RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 GFRA2O00451 464 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 ZBTB24O43167 697 aaPredicted RBP14.34□□□□□ -0.11
HMGA1-203ENST00000374116 PSMD3O43242 534 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 DCXO43602 365 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 GLRA3O75311 464 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 ADH1CP00326 375 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 PABPC4LP0CB38 370 aaKnown RBP14.34□□□□□ -0.11
HMGA1-203ENST00000374116 OPRD1P41143 372 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 NPY2RP49146 381 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 PFKPQ01813 784 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 BST1Q10588 318 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 ZBTB17Q13105 803 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 CHI3L2Q15782 390 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 FSCBQ5H9T9 825 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 GRTP1Q5TC63 336 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 AFMIDQ63HM1 303 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 ASTLQ6HA08 431 aaPredicted RBP14.34□□□□□ -0.11
HMGA1-203ENST00000374116 RASSF3Q86WH2 238 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 ZNF683Q8IZ20 524 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 CPXM2Q8N436 756 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 CARNMT1Q8N4J0 409 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 OR52K1Q8NGK4 314 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 CERS2Q96G23 380 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 C1orf74Q96LT6 269 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 TEKT5Q96M29 485 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 CPNE1Q99829 537 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 CADM1Q9BY67 442 aaKnown RBP14.34□□□□□ -0.11
HMGA1-203ENST00000374116 ZDHHC4Q9NPG8 344 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 PIH1D1Q9NWS0 290 aaKnown RBP14.34□□□□□ -0.11
HMGA1-203ENST00000374116 GALNT8Q9NY28 637 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 KCNK4Q9NYG8 393 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 TXNDC16Q9P2K2 825 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 NDRG2Q9UN36 371 aaKnown RBP14.34□□□□□ -0.11
HMGA1-203ENST00000374116 TECTAO75443 2155 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 STK25O00506 426 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 HAUS5O94927 633 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 ALDOAP04075 364 aaKnown RBP14.34□□□□□ -0.11
HMGA1-203ENST00000374116 ITGA2BP08514 1039 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 GP5P40197 560 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 GALK1P51570 392 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 MLF2Q15773 248 aaPredicted RBP14.34□□□□□ -0.11
HMGA1-203ENST00000374116 INSCQ1MX18 579 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 ACSBG2Q5FVE4 666 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 FAM91A1Q658Y4 838 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 TMEM135Q86UB9 458 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 LZTR1Q8N653 840 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 OR52K2Q8NGK3 314 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 DNASE1L2Q92874 299 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 SKA1Q96BD8 255 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 AGAP3Q96P47 875 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 BTBD10Q9BSF8 475 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 MECRQ9BV79 373 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 FOXQ1Q9C009 403 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 OCEL1Q9H607 264 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 NDFIP2Q9NV92 336 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 NDUFA13Q9P0J0 144 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 ANGPTL2Q9UKU9 493 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 SHROOM3Q8TF72 1996 aa14.33□□□□□ -0.11
HMGA1-203ENST00000374116 NUP205Q92621 2012 aa14.33□□□□□ -0.12
HMGA1-203ENST00000374116 WASH4PA8MWX3 477 aa14.33□□□□□ -0.12
HMGA1-203ENST00000374116 F8W8V4 182 aa14.33□□□□□ -0.12
HMGA1-203ENST00000374116 TPP1O14773 563 aa14.33□□□□□ -0.12
HMGA1-203ENST00000374116 FGF10O15520 208 aaPredicted RBP14.33□□□□□ -0.12
HMGA1-203ENST00000374116 SNNO75324 88 aaPredicted RBP14.33□□□□□ -0.12
HMGA1-203ENST00000374116 TULP3O75386 442 aa14.33□□□□□ -0.12
HMGA1-203ENST00000374116 USP1O94782 785 aa14.33□□□□□ -0.12
HMGA1-203ENST00000374116 LATS1O95835 1130 aa14.33□□□□□ -0.12
HMGA1-203ENST00000374116 CYBBP04839 570 aa14.33□□□□□ -0.12
HMGA1-203ENST00000374116 TPP2P29144 1249 aaPredicted RBP14.33□□□□□ -0.12
HMGA1-203ENST00000374116 RPL26P61254 145 aaKnown RBP14.33□□□□□ -0.12
HMGA1-203ENST00000374116 PDE1BQ01064 536 aa14.33□□□□□ -0.12
HMGA1-203ENST00000374116 ZBTB16Q05516 673 aa14.33□□□□□ -0.12
HMGA1-203ENST00000374116 SULT2A1Q06520 285 aa14.33□□□□□ -0.12
HMGA1-203ENST00000374116 PRPSAP1Q14558 356 aa14.33□□□□□ -0.12
HMGA1-203ENST00000374116 MPPE1Q53F39 396 aa14.33□□□□□ -0.12
HMGA1-203ENST00000374116 UBALD2Q8IYN6 164 aa14.33□□□□□ -0.12
HMGA1-203ENST00000374116 DNAAF3Q8N9W5 541 aa14.33□□□□□ -0.12
HMGA1-203ENST00000374116 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.33□□□□□ -0.123e-8■■■■■ 29.8
HMGA1-203ENST00000374116 PTCD3Q96EY7 689 aaKnown RBP14.33□□□□□ -0.12
HMGA1-203ENST00000374116 MLPHQ9BV36 600 aaPredicted RBP14.33□□□□□ -0.12
HMGA1-203ENST00000374116 EPHX3Q9H6B9 360 aa14.33□□□□□ -0.12
HMGA1-203ENST00000374116 PREBQ9HCU5 417 aa14.33□□□□□ -0.12
HMGA1-203ENST00000374116 DOCK4Q8N1I0 1966 aa14.32□□□□□ -0.12
HMGA1-203ENST00000374116 FAM237BA0A1B0GVD1 139 aa14.32□□□□□ -0.12
HMGA1-203ENST00000374116 SMIM31A0A1B0GVY4 71 aa14.32□□□□□ -0.12
HMGA1-203ENST00000374116 ARHGAP42A6NI28 874 aa14.32□□□□□ -0.12
HMGA1-203ENST00000374116 TMCC1O94876 653 aa14.32□□□□□ -0.12
HMGA1-203ENST00000374116 CBX6O95503 412 aa14.32□□□□□ -0.12
HMGA1-203ENST00000374116 ATP5BP06576 529 aaKnown RBP14.32□□□□□ -0.12
HMGA1-203ENST00000374116 ERVK-10P10266 1014 aa14.32□□□□□ -0.12
HMGA1-203ENST00000374116 NFKB1P19838 968 aa14.32□□□□□ -0.12
HMGA1-203ENST00000374116 CCNCP24863 283 aa14.32□□□□□ -0.12
HMGA1-203ENST00000374116 STX3Q13277 289 aa14.32□□□□□ -0.12
HMGA1-203ENST00000374116 PDE1CQ14123 709 aaPredicted RBP14.32□□□□□ -0.12
HMGA1-203ENST00000374116 KRT72Q14CN4 511 aa14.32□□□□□ -0.12
HMGA1-203ENST00000374116 CRLF3Q8IUI8 442 aa14.32□□□□□ -0.12
HMGA1-203ENST00000374116 ETFBKMTQ8IXQ9 262 aa14.32□□□□□ -0.12
HMGA1-203ENST00000374116 CNTD1Q8N815 330 aa14.32□□□□□ -0.12
HMGA1-203ENST00000374116 FAM3CQ92520 227 aa14.32□□□□□ -0.12
HMGA1-203ENST00000374116 EDAQ92838 391 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms