RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 MPZL3Q6UWV2 235 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 DDIASQ8IXT1 998 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 PELI3Q8N2H9 469 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 CPSF7Q8N684 471 aaKnown RBP5.43□□□□□ -1.54
ATG4A-204ENST00000372246 CATSPER1Q8NEC5 780 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 ACMSDQ8TDX5 336 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 RNF139Q8WU17 664 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 GPRASP2Q96D09 838 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 CLIP3Q96DZ5 547 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 ZMAT2Q96NC0 199 aaKnown RBP5.43□□□□□ -1.54
ATG4A-204ENST00000372246 ALPK1Q96QP1 1244 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 TCF12Q99081 682 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 OLFM1Q99784 485 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 FDXACB1Q9BRP7 624 aaPredicted RBP5.43□□□□□ -1.54
ATG4A-204ENST00000372246 ZNF670Q9BS34 389 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 RHOBTB2Q9BYZ6 727 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 CCDC90BQ9GZT6 254 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 PIGVQ9NUD9 493 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 KLK14Q9P0G3 267 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 SLCO3A1Q9UIG8 710 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 ZNF214Q9UL59 606 aaPredicted RBP5.43□□□□□ -1.54
ATG4A-204ENST00000372246 TCAF1Q9Y4C2 921 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 PCDHGA3Q9Y5H0 932 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 N6AMT1Q9Y5N5 214 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 DHRS12A0PJE2 317 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 A8MV72 311 aaPredicted RBP5.43□□□□□ -1.54
ATG4A-204ENST00000372246 TARM1B6A8C7 271 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 CBFA2T3O75081 653 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 JRKO75564 520 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 GJB3O75712 270 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 SRP72O76094 671 aaKnown RBP5.43□□□□□ -1.54
ATG4A-204ENST00000372246 BAIAP3O94812 1187 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 SLC4A1P02730 911 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 HTR1AP08908 422 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 PABPC1P11940 636 aaKnown RBP5.43□□□□□ -1.54
ATG4A-204ENST00000372246 ARNTP27540 789 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 ADSLP30566 484 aaPredicted RBP5.43□□□□□ -1.54
ATG4A-204ENST00000372246 GARSP41250 739 aaKnown RBP5.43□□□□□ -1.54
ATG4A-204ENST00000372246 MAGEA12P43365 314 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 HSPA13P48723 471 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 NEK2P51955 445 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 SH3BGRP55822 239 aaPredicted RBP5.43□□□□□ -1.54
ATG4A-204ENST00000372246 CCNA1P78396 465 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 PRKAA1Q13131 559 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 DGCR6Q14129 220 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 SEPT6Q14141 434 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 DPYSL2Q16555 572 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 GEN1Q17RS7 908 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 DPY19L1Q2PZI1 675 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 SLC36A3Q495N2 470 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 CATSPEREQ5SY80 951 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 XAF1Q6GPH4 301 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 PPP4R4Q6NUP7 873 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 EFCAB12Q6NXP0 572 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 FAM117BQ6P1L5 589 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 SPATC1Q76KD6 591 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 VASH1Q7L8A9 365 aaPredicted RBP5.43□□□□□ -1.54
ATG4A-204ENST00000372246 ERMP1Q7Z2K6 904 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 HEATR4Q86WZ0 1026 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 PDZD8Q8NEN9 1154 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 IPMKQ8NFU5 416 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 ABHD11Q8NFV4 315 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 OR52K2Q8NGK3 314 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 RDH11Q8TC12 318 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 STYXQ8WUJ0 223 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 EDEM1Q92611 657 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 RPL3LQ92901 407 aaKnown RBP5.43□□□□□ -1.54
ATG4A-204ENST00000372246 CDK15Q96Q40 435 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 MYOCQ99972 504 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 C1orf50Q9BV19 199 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 TBCCD1Q9NVR7 557 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 MORF4L1Q9UBU8 362 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 FBXO10Q9UK96 956 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 CROTQ9UKG9 612 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 ERGIC3Q9Y282 383 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 CAB39Q9Y376 341 aaPredicted RBP5.43□□□□□ -1.54
ATG4A-204ENST00000372246 TIMM22Q9Y584 194 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 CPQQ9Y646 472 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 COMMD10Q9Y6G5 202 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 U3KQV3 271 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 FAM95CA0A1B0GW59 222 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 TMEM114B3SHH9 223 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 M0QYT0 321 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 AP3B1O00203 1094 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 ARPC2O15144 300 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 WDR46O15213 610 aaKnown RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 XPNPEP2O43895 674 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 SSX4O60224 188 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 PEX14O75381 377 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 PMPCBO75439 489 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 DDHD2O94830 711 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 MYO1DO94832 1006 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 SUPT7LO94864 414 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 FARP2O94887 1054 aaPredicted RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 MLYCDO95822 493 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 BCL10O95999 233 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 SNRPB2P08579 225 aaKnown RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 PRSS56P0CW18 603 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 SPNP16150 400 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 ERCC2P18074 760 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms