RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 SCYL2Q6P3W7 929 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 PAGE2Q7Z2X7 111 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 CCDC103Q8IW40 242 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 TBC1D21Q8IYX1 336 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 MTMR14Q8NCE2 650 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 BEST2Q8NFU1 509 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 RXFP2Q8WXD0 754 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 ZBED3Q96IU2 234 aaPredicted RBP12.93□□□□□ -0.34
PRPF4-201ENST00000374198 UBXN10Q96LJ8 280 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 TSNARE1Q96NA8 513 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 CHID1Q9BWS9 393 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 RHOBTB2Q9BYZ6 727 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 GTSE1Q9NYZ3 720 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 TLK1Q9UKI8 766 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 FZD1Q9UP38 647 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 PDE10AQ9Y233 779 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 FIS1Q9Y3D6 152 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 SNX5Q9Y5X3 404 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 INPP4BO15327 924 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 MED7O43513 233 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 TIMM44O43615 452 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 PTTG1O95997 202 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 GTF2A2P52657 109 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 MRPS15P82914 257 aaKnown RBP12.93□□□□□ -0.34
PRPF4-201ENST00000374198 CA9Q16790 459 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 DEFB115Q30KQ5 88 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 CDONQ4KMG0 1287 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 BOLA3Q53S33 107 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 OTUD3Q5T2D3 398 aaPredicted RBP12.93□□□□□ -0.34
PRPF4-201ENST00000374198 NEK5Q6P3R8 708 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 SCARA5Q6ZMJ2 495 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 NIPA1Q7RTP0 329 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 RETREG3Q86VR2 466 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 C8orf59Q8N0T1 100 aaPredicted RBP12.93□□□□□ -0.34
PRPF4-201ENST00000374198 OR6F1Q8NGZ6 308 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 IL31RAQ8NI17 732 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 SLC10A4Q96EP9 437 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 CEP170P1Q96L14 293 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 PGLYRP2Q96PD5 576 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 QKIQ96PU8 341 aaKnown RBP eCLIP12.93□□□□□ -0.34
PRPF4-201ENST00000374198 HOPXQ9BPY8 73 aaPredicted RBP12.93□□□□□ -0.34
PRPF4-201ENST00000374198 C2orf40Q9H1Z8 148 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 IL1RL2Q9HB29 575 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 ANKRD6Q9Y2G4 727 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 TRPM7Q96QT4 1865 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 ZNF99A8MXY4 864 aaPredicted RBP12.92□□□□□ -0.34
PRPF4-201ENST00000374198 TARM1B6A8C7 271 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 NPHS1O60500 1241 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 PCMT1P22061 227 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 ALDH4A1P30038 563 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 LSM3P62310 102 aaKnown RBP12.92□□□□□ -0.34
PRPF4-201ENST00000374198 NFE2Q16621 373 aaPredicted RBP12.92□□□□□ -0.34
PRPF4-201ENST00000374198 C6orf141Q5SZD1 244 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 ATAD3CQ5T2N8 411 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 FAM35AQ86V20 835 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 FSTL5Q8N475 847 aaPredicted RBP12.92□□□□□ -0.34
PRPF4-201ENST00000374198 LSMEM1Q8N8F7 131 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 COLGALT1Q8NBJ5 622 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 PAPD5Q8NDF8 572 aaKnown RBP12.92□□□□□ -0.34
PRPF4-201ENST00000374198 ELMO2Q96JJ3 720 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 TDRD3Q9H7E2 651 aaKnown RBP12.92□□□□□ -0.34
PRPF4-201ENST00000374198 MEAF6Q9HAF1 191 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 EIF2B3Q9NR50 452 aaKnown RBP12.92□□□□□ -0.34
PRPF4-201ENST00000374198 IL37Q9NZH6 218 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 SLC39A10Q9ULF5 831 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 RUVBL2Q9Y230 463 aaKnown RBP12.92□□□□□ -0.34
PRPF4-201ENST00000374198 A0A0A0MRY4 1105 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 SAGE2PA6NJ88 616 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 C2CD4BA6NLJ0 364 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 TBX1O43435 398 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 FKBP9O95302 570 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 M6PRP20645 277 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 CYP2F1P24903 491 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 VBP1P61758 197 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 SMU1Q2TAY7 513 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 AGAP6Q5VW22 663 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 PRMT9Q6P2P2 845 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 CNSTQ6PJW8 725 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 SVOPQ8N4V2 548 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 C2orf69Q8N8R5 385 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 ZNF280CQ8ND82 737 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 TRIM63Q969Q1 353 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 SPATA13Q96N96 652 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 AGAP4Q96P64 663 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 DEPDC7Q96QD5 511 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 TMEM246Q9BRR3 403 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 ZNF670Q9BS34 389 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 MSTO1Q9BUK6 570 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 GBA2Q9HCG7 927 aaPredicted RBP12.92□□□□□ -0.34
PRPF4-201ENST00000374198 DDX28Q9NUL7 540 aaKnown RBP12.92□□□□□ -0.34
PRPF4-201ENST00000374198 MAP10Q9P2G4 905 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 FBXO9Q9UK97 447 aaPredicted RBP12.92□□□□□ -0.34
PRPF4-201ENST00000374198 MAGEB16A2A368 324 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 H0YCG3 227 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 CHRNA1P02708 482 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 BMP1P13497 986 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 PPP2R2BQ00005 443 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 MTMR1Q13613 665 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 ACAP2Q15057 778 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 SEZ6Q53EL9 994 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms