RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 SMPD3Q9NY59 655 aaPredicted RBP17.43■□□□□ 0.38
PTPRU-202ENST00000373779 SIRPGQ9P1W8 387 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 ST3GAL5Q9UNP4 418 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 GIT1Q9Y2X7 761 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 CCDC189A1A4V9 331 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 AMHP03971 560 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 HPCAP84074 193 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 NCF4Q15080 339 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 DQX1Q8TE96 717 aaKnown RBP17.43■□□□□ 0.38
PTPRU-202ENST00000373779 RSPH1Q8WYR4 309 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 IRGQQ8WZA9 623 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 SLC7A6OSQ96CW6 309 aaPredicted RBP17.43■□□□□ 0.38
PTPRU-202ENST00000373779 SLC47A1Q96FL8 570 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 SYT11Q9BT88 431 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 PRKAG2Q9UGJ0 569 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 ENOPH1Q9UHY7 261 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 FBXW11Q9UKB1 542 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 KDM4FA0A1W2PPD8 638 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 E7ESA3 106 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 G3V2T6 193 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 ANXA5P08758 320 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 COX7A2P14406 83 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 ZNF132P52740 706 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 SPANXN2Q5MJ10 180 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 RSBN1Q5VWQ0 802 aaPredicted RBP17.43■□□□□ 0.38
PTPRU-202ENST00000373779 TMEM198Q66K66 360 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 STARD8Q92502 1023 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 TMEM169Q96HH4 297 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 STRA6Q9BX79 667 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 FAM105AQ9NUU6 356 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 SMPD4Q9NXE4 827 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 KLRG2A4D1S0 409 aaPredicted RBP17.42■□□□□ 0.38
PTPRU-202ENST00000373779 LZTS3O60299 673 aaPredicted RBP17.42■□□□□ 0.38
PTPRU-202ENST00000373779 RPP40O75818 363 aaKnown RBP17.42■□□□□ 0.38
PTPRU-202ENST00000373779 LRG1P02750 347 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 EPB42P16452 691 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 CYP3A5P20815 502 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 LPOP22079 712 aaPredicted RBP17.42■□□□□ 0.38
PTPRU-202ENST00000373779 LSM3P62310 102 aaKnown RBP17.42■□□□□ 0.38
PTPRU-202ENST00000373779 C11orf96Q7Z7L8 435 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 CENPNQ96H22 339 aaPredicted RBP17.42■□□□□ 0.38
PTPRU-202ENST00000373779 POLR3HQ9Y535 204 aaPredicted RBP17.42■□□□□ 0.38
PTPRU-202ENST00000373779 SNX10Q9Y5X0 201 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 MATN3O15232 486 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 POLR2JP52435 117 aaKnown RBP17.42■□□□□ 0.38
PTPRU-202ENST00000373779 TAS2R39P59534 338 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 PWP1Q13610 501 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 DUSP28Q4G0W2 176 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 SYTL1Q8IYJ3 562 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 AHI1Q8N157 1196 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 TTC30BQ8N4P2 665 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 KRT84Q9NSB2 600 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 NPEPPSL1A6NEC2 478 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 HTR7P34969 479 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 RPS6KA3P51812 740 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 USP46P62068 366 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 ZNF846Q147U1 533 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 TMEM63BQ5T3F8 832 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 GPR142Q7Z601 462 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 LDB1Q86U70 411 aaPredicted RBP17.42■□□□□ 0.38
PTPRU-202ENST00000373779 ZDHHC14Q8IZN3 488 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 OSBPL6Q9BZF3 934 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 RPS6KA6Q9UK32 745 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 CAB39Q9Y376 341 aaPredicted RBP17.42■□□□□ 0.38
PTPRU-202ENST00000373779 GPIP06744 558 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 XRCC1P18887 633 aaPredicted RBP17.42■□□□□ 0.38
PTPRU-202ENST00000373779 PAX3P23760 479 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 ATP5C1P36542 298 aaKnown RBP17.42■□□□□ 0.38
PTPRU-202ENST00000373779 DLG1Q12959 904 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 SDHAF4Q5VUM1 108 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 CDCA2Q69YH5 1023 aaPredicted RBP17.42■□□□□ 0.38
PTPRU-202ENST00000373779 GLYATQ6IB77 296 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 OLFML1Q6UWY5 402 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 S100ZQ8WXG8 99 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 SNX6Q9UNH7 406 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 SEC24AO95486 1093 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 BRCC3P46736 316 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 DAOAP59103 153 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 RFX4Q33E94 735 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 TREML1Q86YW5 311 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 ZNF540Q8NDQ6 660 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 MTERF3Q96E29 417 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 ZFYVE19Q96K21 471 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 ASB8Q9H765 288 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 MIEF1Q9NQG6 463 aa17.42■□□□□ 0.38
PTPRU-202ENST00000373779 WARSP23381 471 aaKnown RBP17.41■□□□□ 0.38
PTPRU-202ENST00000373779 SCNN1AP37088 669 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 RPS9P46781 194 aaKnown RBP17.41■□□□□ 0.38
PTPRU-202ENST00000373779 LIPEQ05469 1076 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 CAMK2GQ13555 558 aaPredicted RBP17.41■□□□□ 0.38
PTPRU-202ENST00000373779 PCLAFQ15004 111 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 PHTF2Q8N3S3 785 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 PQLC3Q8N755 202 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 OR2T12Q8NG77 320 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 SIGLEC10Q96LC7 697 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 HERPUD2Q9BSE4 406 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 E9PAM4 449 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 RFPL1O75677 317 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 H6PDO95479 791 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 EPGNQ6UW88 154 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms