09
CCDC40-202ENST00000374876 PGGT1BP53609 377 aa15.59■□□□□ 0.09
CCDC40-202ENST00000374876 WNT3AP56704 352 aa15.59■□□□□ 0.09
CCDC40-202ENST00000374876 MUM1Q2TAK8 710 aa15.59■□□□□ 0.09
CCDC40-202ENST00000374876 UMODL1-AS1Q8N2C9 162 aa15.59■□□□□ 0.09
CCDC40-202ENST00000374876 DTX3LQ8TDB6 740 aa15.59■□□□□ 0.09
CCDC40-202ENST00000374876 FAM167BQ9BTA0 163 aa15.59■□□□□ 0.09
CCDC40-202ENST00000374876 ZYG11BQ9C0D3 744 aa15.59■□□□□ 0.09
CCDC40-202ENST00000374876 SLC25A51Q9H1U9 297 aa15.59■□□□□ 0.09
CCDC40-202ENST00000374876 DONSONQ9NYP3 566 aa15.59■□□□□ 0.09
CCDC40-202ENST00000374876 STX18Q9P2W9 335 aaKnown RBP15.59■□□□□ 0.09
CCDC40-202ENST00000374876 HMBSP08397 361 aa15.58■□□□□ 0.09
CCDC40-202ENST00000374876 RHOQP17081 205 aa15.58■□□□□ 0.09
CCDC40-202ENST00000374876 CRABP2P29373 138 aa15.58■□□□□ 0.09
CCDC40-202ENST00000374876 GCKP35557 465 aa15.58■□□□□ 0.09
CCDC40-202ENST00000374876 CPOXP36551 454 aa15.58■□□□□ 0.09
CCDC40-202ENST00000374876 CHRNA4P43681 627 aa15.58■□□□□ 0.09
CCDC40-202ENST00000374876 GRIA4P48058 902 aa15.58■□□□□ 0.09
CCDC40-202ENST00000374876 ITKQ08881 620 aa15.58■□□□□ 0.09
CCDC40-202ENST00000374876 HNRNPDQ14103 355 aaKnown RBP15.58■□□□□ 0.09
CCDC40-202ENST00000374876 C1orf146Q5VVC0 180 aa15.58■□□□□ 0.09
CCDC40-202ENST00000374876 ZNF470Q6ECI4 717 aa15.58■□□□□ 0.09
CCDC40-202ENST00000374876 KIAA0930Q6ICG6 404 aaPredicted RBP15.58■□□□□ 0.09
CCDC40-202ENST00000374876 RIPOR1Q6ZS17 1223 aa15.58■□□□□ 0.09
CCDC40-202ENST00000374876 YAF2Q8IY57 180 aa15.58■□□□□ 0.09
CCDC40-202ENST00000374876 KLF16Q9BXK1 252 aaPredicted RBP15.58■□□□□ 0.09
CCDC40-202ENST00000374876 DRC3Q9H069 523 aa15.58■□□□□ 0.09
CCDC40-202ENST00000374876 NOL6Q9H6R4 1146 aaKnown RBP15.58■□□□□ 0.09
CCDC40-202ENST00000374876 BATF3Q9NR55 127 aa15.58■□□□□ 0.09
CCDC40-202ENST00000374876 TREX1Q9NSU2 369 aa15.58■□□□□ 0.09
CCDC40-202ENST00000374876 OBP2AQ9NY56 170 aa15.58■□□□□ 0.09
CCDC40-202ENST00000374876 CFAP97Q9P2B7 532 aa15.58■□□□□ 0.09
CCDC40-202ENST00000374876 SLC7A8Q9UHI5 535 aa15.58■□□□□ 0.09
CCDC40-202ENST00000374876 BPTFQ12830 3046 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 TNFRSF10AO00220 468 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 NVLO15381 856 aaKnown RBP15.58■□□□□ 0.08
CCDC40-202ENST00000374876 CD151P48509 253 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 SLC25A3Q00325 362 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 FCHO2Q0JRZ9 810 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 ZNF77Q15935 545 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 SLC9B1Q4ZJI4 515 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 MS4A13Q5J8X5 152 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 IER5LQ5T953 404 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 TRIM68Q6AZZ1 485 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 LRRC8EQ6NSJ5 796 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 ZNF354CQ86Y25 554 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 CENPLQ8N0S6 344 aaPredicted RBP15.58■□□□□ 0.08
CCDC40-202ENST00000374876 FSTL5Q8N475 847 aaPredicted RBP15.58■□□□□ 0.08
CCDC40-202ENST00000374876 TMEM151AQ8N4L1 468 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 SLC25A41Q8N5S1 370 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 ATP6V0D2Q8N8Y2 350 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 C2CD4AQ8NCU7 369 aaPredicted RBP15.58■□□□□ 0.08
CCDC40-202ENST00000374876 STYXQ8WUJ0 223 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 DNAJC9Q8WXX5 260 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms