RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 FPGSQ05932 587 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 AFTPHQ6ULP2 937 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 EPGNQ6UW88 154 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 TPGS1Q6ZTW0 290 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 EFHBQ8N7U6 833 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 MAPK15Q8TD08 544 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 SP7Q8TDD2 431 aaPredicted RBP19.6■□□□□ 0.73
HDAC1-201ENST00000373548 C2orf49Q9BVC5 232 aaPredicted RBP19.6■□□□□ 0.73
HDAC1-201ENST00000373548 TMEM106CQ9BVX2 250 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 EMILIN2Q9BXX0 1053 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 CADM1Q9BY67 442 aaKnown RBP19.6■□□□□ 0.73
HDAC1-201ENST00000373548 SORCS3Q9UPU3 1222 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 GBF1Q92538 1859 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 LEFTY2O00292 366 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 PMLP29590 882 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 ASPHQ12797 758 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 ACAP2Q15057 778 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 TBCCQ15814 346 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 MPPE1Q53F39 396 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 CFAP157Q5JU67 520 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 MPP7Q5T2T1 576 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 GPR158Q5T848 1215 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 PLPP4Q5VZY2 271 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 KLC3Q6P597 504 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 POMKQ9H5K3 350 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 POLR3BQ9NW08 1133 aaPredicted RBP19.6■□□□□ 0.73
HDAC1-201ENST00000373548 TAS2R1Q9NYW7 299 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 SMAD6O43541 496 aaKnown RBP19.59■□□□□ 0.73
HDAC1-201ENST00000373548 FZD6O60353 706 aa19.59■□□□□ 0.73
HDAC1-201ENST00000373548 RBP1P09455 135 aa19.59■□□□□ 0.73
HDAC1-201ENST00000373548 HOXB8P17481 243 aaPredicted RBP19.59■□□□□ 0.73
HDAC1-201ENST00000373548 KCNA5P22460 613 aa19.59■□□□□ 0.73
HDAC1-201ENST00000373548 SLC26A3P40879 764 aa19.59■□□□□ 0.73
HDAC1-201ENST00000373548 CPA2P48052 419 aa19.59■□□□□ 0.73
HDAC1-201ENST00000373548 DNAJB13P59910 316 aa19.59■□□□□ 0.73
HDAC1-201ENST00000373548 LMAN2Q12907 356 aa19.59■□□□□ 0.73
HDAC1-201ENST00000373548 RALGPS1Q5JS13 557 aa19.59■□□□□ 0.73
HDAC1-201ENST00000373548 TMEM240Q5SV17 173 aa19.59■□□□□ 0.73
HDAC1-201ENST00000373548 TTC30BQ8N4P2 665 aa19.59■□□□□ 0.73
HDAC1-201ENST00000373548 CCNYL1Q8N7R7 359 aa19.59■□□□□ 0.73
HDAC1-201ENST00000373548 MRPL43Q8N983 215 aaKnown RBP19.59■□□□□ 0.73
HDAC1-201ENST00000373548 TM6SF2Q9BZW4 377 aa19.59■□□□□ 0.73
HDAC1-201ENST00000373548 INTS10Q9NVR2 710 aaKnown RBP19.59■□□□□ 0.73
HDAC1-201ENST00000373548 MATN2O00339 956 aa19.58■□□□□ 0.73
HDAC1-201ENST00000373548 CTNNB1P35222 781 aa19.58■□□□□ 0.73
HDAC1-201ENST00000373548 RPL14P50914 215 aaKnown RBP19.58■□□□□ 0.73
HDAC1-201ENST00000373548 SUOXP51687 545 aa19.58■□□□□ 0.73
HDAC1-201ENST00000373548 PRKAA1Q13131 559 aa19.58■□□□□ 0.73
HDAC1-201ENST00000373548 SLC9B1Q4ZJI4 515 aa19.58■□□□□ 0.73
HDAC1-201ENST00000373548 PPM1LQ5SGD2 360 aa19.58■□□□□ 0.73
HDAC1-201ENST00000373548 RETSATQ6NUM9 610 aa19.58■□□□□ 0.73
HDAC1-201ENST00000373548 FAM13CQ8NE31 585 aa19.58■□□□□ 0.73
HDAC1-201ENST00000373548 RAD9AQ99638 391 aa19.58■□□□□ 0.73
HDAC1-201ENST00000373548 AARSD1Q9BTE6 412 aaKnown RBP19.58■□□□□ 0.73
HDAC1-201ENST00000373548 TAGLN3Q9UI15 199 aa19.58■□□□□ 0.73
HDAC1-201ENST00000373548 PCDHB9Q9Y5E1 797 aa19.58■□□□□ 0.73
HDAC1-201ENST00000373548 MYOFQ9NZM1 2061 aa19.58■□□□□ 0.73
HDAC1-201ENST00000373548 A0A0U1RQS6 177 aa19.58■□□□□ 0.72
HDAC1-201ENST00000373548 GYG2O15488 501 aa19.58■□□□□ 0.72
HDAC1-201ENST00000373548 NPHS1O60500 1241 aa19.58■□□□□ 0.72
HDAC1-201ENST00000373548 PFKLP17858 780 aa19.58■□□□□ 0.72
HDAC1-201ENST00000373548 TFEBP19484 476 aa19.58■□□□□ 0.72
HDAC1-201ENST00000373548 AOC1P19801 751 aa19.58■□□□□ 0.72
HDAC1-201ENST00000373548 BMPR1AP36894 532 aa19.58■□□□□ 0.72
HDAC1-201ENST00000373548 AP1S1P61966 158 aa19.58■□□□□ 0.72
HDAC1-201ENST00000373548 TRIM67Q6ZTA4 783 aa19.58■□□□□ 0.72
HDAC1-201ENST00000373548 FIBINQ8TAL6 211 aa19.58■□□□□ 0.72
HDAC1-201ENST00000373548 SHKBP1Q8TBC3 707 aa19.58■□□□□ 0.72
HDAC1-201ENST00000373548 LPGAT1Q92604 370 aa19.58■□□□□ 0.72
HDAC1-201ENST00000373548 ACDQ96AP0 544 aa19.58■□□□□ 0.72
HDAC1-201ENST00000373548 SHCBP1LQ9BZQ2 653 aa19.58■□□□□ 0.72
HDAC1-201ENST00000373548 ZDHHC2Q9UIJ5 367 aa19.58■□□□□ 0.72
HDAC1-201ENST00000373548 FKBPLQ9UIM3 349 aa19.58■□□□□ 0.72
HDAC1-201ENST00000373548 ARHGAP26Q9UNA1 814 aa19.58■□□□□ 0.72
HDAC1-201ENST00000373548 LZTS1Q9Y250 596 aa19.58■□□□□ 0.72
HDAC1-201ENST00000373548 A8MT66 165 aa19.57■□□□□ 0.72
HDAC1-201ENST00000373548 GSC2O15499 205 aa19.57■□□□□ 0.72
HDAC1-201ENST00000373548 CD70P32970 193 aa19.57■□□□□ 0.72
HDAC1-201ENST00000373548 CDKN1CP49918 316 aaPredicted RBP19.57■□□□□ 0.72
HDAC1-201ENST00000373548 CLCN4P51793 760 aa19.57■□□□□ 0.72
HDAC1-201ENST00000373548 PIWIL4Q7Z3Z4 852 aaKnown RBP19.57■□□□□ 0.72
HDAC1-201ENST00000373548 ISCA2Q86U28 154 aa19.57■□□□□ 0.72
HDAC1-201ENST00000373548 CYP4F12Q9HCS2 524 aa19.57■□□□□ 0.72
HDAC1-201ENST00000373548 MAN1C1Q9NR34 630 aa19.57■□□□□ 0.72
HDAC1-201ENST00000373548 KIAA1522Q9P206 1035 aaPredicted RBP19.57■□□□□ 0.72
HDAC1-201ENST00000373548 CCL26Q9Y258 94 aa19.57■□□□□ 0.72
HDAC1-201ENST00000373548 UBA6A0AVT1 1052 aaPredicted RBP19.57■□□□□ 0.72
HDAC1-201ENST00000373548 HDAC3O15379 428 aa19.57■□□□□ 0.72
HDAC1-201ENST00000373548 GRID2O43424 1007 aa19.57■□□□□ 0.72
HDAC1-201ENST00000373548 HK2P52789 917 aa19.57■□□□□ 0.72
HDAC1-201ENST00000373548 LBX1P52954 281 aa19.57■□□□□ 0.72
HDAC1-201ENST00000373548 KDSRQ06136 332 aa19.57■□□□□ 0.72
HDAC1-201ENST00000373548 TEX9Q8N6V9 391 aa19.57■□□□□ 0.72
HDAC1-201ENST00000373548 OR6K2Q8NGY2 324 aa19.57■□□□□ 0.72
HDAC1-201ENST00000373548 FBXO27Q8NI29 283 aa19.57■□□□□ 0.72
HDAC1-201ENST00000373548 CCDC126Q96EE4 140 aa19.57■□□□□ 0.72
HDAC1-201ENST00000373548 TCEAL4Q96EI5 215 aa19.57■□□□□ 0.72
HDAC1-201ENST00000373548 TCF12Q99081 682 aa19.57■□□□□ 0.72
HDAC1-201ENST00000373548 ALG9Q9H6U8 611 aa19.57■□□□□ 0.72
HDAC1-201ENST00000373548 POPDC3Q9HBV1 291 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms