RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 XRCC1P18887 633 aaPredicted RBP28.95■■■□□ 2.23
SSBP3-204ENST00000371320 OGNP20774 298 aaKnown RBP28.95■■■□□ 2.23
SSBP3-204ENST00000371320 PAX7P23759 505 aa28.95■■■□□ 2.23
SSBP3-204ENST00000371320 TIAL1Q01085 375 aaKnown RBP eCLIP28.95■■■□□ 2.233e-6■■■■□ 20.6
SSBP3-204ENST00000371320 CEACAM7Q14002 265 aa28.95■■■□□ 2.23
SSBP3-204ENST00000371320 FLOT2Q14254 428 aa28.95■■■□□ 2.23
SSBP3-204ENST00000371320 GK5Q6ZS86 529 aa28.95■■■□□ 2.23
SSBP3-204ENST00000371320 BCL7CQ8WUZ0 217 aaPredicted RBP28.95■■■□□ 2.23
SSBP3-204ENST00000371320 PPP2R3CQ969Q6 453 aa28.95■■■□□ 2.23
SSBP3-204ENST00000371320 MRPL1Q9BYD6 325 aaKnown RBP28.95■■■□□ 2.23
SSBP3-204ENST00000371320 RETREG1Q9H6L5 497 aa28.95■■■□□ 2.23
SSBP3-204ENST00000371320 HMX1Q9NP08 348 aaPredicted RBP28.95■■■□□ 2.23
SSBP3-204ENST00000371320 BCAP29Q9UHQ4 241 aa28.95■■■□□ 2.23
SSBP3-204ENST00000371320 UBFD1O14562 309 aaKnown RBP28.95■■■□□ 2.22
SSBP3-204ENST00000371320 ADAM12O43184 909 aa28.95■■■□□ 2.22
SSBP3-204ENST00000371320 HOXA2O43364 376 aa28.95■■■□□ 2.22
SSBP3-204ENST00000371320 UPP2O95045 317 aa28.95■■■□□ 2.22
SSBP3-204ENST00000371320 INHBCP55103 352 aa28.95■■■□□ 2.22
SSBP3-204ENST00000371320 OXCT1P55809 520 aa28.95■■■□□ 2.22
SSBP3-204ENST00000371320 RPS24P62847 133 aaKnown RBP28.95■■■□□ 2.22
SSBP3-204ENST00000371320 NFKB2Q00653 900 aa28.95■■■□□ 2.22
SSBP3-204ENST00000371320 SQLEQ14534 574 aa28.95■■■□□ 2.22
SSBP3-204ENST00000371320 TRIP10Q15642 601 aa28.95■■■□□ 2.22
SSBP3-204ENST00000371320 EXT2Q93063 718 aa28.95■■■□□ 2.22
SSBP3-204ENST00000371320 PSKH2Q96QS6 385 aa28.95■■■□□ 2.22
SSBP3-204ENST00000371320 ZDHHC7Q9NXF8 308 aa28.95■■■□□ 2.22
SSBP3-204ENST00000371320 GPC4O75487 556 aa28.94■■■□□ 2.22
SSBP3-204ENST00000371320 GJB5O95377 273 aa28.94■■■□□ 2.22
SSBP3-204ENST00000371320 CRTAMO95727 393 aa28.94■■■□□ 2.22
SSBP3-204ENST00000371320 PEX2P28328 305 aa28.94■■■□□ 2.22
SSBP3-204ENST00000371320 STC1P52823 247 aa28.94■■■□□ 2.22
SSBP3-204ENST00000371320 HERVK_113P63132 956 aa28.94■■■□□ 2.22
SSBP3-204ENST00000371320 PPP1R3AQ16821 1122 aa28.94■■■□□ 2.22
SSBP3-204ENST00000371320 UNC50Q53HI1 259 aa28.94■■■□□ 2.22
SSBP3-204ENST00000371320 DENND1CQ8IV53 801 aa28.94■■■□□ 2.22
SSBP3-204ENST00000371320 TMA16Q96EY4 203 aaKnown RBP28.94■■■□□ 2.22
SSBP3-204ENST00000371320 CDKN2AIPNLQ96HQ2 116 aa28.94■■■□□ 2.22
SSBP3-204ENST00000371320 ERVK-6Q9BXR3 956 aa28.94■■■□□ 2.22
SSBP3-204ENST00000371320 POPDC3Q9HBV1 291 aa28.94■■■□□ 2.22
SSBP3-204ENST00000371320 H3BNC9 293 aa28.93■■■□□ 2.22
SSBP3-204ENST00000371320 ARSAP15289 507 aa28.93■■■□□ 2.22
SSBP3-204ENST00000371320 TSPAN8P19075 237 aa28.93■■■□□ 2.22
SSBP3-204ENST00000371320 ME2P23368 584 aa28.93■■■□□ 2.22
SSBP3-204ENST00000371320 DPP6P42658 865 aa28.93■■■□□ 2.22
SSBP3-204ENST00000371320 SUOXP51687 545 aa28.93■■■□□ 2.22
SSBP3-204ENST00000371320 XIAPP98170 497 aa28.93■■■□□ 2.22
SSBP3-204ENST00000371320 TRPC7Q9HCX4 862 aa28.93■■■□□ 2.22
SSBP3-204ENST00000371320 POLR3BQ9NW08 1133 aaPredicted RBP28.93■■■□□ 2.22
SSBP3-204ENST00000371320 PHF24Q9UPV7 400 aa28.93■■■□□ 2.22
SSBP3-204ENST00000371320 STX16-NPEPL1H3BU86 382 aa28.93■■■□□ 2.22
SSBP3-204ENST00000371320 KDELR3O43731 214 aa28.93■■■□□ 2.22
SSBP3-204ENST00000371320 SCNN1BP51168 640 aa28.93■■■□□ 2.22
SSBP3-204ENST00000371320 PDAP1Q13442 181 aaKnown RBP28.93■■■□□ 2.22
SSBP3-204ENST00000371320 MAPRE2Q15555 327 aa28.93■■■□□ 2.22
SSBP3-204ENST00000371320 TCTN1Q2MV58 587 aa28.93■■■□□ 2.22
SSBP3-204ENST00000371320 EML3Q32P44 896 aa28.93■■■□□ 2.22
SSBP3-204ENST00000371320 SFT2D3Q587I9 215 aa28.93■■■□□ 2.22
SSBP3-204ENST00000371320 CLEC6AQ6EIG7 209 aa28.93■■■□□ 2.22
SSBP3-204ENST00000371320 RNF148Q8N7C7 305 aa28.93■■■□□ 2.22
SSBP3-204ENST00000371320 RMDN1Q96DB5 314 aa28.93■■■□□ 2.22
SSBP3-204ENST00000371320 AARSD1Q9BTE6 412 aaKnown RBP28.93■■■□□ 2.22
SSBP3-204ENST00000371320 PPP1R12CQ9BZL4 782 aa28.93■■■□□ 2.22
SSBP3-204ENST00000371320 EBF3Q9H4W6 596 aa28.93■■■□□ 2.22
SSBP3-204ENST00000371320 GPBP1L1Q9HC44 474 aaPredicted RBP28.93■■■□□ 2.22
SSBP3-204ENST00000371320 NLE1Q9NVX2 485 aaPredicted RBP28.93■■■□□ 2.22
SSBP3-204ENST00000371320 SUFUQ9UMX1 484 aa28.93■■■□□ 2.22
SSBP3-204ENST00000371320 PSMD13Q9UNM6 376 aa28.93■■■□□ 2.22
SSBP3-204ENST00000371320 PSMD12O00232 456 aaPredicted RBP28.92■■■□□ 2.22
SSBP3-204ENST00000371320 KIF3CO14782 793 aa28.92■■■□□ 2.22
SSBP3-204ENST00000371320 CASQ2O14958 399 aaPredicted RBP28.92■■■□□ 2.22
SSBP3-204ENST00000371320 ZNF37AP17032 561 aaPredicted RBP28.92■■■□□ 2.22
SSBP3-204ENST00000371320 MSX2P35548 267 aaPredicted RBP28.92■■■□□ 2.22
SSBP3-204ENST00000371320 RGRP47804 291 aa28.92■■■□□ 2.22
SSBP3-204ENST00000371320 STX5Q13190 355 aa28.92■■■□□ 2.22
SSBP3-204ENST00000371320 HECTD3Q5T447 861 aa28.92■■■□□ 2.22
SSBP3-204ENST00000371320 APLFQ8IW19 511 aaPredicted RBP28.92■■■□□ 2.22
SSBP3-204ENST00000371320 PDZD8Q8NEN9 1154 aa28.92■■■□□ 2.22
SSBP3-204ENST00000371320 UTP6Q9NYH9 597 aaKnown RBP28.92■■■□□ 2.22
SSBP3-204ENST00000371320 SPO11Q9Y5K1 396 aa28.92■■■□□ 2.22
SSBP3-204ENST00000371320 CLDN11O75508 207 aa28.92■■■□□ 2.22
SSBP3-204ENST00000371320 UBTFL6P0CB48 400 aaPredicted RBP28.92■■■□□ 2.22
SSBP3-204ENST00000371320 RPL17P18621 184 aaKnown RBP28.92■■■□□ 2.22
SSBP3-204ENST00000371320 TUFMP49411 452 aaKnown RBP28.92■■■□□ 2.22
SSBP3-204ENST00000371320 FASTKQ14296 549 aaKnown RBP28.92■■■□□ 2.22
SSBP3-204ENST00000371320 TYSND1Q2T9J0 566 aa28.92■■■□□ 2.22
SSBP3-204ENST00000371320 PTGR2Q8N8N7 351 aaPredicted RBP28.92■■■□□ 2.22
SSBP3-204ENST00000371320 EXOC2Q96KP1 924 aa28.92■■■□□ 2.22
SSBP3-204ENST00000371320 INTS10Q9NVR2 710 aaKnown RBP28.92■■■□□ 2.22
SSBP3-204ENST00000371320 C6orf203Q9P0P8 240 aaPredicted RBP28.92■■■□□ 2.22
SSBP3-204ENST00000371320 CCDC189A1A4V9 331 aa28.91■■■□□ 2.22
SSBP3-204ENST00000371320 ZNF840PA6NDX5 716 aa28.91■■■□□ 2.22
SSBP3-204ENST00000371320 INSIG1O15503 277 aa28.91■■■□□ 2.22
SSBP3-204ENST00000371320 PRSS56P0CW18 603 aa28.91■■■□□ 2.22
SSBP3-204ENST00000371320 OR1D2P34982 312 aa28.91■■■□□ 2.22
SSBP3-204ENST00000371320 ZNF140P52738 457 aaPredicted RBP28.91■■■□□ 2.22
SSBP3-204ENST00000371320 AGKQ53H12 422 aa28.91■■■□□ 2.22
SSBP3-204ENST00000371320 RAB44Q7Z6P3 723 aaPredicted RBP28.91■■■□□ 2.22
SSBP3-204ENST00000371320 NSMCE3Q96MG7 304 aa28.91■■■□□ 2.22
SSBP3-204ENST00000371320 PRICKLE1Q96MT3 831 aaPredicted RBP28.91■■■□□ 2.22
SSBP3-204ENST00000371320 UBA6A0AVT1 1052 aaPredicted RBP28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms